BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0085.0019.p (217 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01047229.1| nuclease (SNase-like) [Nitrobacter sp. Nb-311... 234 5e-60 ref|YP_534529.1| nuclease [Rhodopseudomonas palustris BisB18] >g... 220 9e-56 ref|YP_001236732.1| putative nuclease-like protein [Bradyrhizobi... 217 8e-55 ref|YP_488222.1| SNase-like nuclease [Rhodopseudomonas palustris... 213 1e-53 ref|NP_946144.1| nuclease [Rhodopseudomonas palustris CGA009] >g... 212 4e-53 >ref|ZP_01047229.1| nuclease (SNase-like) [Nitrobacter sp. Nb-311A] gb|EAQ34811.1| nuclease (SNase-like) [Nitrobacter sp. Nb-311A] Length = 245 Score = 234 bits (598), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 108/214 (50%), Positives = 151/214 (70%), Gaps = 3/214 (1%) Query: 3 QIVDADTVYIGQTKIRFNGIDAPETDQVCLDSAGKTWTCGIEARERLRTFSQDREWSCEL 62 IVD DTV IG+ KIR NG+DAPETDQ+CLD+ GK W CG+ +R+ L FS+ R WSC++ Sbjct: 34 HIVDGDTVEIGEKKIRLNGLDAPETDQLCLDAKGKKWACGVASRDALAAFSKTRPWSCDV 93 Query: 63 NGSDIYRRSLGFCTVGAENVSRWLVQNGWALAFRRYSTEYVPDEDLAREHHRGLWSGAFV 122 +G+D Y R L C++ +N+++W+V++GWALAF +YS YV +E AR+ GLWSGAF+ Sbjct: 94 SGNDRYDRFLASCSIAGQNINQWMVRHGWALAFVKYSDRYVAEETKARDTQAGLWSGAFI 153 Query: 123 APWDWRHRNSSTVILGALAVPTTAQRALISNSLANPIRPVGNCLIKGNLSSAPQCIYHVP 182 APW WR RN + + GA++VPT AQ L+ S+++ P C IK +S+ +CIYH+ Sbjct: 154 APWGWRSRNKQSAVFGAVSVPTNAQELLL-GSVSSQEAPDPACTIKAGVSNG-ECIYHLA 211 Query: 183 GGRFYDRLSMQPSSLRRWFCTEAEAQAAGCRKSK 216 G R+Y +++M RRWFC+E EA+AAGCR K Sbjct: 212 GDRWYAKMNMDKPD-RRWFCSEQEAEAAGCRAPK 244 >ref|YP_534529.1| nuclease [Rhodopseudomonas palustris BisB18] gb|ABD90210.1| nuclease (SNase-like) [Rhodopseudomonas palustris BisB18] Length = 241 Score = 220 bits (561), Expect = 9e-56, Method: Compositional matrix adjust. Identities = 100/216 (46%), Positives = 145/216 (67%), Gaps = 1/216 (0%) Query: 1 VPQIVDADTVYIGQTKIRFNGIDAPETDQVCLDSAGKTWTCGIEARERLRTFSQDREWSC 60 VP+I + D V IG ++IR GIDAP DQ+CL+ G+ W+CG+ AR+ L + + WSC Sbjct: 26 VPKIREGDQVTIGSSRIRLGGIDAPSLDQLCLNPKGERWSCGVAARDELVRHAGSKSWSC 85 Query: 61 ELNGSDIYRRSLGFCTVGAENVSRWLVQNGWALAFRRYSTEYVPDEDLAREHHRGLWSGA 120 + +D + RS+G C V E++ +WLVQ+GWALA+ + S +Y D+ +AR+ GLW+GA Sbjct: 86 HIQRTDRFGRSVGRCEVEGEDIQKWLVQSGWALAYAKISHDYDADQKVARDAKAGLWAGA 145 Query: 121 FVAPWDWRHRNSSTVILGALAVPTTAQRALISNSLANPIRPVGNCLIKGNLSSAPQCIYH 180 F+APWDWR RN +T ILGA+ P TA L++ S + P+ P C IKGN++ + CIYH Sbjct: 146 FIAPWDWRVRNKATTILGAVKPPPTANAILLA-SASGPVAPSPECTIKGNVNRSGHCIYH 204 Query: 181 VPGGRFYDRLSMQPSSLRRWFCTEAEAQAAGCRKSK 216 P R+Y ++ M S RWFC+ EA+AAGCR+++ Sbjct: 205 RPQSRWYAKIQMHVSKGTRWFCSVEEAEAAGCRETR 240 >ref|YP_001236732.1| putative nuclease-like protein [Bradyrhizobium sp. BTAi1] gb|ABQ32826.1| putative nuclease-like protein [Bradyrhizobium sp. BTAi1] Length = 241 Score = 217 bits (553), Expect = 8e-55, Method: Compositional matrix adjust. Identities = 100/216 (46%), Positives = 140/216 (64%), Gaps = 1/216 (0%) Query: 1 VPQIVDADTVYIGQTKIRFNGIDAPETDQVCLDSAGKTWTCGIEARERLRTFSQDREWSC 60 +P+I +AD + IG T+IR GIDAP DQ+CL+ G+ WTCG+ AR+ L + + W C Sbjct: 26 IPKIREADGITIGTTRIRLGGIDAPSVDQLCLNKDGERWTCGVAARDELIKHADGKSWVC 85 Query: 61 ELNGSDIYRRSLGFCTVGAENVSRWLVQNGWALAFRRYSTEYVPDEDLAREHHRGLWSGA 120 D R + C V E++ +WLV+NGWALA+R S +Y P+E AR G+W GA Sbjct: 86 HPRAIDRRGRQVARCDVDGEDIQKWLVRNGWALAYRTVSHDYEPEEAEARTAKAGMWQGA 145 Query: 121 FVAPWDWRHRNSSTVILGALAVPTTAQRALISNSLANPIRPVGNCLIKGNLSSAPQCIYH 180 F+APWDWR RN T ILGA P +A+ L++ S + P+ P +C IKGN++SA +CIYH Sbjct: 146 FIAPWDWRVRNKKTTILGATKPPESARNILLA-SASGPVAPSPDCTIKGNVNSAGECIYH 204 Query: 181 VPGGRFYDRLSMQPSSLRRWFCTEAEAQAAGCRKSK 216 P R+Y ++ M S RWFC+ EA+AAGCR+++ Sbjct: 205 TPQSRWYAQIKMHVSKGTRWFCSVEEAEAAGCRETR 240 >ref|YP_488222.1| SNase-like nuclease [Rhodopseudomonas palustris HaA2] gb|ABD09311.1| SNase-like nuclease [Rhodopseudomonas palustris HaA2] Length = 242 Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 99/216 (45%), Positives = 140/216 (64%), Gaps = 1/216 (0%) Query: 1 VPQIVDADTVYIGQTKIRFNGIDAPETDQVCLDSAGKTWTCGIEARERLRTFSQDREWSC 60 VP+I D D V IG +IR GIDAP DQ+CL+ G+ WTCG+ AR+ L + W+C Sbjct: 27 VPKIRDGDHVTIGGARIRLAGIDAPSLDQLCLNPKGERWTCGVAARDALAAHVGGKSWTC 86 Query: 61 ELNGSDIYRRSLGFCTVGAENVSRWLVQNGWALAFRRYSTEYVPDEDLAREHHRGLWSGA 120 + ++ S+ C V E++ +W+V+NGWAL++ R + Y DE LAR GLW GA Sbjct: 87 RVTRTEKNGLSIAKCEVDGEDIQQWMVKNGWALSYVRVARTYDADEKLARAARAGLWQGA 146 Query: 121 FVAPWDWRHRNSSTVILGALAVPTTAQRALISNSLANPIRPVGNCLIKGNLSSAPQCIYH 180 F+APWDWR RNS T +LGA P A+R L++ S + P+ P +C IKGN+++A +CIYH Sbjct: 147 FIAPWDWRVRNSKTAVLGATRPPKNARRILLA-SASGPVAPSPDCTIKGNVNTAGECIYH 205 Query: 181 VPGGRFYDRLSMQPSSLRRWFCTEAEAQAAGCRKSK 216 P R+Y ++ M S RWFC+ EA+AAGCR+++ Sbjct: 206 KPTSRWYAKIKMTISKGTRWFCSVEEAEAAGCRETR 241 >ref|NP_946144.1| nuclease [Rhodopseudomonas palustris CGA009] emb|CAE26235.1| similar to Staphylococcus nuclease (SNase-like) [Rhodopseudomonas palustris CGA009] Length = 273 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 99/216 (45%), Positives = 142/216 (65%), Gaps = 1/216 (0%) Query: 1 VPQIVDADTVYIGQTKIRFNGIDAPETDQVCLDSAGKTWTCGIEARERLRTFSQDREWSC 60 VP+I D D IG+T+IR GIDAP DQ+CL+ G WTCG+ AR+ L + + W+C Sbjct: 58 VPKIRDGDHALIGKTRIRLAGIDAPGVDQLCLNPKGDRWTCGVAARDALAQHTAGKSWTC 117 Query: 61 ELNGSDIYRRSLGFCTVGAENVSRWLVQNGWALAFRRYSTEYVPDEDLAREHHRGLWSGA 120 + D RS+ C V E++ +W+V+NGWALA+ +YS Y +E ARE GLW G+ Sbjct: 118 HVLRVDKAGRSIAKCEVDGEDLGQWMVKNGWALAYVQYSHAYEGEEKAAREAKIGLWQGS 177 Query: 121 FVAPWDWRHRNSSTVILGALAVPTTAQRALISNSLANPIRPVGNCLIKGNLSSAPQCIYH 180 F+APWDWR R++ T ILGA P A+R L++ S + P+ P +C IKGN++ + +CIYH Sbjct: 178 FIAPWDWRVRSAKTQILGATKPPKDARRILLA-SASGPVAPSPDCTIKGNVNKSGECIYH 236 Query: 181 VPGGRFYDRLSMQPSSLRRWFCTEAEAQAAGCRKSK 216 P R+Y ++ M+ S RWFC+ EA+AAGCR+++ Sbjct: 237 KPTSRWYAQIRMKISKGTRWFCSVEEAEAAGCRETR 272