BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0085.0012.p         (131 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_443998.1| hypothetical 14.7 kDa protein [Sinorhizobium fr...   145   2e-33
ref|ZP_03524840.1| hypothetical protein RetlG_29034 [Rhizobium e...   142   2e-32
ref|YP_002963732.1| hypothetical protein MexAM1_META1p2689 [meth...   139   2e-31
ref|YP_567172.1| hypothetical protein RPD_0031 [Rhodopseudomonas...   132   2e-29
ref|ZP_01881528.1| hypothetical protein RTM1035_00570 [Roseovari...   130   8e-29

>ref|NP_443998.1| hypothetical 14.7 kDa protein [Sinorhizobium fredii NGR234]
 sp|P55587.1|Y4OB_RHISN RecName: Full=Uncharacterized protein y4oB
 gb|AAB91795.1| conserved hypothetical 14.7 kDa protein [Sinorhizobium fredii
           NGR234]
          Length = 129

 Score =  145 bits (366), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/114 (64%), Positives = 87/114 (76%), Gaps = 3/114 (2%)

Query: 18  AALRAFFGIAEKWGLSTEEQIKLLGSPPRSTFFKWKKEGGAIPADTVERLSHVLGIHKCL 77
           A L AFF IA++W LS ++QIKLLGSP RSTFFKWKK GG +PADTVERLSH+L I K L
Sbjct: 19  AELEAFFRIADRWRLSADDQIKLLGSPGRSTFFKWKKAGGTLPADTVERLSHILSIWKAL 78

Query: 78  RILFTDDGTSDGWVRRPNQAPFLNGLSAVEFMTTTGHVADVFRVRSYLDAQRGG 131
           RILFT +  +D W+RRPN   F +G SA++ M   G V D++RVR YLDAQRGG
Sbjct: 79  RILFTIEERADDWIRRPND--FFDGASALDTM-LQGRVVDIYRVRQYLDAQRGG 129


>ref|ZP_03524840.1| hypothetical protein RetlG_29034 [Rhizobium etli GR56]
          Length = 109

 Score =  142 bits (358), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 71/112 (63%), Positives = 84/112 (75%), Gaps = 3/112 (2%)

Query: 20  LRAFFGIAEKWGLSTEEQIKLLGSPPRSTFFKWKKEGGAIPADTVERLSHVLGIHKCLRI 79
           + AF G+AE W LSTE+Q+ LLGSP RSTFFKWKKEGG+IP DTVER+SH+L IHK L I
Sbjct: 1   MEAFQGLAELWELSTEDQLLLLGSPGRSTFFKWKKEGGSIPRDTVERVSHLLAIHKALEI 60

Query: 80  LFTDDGTSDGWVRRPNQAPFLNGLSAVEFMTTTGHVADVFRVRSYLDAQRGG 131
           L  D   +D W+RRPNQ  F  G SA++ M   G V D+FRVR Y+DAQRGG
Sbjct: 61  LLPDSRAADTWIRRPNQ--FFRGQSALDVM-RGGQVMDIFRVRQYVDAQRGG 109


>ref|YP_002963732.1| hypothetical protein MexAM1_META1p2689 [methylobacterium extorquens
           AM1]
 gb|ACS40455.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 129

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/112 (60%), Positives = 85/112 (75%), Gaps = 3/112 (2%)

Query: 20  LRAFFGIAEKWGLSTEEQIKLLGSPPRSTFFKWKKEGGAIPADTVERLSHVLGIHKCLRI 79
           L AFF +A++W LS +EQI LLGSP RSTFFKWKKEGG+IP DT ER+SH+L I K LRI
Sbjct: 21  LEAFFAMADRWHLSADEQIALLGSPARSTFFKWKKEGGSIPPDTTERVSHLLSIWKALRI 80

Query: 80  LFTDDGTSDGWVRRPNQAPFLNGLSAVEFMTTTGHVADVFRVRSYLDAQRGG 131
           LFT D   D W+R PN+  + +G SA++ M  +G  AD+++VR YLDAQRGG
Sbjct: 81  LFTVDERGDEWIRAPNE--YFDGASALDVM-LSGKFADLYKVRIYLDAQRGG 129


>ref|YP_567172.1| hypothetical protein RPD_0031 [Rhodopseudomonas palustris BisB5]
 gb|ABE37271.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 128

 Score =  132 bits (332), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/122 (56%), Positives = 84/122 (68%), Gaps = 4/122 (3%)

Query: 10  ERRQNDAEAALRAFFGIAEKWGLSTEEQIKLLGSPPRSTFFKWKKEGGAIPADTVERLSH 69
           E  ++   A L AFF +AE+W LS EEQI LLGSP RSTFFKWKKEG  +PADT ERLSH
Sbjct: 11  EAERSKIPAELEAFFEVAERWRLSAEEQIVLLGSPGRSTFFKWKKEGATLPADTRERLSH 70

Query: 70  VLGIHKCLRILFTDDGTSDGWVRRPNQAPFLNGLSAVEFMTTTGHVADVFRVRSYLDAQR 129
           +LGI K LRILFT D   + W+R  N+  + +G SA++ M     +  + RVR YLDAQR
Sbjct: 71  ILGIWKSLRILFTQDDRGEAWIRAKNR--YFDGASAIDVMLE--GMVGLIRVRRYLDAQR 126

Query: 130 GG 131
           GG
Sbjct: 127 GG 128


>ref|ZP_01881528.1| hypothetical protein RTM1035_00570 [Roseovarius sp. TM1035]
 gb|EDM30110.1| hypothetical protein RTM1035_00570 [Roseovarius sp. TM1035]
          Length = 109

 Score =  130 bits (326), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 84/112 (75%), Gaps = 3/112 (2%)

Query: 20  LRAFFGIAEKWGLSTEEQIKLLGSPPRSTFFKWKKEGGAIPADTVERLSHVLGIHKCLRI 79
           + AF  +AE W LST+EQI LLGSP RSTFFKWKK GG +P DT+ER+SH+LGI+K L+I
Sbjct: 1   MDAFSRLAEDWELSTDEQITLLGSPGRSTFFKWKKSGGNLPHDTIERISHLLGIYKSLQI 60

Query: 80  LFTDDGTSDGWVRRPNQAPFLNGLSAVEFMTTTGHVADVFRVRSYLDAQRGG 131
           +  +   +DGW+++PN   F +  SA++ M   G+V D+++VR YLDAQRGG
Sbjct: 61  VLPNPEAADGWIKKPNA--FFDDRSALDVM-LGGNVVDIYKVREYLDAQRGG 109