BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0085.0005.p         (175 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001206037.1| hypothetical protein BRADO4060 [Bradyrhizobi...   251   3e-65
ref|YP_001240378.1| hypothetical protein BBta_4436 [Bradyrhizobi...   216   8e-55
gb|ABV24042.1| styrene monooxygenase subunit B [uncultured bacte...   141   4e-32
ref|YP_488101.1| flavin reductase-like, FMN-binding [Rhodopseudo...   135   3e-30
dbj|BAD08312.1| hydroxylase small component [Bacillus sp. JF8]        117   6e-25

>ref|YP_001206037.1| hypothetical protein BRADO4060 [Bradyrhizobium sp. ORS 278]
 emb|CAL77812.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 175

 Score =  251 bits (641), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 119/175 (68%), Positives = 143/175 (81%)

Query: 1   MNPHPDPASFRAAAARFPTGVTVVASIDRDGTPVGMTANSFTPVSTKPPTVLVSVMRGRT 60
           M+ HPDPASFRAAA+RF TGVTVV S   DG PVGMTANSFT VS +PPTVLVS+ RGRT
Sbjct: 1   MSHHPDPASFRAAASRFSTGVTVVTSSGDDGAPVGMTANSFTTVSMQPPTVLVSLKRGRT 60

Query: 61  WQAIMDSKRYAVNVLHAEDLALCAHFSGGPRAEGSPSLVKREEFPVLSQAIAQFACDVVR 120
           WQA+  ++RYAVNVL A+D+A+  HF+G P A+G+P+L  RE F +L QAIAQF C+VV 
Sbjct: 61  WQAVSATRRYAVNVLAADDVAIGRHFAGAPLAQGTPTLEAREGFFLLPQAIAQFGCEVVN 120

Query: 121 SIDVADHTLFIGEVRWCRQRDGSPLTFYPSRFCNGLGAAIMPAETVAYPADGWAI 175
           ++++ADHTLFIGEVRWCR RDG PL FY SRF NGLGA I+PA+ +AYPA+GW I
Sbjct: 121 AVEIADHTLFIGEVRWCRHRDGLPLAFYASRFRNGLGAEILPADAMAYPAEGWTI 175


>ref|YP_001240378.1| hypothetical protein BBta_4436 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36472.1| hypothetical protein BBta_4436 [Bradyrhizobium sp. BTAi1]
          Length = 175

 Score =  216 bits (551), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 112/175 (64%), Positives = 140/175 (80%)

Query: 1   MNPHPDPASFRAAAARFPTGVTVVASIDRDGTPVGMTANSFTPVSTKPPTVLVSVMRGRT 60
           M+ HPD ASFRAAA+RF TGVTVV S   DG  VGMTANSFT VS +PPTVLVS+ RGRT
Sbjct: 1   MSHHPDAASFRAAASRFSTGVTVVTSRGADGAAVGMTANSFTTVSMQPPTVLVSLKRGRT 60

Query: 61  WQAIMDSKRYAVNVLHAEDLALCAHFSGGPRAEGSPSLVKREEFPVLSQAIAQFACDVVR 120
           WQA+ +++RYAVNVL A+D+A+  HF+G P A+G+P+L + + F +L QAIAQF C VV 
Sbjct: 61  WQAVSETRRYAVNVLAADDVAIGRHFAGTPLAQGTPALDEHDGFLLLPQAIAQFGCAVVN 120

Query: 121 SIDVADHTLFIGEVRWCRQRDGSPLTFYPSRFCNGLGAAIMPAETVAYPADGWAI 175
           ++++ADHTLFIGEVRWCR +DG PL FY SRF NG+GA I P++ +AYPA+GW I
Sbjct: 121 AVEIADHTLFIGEVRWCRHQDGLPLAFYASRFRNGVGAEISPSDALAYPAEGWTI 175


>gb|ABV24042.1| styrene monooxygenase subunit B [uncultured bacterium]
          Length = 160

 Score =  141 bits (355), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/155 (49%), Positives = 96/155 (61%), Gaps = 1/155 (0%)

Query: 6   DPASFRAAAARFPTGVTVVASIDRDGTPVGMTANSFTPVSTKPPTVLVSVMRGRTWQAIM 65
           DP +FR AA+RF TGV ++ ++D  G   GMTANSF  +S  PPTVLVSV  GR  +A+ 
Sbjct: 5   DPLAFRQAASRFATGVALLTALDSHGEVCGMTANSFVTISLSPPTVLVSVKPGRMHEAMS 64

Query: 66  DSKRYAVNVLHAEDLALCAHFSGGPRAEGSPSLVKREEFPVLSQAIAQFACDVVRSIDVA 125
            S+RY VNVL     AL  HF+G PR +  P     E  P LS  +A FAC+V R+ID++
Sbjct: 65  ASRRYGVNVLPEYANALSRHFAGRPR-QAHPDYEIVEGLPRLSNCVAFFACEVTRTIDIS 123

Query: 126 DHTLFIGEVRWCRQRDGSPLTFYPSRFCNGLGAAI 160
           DHTLFI EV  C   D  PL F+ SR+  G G  +
Sbjct: 124 DHTLFIAEVSGCDYCDSLPLVFFSSRYHLGPGKPV 158


>ref|YP_488101.1| flavin reductase-like, FMN-binding [Rhodopseudomonas palustris
           HaA2]
 gb|ABD09190.1| Flavin reductase-like, FMN-binding [Rhodopseudomonas palustris
           HaA2]
          Length = 162

 Score =  135 bits (339), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/155 (47%), Positives = 89/155 (57%)

Query: 3   PHPDPASFRAAAARFPTGVTVVASIDRDGTPVGMTANSFTPVSTKPPTVLVSVMRGRTWQ 62
           P  DP  FRAAA+RF TGVTV+ ++DRDG   GMT NSF  V+  PPTVL     GRT  
Sbjct: 2   PRADPERFRAAASRFATGVTVITALDRDGEVCGMTVNSFVTVTLSPPTVLFLAKPGRTRA 61

Query: 63  AIMDSKRYAVNVLHAEDLALCAHFSGGPRAEGSPSLVKREEFPVLSQAIAQFACDVVRSI 122
           AI  S RY VNVL     AL +HF+G   A         +  P L   +A FAC +VR I
Sbjct: 62  AITASGRYGVNVLADTAAALSSHFAGRGAARHDLRYEWTDALPRLPDCLAFFACSLVRQI 121

Query: 123 DVADHTLFIGEVRWCRQRDGSPLTFYPSRFCNGLG 157
           ++ DH + I EV  C  RD +PL F+ SR+  G G
Sbjct: 122 ELGDHLMLIAEVTACDHRDDAPLVFFGSRYHAGAG 156


>dbj|BAD08312.1| hydroxylase small component [Bacillus sp. JF8]
          Length = 160

 Score =  117 bits (293), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 88/149 (59%), Gaps = 4/149 (2%)

Query: 6   DPASFRAAAARFPTGVTVVASIDRDGTPVGMTANSFTPVSTKPPTVLVSV-MRGRTWQAI 64
           D   FR    RF TG+T+V +++ D    GMTAN+F  VS  PP VLVS+  + +  Q +
Sbjct: 4   DKREFRNTLGRFATGITIVTTVEEDKVH-GMTANAFLSVSLDPPLVLVSIDHKAKMHQLL 62

Query: 65  MDSKRYAVNVLHAEDLALCAHFSGGPRAEGSPSLVKREEFPVLSQAIAQFACDVVRSIDV 124
             +  Y +++L  +  A+  HF+G P+ E +P    +E FP +  +IAQ AC++V     
Sbjct: 63  PKTHMYGISILREDQEAVSQHFAGRPQ-ENAPQFFWKENFPFIKNSIAQLACEIVDEHPA 121

Query: 125 ADHTLFIGEVRWCR-QRDGSPLTFYPSRF 152
            DHTL+IG+V+W   + +G+PL FY  ++
Sbjct: 122 GDHTLYIGQVKWLSYEEEGNPLLFYAGKY 150