BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0085.0017.p (177 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002361854.1| hypothetical protein Msil_1542 [Methylocella... 178 4e-43 ref|YP_001417142.1| hypothetical protein Xaut_2242 [Xanthobacter... 133 1e-29 emb|CAD31543.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A] 114 5e-24 ref|YP_002544249.1| hypothetical protein Arad_2034 [Agrobacteriu... 104 7e-21 ref|YP_002984823.1| hypothetical protein Rleg_6823 [Rhizobium le... 95 5e-18 >ref|YP_002361854.1| hypothetical protein Msil_1542 [Methylocella silvestris BL2] gb|ACK50492.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 275 Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 88/177 (49%), Positives = 123/177 (69%), Gaps = 4/177 (2%) Query: 1 VLDVAGSRSRSLFAKCNPGDGTGLSEWTNNISVARQRWIESFRKPAQQAIDNGVSPARAT 60 +LD A +RS S+FA+CNPGDG GLSEWT N ++AR+RW SF++P +AI+ + A + Sbjct: 102 LLDPATARSHSIFARCNPGDGAGLSEWTANPALARKRWTTSFQQPVSEAIERSLGAAPSL 161 Query: 61 SSPIMGAIQDIAIGEFAGSARQNIGKTLYIISDMIESTKDYSQYPRSGDLSYQRFKQSPA 120 SPIM AIQDIAI F G A + + L +ISDMIE+ DYSQY + DLSY R+K+S A Sbjct: 162 LSPIMAAIQDIAIERFTGRAAETSTRRLIVISDMIENDPDYSQY--NVDLSYARYKKSTA 219 Query: 121 YRRYWTELHDATIFVRLVSRQVNGKPVVDDRQLMQFWQEWISDNHGRVGGLKRLQGA 177 Y+++ T+LH A + + V R + K +D L++FW +WI+DN+GR+ + RLQGA Sbjct: 220 YQKFSTDLHAADVSIYYVQRLM--KHPIDATALVRFWSDWIADNNGRLRSVTRLQGA 274 >ref|YP_001417142.1| hypothetical protein Xaut_2242 [Xanthobacter autotrophicus Py2] gb|ABS67485.1| hypothetical protein Xaut_2242 [Xanthobacter autotrophicus Py2] Length = 271 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 69/175 (39%), Positives = 105/175 (60%), Gaps = 6/175 (3%) Query: 2 LDVAGSRSRSLFAKCNPGDGTGLSEWTNNISVARQRWIESFRKPAQQAIDNGVSPARATS 61 LD R LF KCNPGDGT LS + N A++RW+ F +P + + + + + + + Sbjct: 101 LDPRTPGGRILFEKCNPGDGTDLSTLSANPDAAKRRWLSEFDRPLTETLAH-LDASSSAT 159 Query: 62 SPIMGAIQDIAIGEFAGSARQNIGKTLYIISDMIESTKDYSQYPRSGDLSYQRFKQSPAY 121 SP++ IQ IA+ F G+A + + K L ++SDMIE +YSQY GDLSY RFK++ Y Sbjct: 160 SPLLATIQAIAVQRFGGAAARELRKRLIVVSDMIEHGPEYSQY--KGDLSYGRFKKTATY 217 Query: 122 RRYWTELHDATIFVRLVSRQVNGKPVVDDRQLMQFWQEWISDNHGRVGGLKRLQG 176 + T L+ A++ + R KP++D +QFW +WI+D+ G +G K+LQG Sbjct: 218 KATHTNLNGASVDFYYIQRI---KPILDSGAHIQFWLDWIADSSGTLGVAKKLQG 269 >emb|CAD31543.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A] Length = 277 Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 5/167 (2%) Query: 10 RSLFAKCNPGDGTGLSEWTNNISVARQRWIESFRKPAQQAIDNGVSPARATSSPIMGAIQ 69 + L+A+CNPGDG+ + WT+N ++ W E+F KP ++ ++ + ++A SPIM IQ Sbjct: 115 KELYARCNPGDGSTVDVWTSNPGKHQRIWEEAFDKPLKELPEHLPADSQADQSPIMAGIQ 174 Query: 70 DIAIGEFAGSARQNIGKTLYIISDMIESTKDYSQYPRSGDLSYQRFKQSPAYRRYWTELH 129 + + F N+ K L ++SDM+E+T YSQY D Y FK+SPA R+ T+L Sbjct: 175 KLKLSLFDNGMFDNVPKRLVLVSDMMENTPAYSQYKAGAD--YNAFKKSPANSRFRTDLL 232 Query: 130 DATIFVRLVSRQVNGKPVVDDRQLMQFWQEWISDNHGRVGGLKRLQG 176 A + + +R P VD FW +W S+N G + +L+G Sbjct: 233 GADVTILYFNRPERKFPSVDHA---NFWTQWFSENGGNLSDFTKLEG 276 >ref|YP_002544249.1| hypothetical protein Arad_2034 [Agrobacterium radiobacter K84] gb|ACM26323.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 272 Score = 104 bits (259), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 10/166 (6%) Query: 13 FAKCNPGDGTGLSEWTNNISVARQRWIESFRKPAQQAIDNGVSPARATS-SPIMGAIQDI 71 F CNPG G + EWT+N + + RW + F+KP I +S A SPIM AIQ I Sbjct: 113 FHGCNPGSGANVDEWTSNPRLVQARWEKGFQKPLAD-IAGKLSVGEAGKLSPIMAAIQKI 171 Query: 72 AIGEFAGSARQNIGKTLYIISDMIESTKDYSQYPRSGDLSYQRFKQSPAYRRYWTELHDA 131 + FA SA K LYI SDM+E T +S Y R G SYQ+F+ SPA +Y T L Sbjct: 172 NLEVFA-SAAPGTPKHLYIASDMLEHTDAFSNY-RDG-ASYQKFQASPARDKYRTSLDG- 227 Query: 132 TIFVRLVSRQ-VNGKPVVDDRQLMQFWQEWISDNHGRVGGLKRLQG 176 + V++++ Q N K ++D L FW +WI +N+G G RL+G Sbjct: 228 -VMVKIIAFQRPNTKFSMED--LANFWAQWIKNNNGYFDGFVRLEG 270 >ref|YP_002984823.1| hypothetical protein Rleg_6823 [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS59861.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 272 Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 6/164 (3%) Query: 13 FAKCNPGDGTGLSEWTNNISVARQRWIESFRKPAQQAIDNGVSPARATSSPIMGAIQDIA 72 F CNPG G EWT+N + + RW + F+KP ++ S +SPIM IQ I Sbjct: 113 FHGCNPGSGDLADEWTSNPRLIQDRWEKGFQKPLEEIAGRLASGKAGDASPIMAGIQRIN 172 Query: 73 IGEFAGSARQNIGKTLYIISDMIESTKDYSQYPRSGDLSYQRFKQSPAYRRYWTELHDAT 132 + F+ S + L++ SDMIE T +S Y R G ++Y +F++S A ++ T L + Sbjct: 173 LEVFS-SLPAGTPRALFVASDMIEHTPAFSNY-RDG-VAYSKFQKSEARDKFRTSLDGVS 229 Query: 133 IFVRLVSRQVNGKPVVDDRQLMQFWQEWISDNHGRVGGLKRLQG 176 + + L ++ N K +L +FW+EWI+ N+G G RL+G Sbjct: 230 VKI-LAFQRPNLK--FSAEELAEFWKEWITKNNGYFDGFIRLEG 270