BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0085.0016.p (339 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002361853.1| hypothetical protein Msil_1541 [Methylocella... 326 3e-87 ref|YP_001417143.1| putative transmembrane protein [Xanthobacter... 252 5e-65 gb|AEG04130.1| hypothetical protein SinmeB_1205 [Sinorhizobium m... 207 1e-51 ref|YP_771297.1| putative transmembrane protein [Rhizobium legum... 202 8e-50 emb|CAD31542.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [Mesorhizobiu... 201 1e-49 >ref|YP_002361853.1| hypothetical protein Msil_1541 [Methylocella silvestris BL2] gb|ACK50491.1| hypothetical protein Msil_1541 [Methylocella silvestris BL2] Length = 401 Score = 326 bits (836), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 165/291 (56%), Positives = 213/291 (73%), Gaps = 2/291 (0%) Query: 10 LPPGLRSGLLFFAVVLAGAGYIVFSKLRDFSPIVVTTVPVLIMIGYALLLGLARLFRLRD 69 LP L + L FF+VVL G+ YIV +KL F+ VT VPV +M YALL+G AR RLRD Sbjct: 19 LP--LTNALFFFSVVLLGSAYIVMAKLWGFTATSVTFVPVTVMFAYALLIGAARSLRLRD 76 Query: 70 DQSGDNLYYMGFLFTLTSLGVSLYQFSADGGAEQIVRNFGIAIASTIAGIALRILFNQMR 129 DQSGDNLYYMGFLFTLTSLGVSLYQF+A+G AEQIV+NFG+AIASTIAGIALR+ FNQMR Sbjct: 77 DQSGDNLYYMGFLFTLTSLGVSLYQFNANGAAEQIVQNFGVAIASTIAGIALRVFFNQMR 136 Query: 130 RDPIEVEATARLELAQASRKVKVELENTVLEFGSFRRMTQQSLGDALDELKETLGETRKE 189 RDPIEVEATARLELA+ASRKV+ EL+ T+ EF FRR QQ + D +E K + E + Sbjct: 137 RDPIEVEATARLELAEASRKVRRELDYTIQEFSYFRRAAQQMIMDGFEETKLKVDEVGQN 196 Query: 190 LAGEIKDFAVTARQPLEDASKRSGEALNMMNTQATRTFEAMSKQLVDQGDRLTRSTATMI 249 L ++D + +PLE AS++SG ++ M + + E+ + +L D +L+ S + Sbjct: 197 LLSGLEDVTRKSAEPLEAASRKSGMTVDEMTRRIVASLESSALKLSDGSAQLSDSATKVA 256 Query: 250 KAIDTVVGKLTSLQTPEQIIEIKLAPMIQGLSRAVNSFGKSAETQAKAMEE 300 + +D + KL+++QTPEQIIEIKL P++QG+SRAVNSFGKSA+ Q A+ + Sbjct: 257 ETLDVLSAKLSAMQTPEQIIEIKLTPVLQGVSRAVNSFGKSADAQTSAINQ 307 >ref|YP_001417143.1| putative transmembrane protein [Xanthobacter autotrophicus Py2] gb|ABS67486.1| putative transmembrane protein [Xanthobacter autotrophicus Py2] Length = 352 Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 135/314 (42%), Positives = 196/314 (62%), Gaps = 10/314 (3%) Query: 8 RVLPPGLRSGLLFFAVVLAGAGYIVFSKLRDFSPIVVTTVPVLIMIGYALL-LGLARLFR 66 RV+ P L F V+ G +IV +K+ D P VVT VPV IM+ YAL +GL R R Sbjct: 10 RVIAPAL-----FILFVVIGCSFIVTAKILDVRPAVVTLVPVAIMLTYALAQIGL-RAAR 63 Query: 67 LRDDQSGDNLYYMGFLFTLTSLGVSLYQFSADGGAEQIVRNFGIAIASTIAGIALRILFN 126 +RDDQ+GDNLYYMGFL+TLTSLGVSLYQF+ D AE IVRNFGIAI STIAG+ LR++FN Sbjct: 64 IRDDQAGDNLYYMGFLYTLTSLGVSLYQFAGDSSAETIVRNFGIAIGSTIAGVTLRVVFN 123 Query: 127 QMRRDPIEVEATARLELAQASRKVKVELENTVLEFGSFRRMTQQSLGDALDELKETLGET 186 QMRRDP++VE ARLELA+ASR+V+ EL+ TV+E FRR QQ++ +A +EL+ + Sbjct: 124 QMRRDPLDVEQAARLELAEASRRVRRELDGTVVELSHFRRAMQQAVREAFEELQRDVSAA 183 Query: 187 RKELAGEIKDFAVTARQPLEDASKRSGEALNMMNTQATRTFEAMSKQLVDQGDRLTRSTA 246 +++G + + +P+E+ S +S + ++ E +L + GD L T Sbjct: 184 SGKMSGSLSSLTASITKPVEETSTQSAALVASLSRALMEKIEQTGGRLYESGDWLAAHTK 243 Query: 247 TMIKAIDTVVGKLTSLQTPEQIIEIKLAPMIQGLSRAVNSFGKSAETQAKAMEENLRQTQ 306 + K + +L ++Q P+Q++ I++ P++ ++ +V +F +T E R T Sbjct: 244 EVAKELQQTSERLNAVQMPDQVVRIQIEPIVAAMASSVEAFNSKLDTYRIETE---RVTT 300 Query: 307 ALAAALNELMKEIR 320 AL AA ++ + IR Sbjct: 301 ALGAARDDEARRIR 314 >gb|AEG04130.1| hypothetical protein SinmeB_1205 [Sinorhizobium meliloti BL225C] Length = 517 Score = 207 bits (528), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 106/294 (36%), Positives = 178/294 (60%), Gaps = 7/294 (2%) Query: 18 LLFFAVVLAGAGYIVFSKLRDFSPIVVTTVPVLIMIGYALLLGLARLFRLRDDQSGDNLY 77 +LF + GA I F KL + +T +P+ +M Y ++ A L ++Q+GDNLY Sbjct: 18 VLFGTMTFVGALIIWFGKLYGVGTVTITLIPLAMMALYFVISFAAAGLSLHNEQAGDNLY 77 Query: 78 YMGFLFTLTSLGVSLYQFSADGGAEQIVRNFGIAIASTIAGIALRILFNQMRRDPIEVEA 137 YMGFLFTLTSLGVSLYQF+ E +VRNFG+AI+STIAGI+LRILFNQMRRDP+++E Sbjct: 78 YMGFLFTLTSLGVSLYQFTGQASIENVVRNFGVAISSTIAGISLRILFNQMRRDPVDIER 137 Query: 138 TARLELAQASRKVKVELENTVLEFGSFRRMTQQSLGDALDELKETLGETRKELAGEIKDF 197 R +LA+ +R+V+ EL+ + +EF S+RR + Q L + +E+ ++ + + I+ Sbjct: 138 AVRHDLAEMTRRVRTELDTSAMEFSSYRRTSSQMLAEGFEEIARQAEKSGEAVRASIEAM 197 Query: 198 AVTARQPLEDASKRSGEALNMMNTQ-------ATRTFEAMSKQLVDQGDRLTRSTATMIK 250 ++ A + L++ S+R LN + Q R+ MS++L +++ T + + Sbjct: 198 SLQATKSLQETSERLTSTLNTTHEQIISFAERNARSVAEMSEKLKASVEQIEERTNKLAE 257 Query: 251 AIDTVVGKLTSLQTPEQIIEIKLAPMIQGLSRAVNSFGKSAETQAKAMEENLRQ 304 A+D V+ K + ++PE+I++I++ P+++ L V K+ + A + +++ Sbjct: 258 AVDGVIEKFKTSRSPEEILKIEVTPVMEALQTLVADHSKAIDENAATTRDTVKK 311 >ref|YP_771297.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] emb|CAK03213.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 400 Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 111/308 (36%), Positives = 184/308 (59%), Gaps = 1/308 (0%) Query: 18 LLFFAVVLAGAGYIVFSKLRDFSPIVVTTVPVLIMIGYALLLGLARLFRLRDDQSGDNLY 77 +LF + G +I +KL +S VVT VP+L+M Y L L FRL ++Q+GDNLY Sbjct: 18 VLFALTTIGGMVFIWTAKLWGWSTAVVTVVPLLLMATYFLASLLLAGFRLHNEQAGDNLY 77 Query: 78 YMGFLFTLTSLGVSLYQFSADGGAEQIVRNFGIAIASTIAGIALRILFNQMRRDPIEVEA 137 YMGFLFTL+SLGVSLY F+ + + IVRNFGIA+ STIAG+ LRILFNQMRRDP+++E Sbjct: 78 YMGFLFTLSSLGVSLYLFAGETSIDTIVRNFGIAVTSTIAGVTLRILFNQMRRDPLDIER 137 Query: 138 TARLELAQASRKVKVELENTVLEFGSFRRMTQQSLGDALDELKETLGETRKELAGEIKDF 197 +AR ELA+ +R+V+ EL+++ EF ++RR++ Q L + DE+ + +++ I+ Sbjct: 138 SARHELAEMTRRVRTELDSSAREFSNYRRVSNQMLSEGFDEIARQAEKNGEDIRKAIESL 197 Query: 198 AVTARQPLEDASKRSGEALNMMNTQATRTFEAMSKQLVDQGDRLTRSTATMIKAIDTVVG 257 + A +P+++A+++ + N + + +L + +L+ A+++V Sbjct: 198 SKEAIKPIQEAAQQLSAIIESHNKTINDSNNNAAAKLTETTGQLSTIIDRFGGAVESVGT 257 Query: 258 KLTSLQTPEQIIEIKLAPMIQGLSRAVNSFGKSAETQAKAMEENLRQTQALAAALNELMK 317 +L ++ PE +I+I+L P+I+ + + K E + ++ QT+ L L + Sbjct: 258 RLGEIRAPEDVIKIELTPVIESIREMTEAHLKRMEADTERGRSHIEQTKEALQPLQTLEE 317 Query: 318 EI-RTENA 324 ++ R NA Sbjct: 318 KLDRIANA 325 >emb|CAD31542.1| HYPOTHETICAL TRANSMEMBRANE PROTEIN [Mesorhizobium loti R7A] Length = 420 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 114/321 (35%), Positives = 181/321 (56%), Gaps = 10/321 (3%) Query: 19 LFFAVVLAGAGYIVFSKLRDFSPIVVTTVPVLIMIGYALLLGLARLFRLRDDQSGDNLYY 78 + A+ + G +I +K SP++ +TVP+ IMIGY R+ D+Q+GDNLYY Sbjct: 18 FYIALTVGGCVFIAVTKTAGISPVISSTVPIGIMIGYFAFSWYVGKLRVHDEQTGDNLYY 77 Query: 79 MGFLFTLTSLGVSLYQFSADGGAEQIVRNFGIAIASTIAGIALRILFNQMRRDPIEVEAT 138 MGFLFTL+SLG SLYQF D ++IVRNFGIA+ STI GIALRI NQ+RRDP +VE Sbjct: 78 MGFLFTLSSLGTSLYQFGTDASTDEIVRNFGIAVTSTITGIALRIFHNQVRRDPADVERA 137 Query: 139 ARLELAQASRKVKVELENTVLEFGSFRRMTQQSLGDALDELKETLGETRKELAGEIKDFA 198 AR ELA +R+V+ E+E+ EF FRR+ Q L + DE+ + ++ + A Sbjct: 138 ARHELADMTRRVRTEMESVAREFADFRRVCNQMLEEGFDEIARQAEKNGDQVRQAFEGMA 197 Query: 199 VTARQPLEDASKRSGEALNMMNTQATRTFEAMSKQLVDQGDRLTRSTATMIKAI------ 252 A +P+++ S++ ++L+ + F +++++ L + A+M I Sbjct: 198 AKAIKPVQETSEKIAKSLDDTFGRIESRFSGVAEKVDTVAASLDTANASMAGTISKFEAQ 257 Query: 253 -DTVVGKLTSLQTPEQIIEIKLAPMIQGLSRAVNSFGKSAETQAKAMEE---NLRQTQAL 308 D V GKL ++ P+++++ + +++ L+ +V F + AE +K E L T Sbjct: 258 ADIVAGKLANVVIPDEVLKTDVVTVLKVLAASVGRFTERAEALSKEQGERTDKLSDTVLR 317 Query: 309 AAALNELMKEIRTENAERYAT 329 AA +L+ E + AE+ A+ Sbjct: 318 MAAHQKLLLERLEKQAEQNAS 338