BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0085.0002.p (422 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767358.1| transporter [Bradyrhizobium japonicum USDA 110]... 693 0.0 ref|YP_003675169.1| major facilitator superfamily protein [Methy... 492 e-137 ref|YP_004750927.1| putative transporter [Collimonas fungivorans... 491 e-137 ref|YP_003776432.1| transporter transmembrane protein [Herbaspir... 484 e-134 ref|ZP_03629932.1| major facilitator superfamily MFS_1 [bacteriu... 471 e-130 >ref|NP_767358.1| transporter [Bradyrhizobium japonicum USDA 110] dbj|BAC45983.1| bll0718 [Bradyrhizobium japonicum USDA 110] Length = 423 Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/423 (81%), Positives = 392/423 (92%), Gaps = 1/423 (0%) Query: 1 MSDQTIAAPIDDDQ-QERGFSRYQSFLIALLAFTQFTLILDFIIMSPLGAILMPSLNITA 59 M++QT+AAPIDD Q ++RGFSRYQ+ LIALLAFTQFT+ILDFIIMSPLGAILMP+L+ITA Sbjct: 1 MTEQTLAAPIDDQQDRQRGFSRYQALLIALLAFTQFTIILDFIIMSPLGAILMPALDITA 60 Query: 60 GQFGVAVSAYAFAAGISGVLAAGFADRFDRKRLLLFFYVGFVLGTVLCALAQNFHVLLLG 119 QFGVAVSAYAF+AG+SG+LAAGFADRFDRKRLLLFFYVGF LGT+LCA+AQ +HVLLLG Sbjct: 61 TQFGVAVSAYAFSAGLSGILAAGFADRFDRKRLLLFFYVGFTLGTLLCAMAQTYHVLLLG 120 Query: 120 RIVTGIFGGVIGSVVLAIVTDLFPLQQRGRAMGVLQTAFAASQVLGVPAGLFLANHWNWH 179 RIVTG+FGGVIGSVVLAI+TDLFPL RGR MG +QTAFAASQVLG+PAGLFLANHWNWH Sbjct: 121 RIVTGLFGGVIGSVVLAIITDLFPLHLRGRVMGFVQTAFAASQVLGIPAGLFLANHWNWH 180 Query: 180 ICFVAIVGLSIAAIAAIAIAMQPVDAHLKLQHDSNPFRHLIATVGQPRYTLAFLVTTLLA 239 +CF AIVGLSIAAIA IA AM+PVDAHL+L+ D NPF HLIATV Q RYTLAF VTTLLA Sbjct: 181 VCFAAIVGLSIAAIAIIAFAMEPVDAHLRLKQDRNPFHHLIATVAQKRYTLAFAVTTLLA 240 Query: 240 TGGFMLMPFGSAFTVHNLGIDIVHLPTIYLVSGLFSIIIGPLVGRASDAFGKYPTFAFGC 299 TGG+MLMPF SA+TV+NLGID++HLPTIYLVSGLFSI+ GPLVGRASDAFGKYPTF FG Sbjct: 241 TGGYMLMPFSSAYTVNNLGIDMLHLPTIYLVSGLFSIVTGPLVGRASDAFGKYPTFVFGS 300 Query: 300 VVTVIMVLIYTNLGHVSLLTAIVVNVLMFIGIFSRMIPSQALMSAIPDASQRGSFSAVSA 359 VV+VIMVLIYT+LGHVSL TAI+VNVLMF+GIFSRMIPSQALMSAIPD SQRGSFSA+SA Sbjct: 301 VVSVIMVLIYTHLGHVSLATAILVNVLMFVGIFSRMIPSQALMSAIPDPSQRGSFSAISA 360 Query: 360 SVQQLSGGLGSVFAAAIIAENPDGSLLHFDRLGYIVVATTIISMIAMYFVQRPIARRAGR 419 S+QQLSGGLGS+ A AIIA+ PDGSL+HFDR+GY+VVA+ I+S++AMYFVQ+ +A RAG+ Sbjct: 361 SLQQLSGGLGSMLAGAIIAQAPDGSLIHFDRIGYVVVASAIVSLVAMYFVQKAVAERAGK 420 Query: 420 RIV 422 R+V Sbjct: 421 RVV 423 >ref|YP_003675169.1| major facilitator superfamily protein [Methylotenera versatilis 301] gb|ADI30592.1| major facilitator superfamily MFS_1 [Methylotenera versatilis 301] Length = 419 Score = 492 bits (1267), Expect = e-137, Method: Compositional matrix adjust. Identities = 245/406 (60%), Positives = 307/406 (75%) Query: 12 DDQQERGFSRYQSFLIALLAFTQFTLILDFIIMSPLGAILMPSLNITAGQFGVAVSAYAF 71 D QQ+ F+RYQ F++ LLAF QF++ILDF+IMSPLGA++MP++ I+ QFG+ VSAYAF Sbjct: 5 DIQQKPEFTRYQIFVMGLLAFLQFSVILDFMIMSPLGALIMPAMEISPRQFGLIVSAYAF 64 Query: 72 AAGISGVLAAGFADRFDRKRLLLFFYVGFVLGTVLCALAQNFHVLLLGRIVTGIFGGVIG 131 +AGISG+L AGFADR+DRK++LL FY GFV TV C LAQ F +LLL RIVTGIFGGVIG Sbjct: 65 SAGISGLLMAGFADRYDRKKILLVFYTGFVAATVWCGLAQTFPMLLLARIVTGIFGGVIG 124 Query: 132 SVVLAIVTDLFPLQQRGRAMGVLQTAFAASQVLGVPAGLFLANHWNWHICFVAIVGLSIA 191 SVVLAI TDLF Q RGR MGV+QTAFAASQVLG+P GL+L+N W WH F+A+ Sbjct: 125 SVVLAIATDLFAPQLRGRVMGVIQTAFAASQVLGLPVGLYLSNRWTWHAPFLAMAAFGAI 184 Query: 192 AIAAIAIAMQPVDAHLKLQHDSNPFRHLIATVGQPRYTLAFLVTTLLATGGFMLMPFGSA 251 I MQPV HLK + + F HL+ T+ PR+ AF T LL TGGFMLMPF S Sbjct: 185 GGIIIVWRMQPVVGHLKAPQEHSAFTHLLNTLSDPRHLTAFATTALLTTGGFMLMPFSSV 244 Query: 252 FTVHNLGIDIVHLPTIYLVSGLFSIIIGPLVGRASDAFGKYPTFAFGCVVTVIMVLIYTN 311 FTV+NLG+ I HLPTIYL++GL +I +GPLVG+ +D FGK P F G +VT+IMV+IYT+ Sbjct: 245 FTVNNLGVSIEHLPTIYLITGLCTIFVGPLVGKVADKFGKIPVFMAGSIVTMIMVMIYTH 304 Query: 312 LGHVSLLTAIVVNVLMFIGIFSRMIPSQALMSAIPDASQRGSFSAVSASVQQLSGGLGSV 371 LG V T I+VNVLMFIGIFSRMIP QAL++++P+ ++RGSF+AVSAS+QQ +GG S+ Sbjct: 305 LGTVPFTTVIIVNVLMFIGIFSRMIPFQALVTSVPETTKRGSFNAVSASIQQFAGGFASI 364 Query: 372 FAAAIIAENPDGSLLHFDRLGYIVVATTIISMIAMYFVQRPIARRA 417 A I+A DG L HF +GYIVV TTI++ I +F+Q+ I +RA Sbjct: 365 LAGHIVAIGADGKLQHFPWVGYIVVGTTIVTAILTWFIQQGIQKRA 410 >ref|YP_004750927.1| putative transporter [Collimonas fungivorans Ter331] gb|AEK60104.1| putative transporter [Collimonas fungivorans Ter331] Length = 489 Score = 491 bits (1264), Expect = e-137, Method: Compositional matrix adjust. Identities = 237/400 (59%), Positives = 308/400 (77%) Query: 12 DDQQERGFSRYQSFLIALLAFTQFTLILDFIIMSPLGAILMPSLNITAGQFGVAVSAYAF 71 + Q FSRYQ F++ +LAF QF +ILDF++MSPLGA++MP+L I QFG+ VSAYAF Sbjct: 76 NTSQPLQFSRYQKFVVGMLAFLQFAVILDFMLMSPLGAVIMPALAIGPKQFGLVVSAYAF 135 Query: 72 AAGISGVLAAGFADRFDRKRLLLFFYVGFVLGTVLCALAQNFHVLLLGRIVTGIFGGVIG 131 +AG+SG+L AGFADRFDRK+LLLFFY GF+LGT+ C LAQ+F LLL RIVTG+FGGVIG Sbjct: 136 SAGLSGLLTAGFADRFDRKKLLLFFYTGFILGTLWCGLAQSFESLLLARIVTGLFGGVIG 195 Query: 132 SVVLAIVTDLFPLQQRGRAMGVLQTAFAASQVLGVPAGLFLANHWNWHICFVAIVGLSIA 191 SVVLAI TDLFPLQ RGR MG++QTAFAASQVLG+P GL+L+N W+WH+ F+A+ L + Sbjct: 196 SVVLAISTDLFPLQMRGRVMGLIQTAFAASQVLGIPIGLYLSNRWDWHVPFMAMAALGVV 255 Query: 192 AIAAIAIAMQPVDAHLKLQHDSNPFRHLIATVGQPRYTLAFLVTTLLATGGFMLMPFGSA 251 + MQPV AHL + +P+ HL TV +PRY +AF T LL TGGFMLMPF SA Sbjct: 256 GGLFVTWRMQPVTAHLAAPQEHSPWMHLFHTVTEPRYLMAFATTALLTTGGFMLMPFSSA 315 Query: 252 FTVHNLGIDIVHLPTIYLVSGLFSIIIGPLVGRASDAFGKYPTFAFGCVVTVIMVLIYTN 311 + V NLGID+ LPT+YLV+GL +I GP++G+A+D FGK+ F G ++++MVLIYT+ Sbjct: 316 YAVSNLGIDLHSLPTVYLVTGLCTIFFGPMIGKAADTFGKFRVFILGTALSILMVLIYTH 375 Query: 312 LGHVSLLTAIVVNVLMFIGIFSRMIPSQALMSAIPDASQRGSFSAVSASVQQLSGGLGSV 371 LG SL IVVN MF+GIFSRMIP QAL+S++P +QRGSF+A+SAS+QQLSGG+ SV Sbjct: 376 LGPTSLPLLIVVNAFMFVGIFSRMIPFQALVSSVPATTQRGSFNAISASIQQLSGGIASV 435 Query: 372 FAAAIIAENPDGSLLHFDRLGYIVVATTIISMIAMYFVQR 411 A I+ DG L HFD +GY+VV T++++++ ++ +QR Sbjct: 436 VAGHIVTLGADGKLQHFDTVGYVVVGTSLVALMLLWRLQR 475 >ref|YP_003776432.1| transporter transmembrane protein [Herbaspirillum seropedicae SmR1] gb|ADJ64524.1| transporter transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 421 Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust. Identities = 238/400 (59%), Positives = 307/400 (76%) Query: 17 RGFSRYQSFLIALLAFTQFTLILDFIIMSPLGAILMPSLNITAGQFGVAVSAYAFAAGIS 76 +GF+ YQ + LLAF QF +ILDF++MSPLGA++MPS+ IT QFG+ VSAYAF+AG S Sbjct: 14 QGFTPYQKIVTGLLAFLQFAVILDFMLMSPLGALIMPSMQITPQQFGLVVSAYAFSAGAS 73 Query: 77 GVLAAGFADRFDRKRLLLFFYVGFVLGTVLCALAQNFHVLLLGRIVTGIFGGVIGSVVLA 136 G+L AGFADRFDRKRLLLFFY GFVLGTV C LAQ+F LLL RIVTG+FGGVIGS+ LA Sbjct: 74 GLLTAGFADRFDRKRLLLFFYGGFVLGTVWCGLAQSFESLLLARIVTGLFGGVIGSITLA 133 Query: 137 IVTDLFPLQQRGRAMGVLQTAFAASQVLGVPAGLFLANHWNWHICFVAIVGLSIAAIAAI 196 I TDLF RGR MGV+QT+FAASQVLG+P GL+L+N WNWH+ F+A+ L +A + Sbjct: 134 IATDLFAPHLRGRVMGVIQTSFAASQVLGIPIGLYLSNRWNWHVPFLAMAALGLAGGLVV 193 Query: 197 AIAMQPVDAHLKLQHDSNPFRHLIATVGQPRYTLAFLVTTLLATGGFMLMPFGSAFTVHN 256 + MQPVD HL L+ + + + HL T+ +PRY AF T LL TGGFMLMPF SA+ V N Sbjct: 194 LVRMQPVDGHLTLKQEHSAWMHLYHTLAEPRYLTAFATTALLMTGGFMLMPFSSAYLVGN 253 Query: 257 LGIDIVHLPTIYLVSGLFSIIIGPLVGRASDAFGKYPTFAFGCVVTVIMVLIYTNLGHVS 316 LGID+ HLPTIYLV+GL +I GPL+GRA+D GK F FG V+++IMVLIYT+LG V+ Sbjct: 254 LGIDMAHLPTIYLVTGLCTIAFGPLIGRAADKLGKLRVFLFGAVLSIIMVLIYTHLGRVT 313 Query: 317 LLTAIVVNVLMFIGIFSRMIPSQALMSAIPDASQRGSFSAVSASVQQLSGGLGSVFAAAI 376 + + VN ++F+GIFSRMIP QAL+S++P A+QRGSF+A+SAS+QQLSGG+ SV A I Sbjct: 314 VPMIVAVNAVLFLGIFSRMIPFQALVSSVPAATQRGSFNAISASIQQLSGGVASVIAGHI 373 Query: 377 IAENPDGSLLHFDRLGYIVVATTIISMIAMYFVQRPIARR 416 + PDG L HFD +G+++V TT+++ + ++ + R + R Sbjct: 374 VTLAPDGRLGHFDIVGFVIVGTTLLASVLVWRLHRDLQAR 413 >ref|ZP_03629932.1| major facilitator superfamily MFS_1 [bacterium Ellin514] gb|EEF59711.1| major facilitator superfamily MFS_1 [bacterium Ellin514] Length = 421 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 230/413 (55%), Positives = 299/413 (72%), Gaps = 9/413 (2%) Query: 19 FSRYQSFLIALLAFTQFTLILDFIIMSPLGAILMPSLNITAGQFGVAVSAYAFAAGISGV 78 F+RYQ F++A+LAF QFT+ILDF+I+SPLGA+L+ L I +FG+ VS YAF+AG+SG+ Sbjct: 3 FTRYQIFVVAVLAFLQFTIILDFMILSPLGAMLLEELKIPTTKFGLVVSVYAFSAGVSGL 62 Query: 79 LAAGFADRFDRKRLLLFFYVGFVLGTVLCALAQNFHVLLLGRIVTGIFGGVIGSVVLAIV 138 L AGFAD+FDRK+LLLFFY GF+LGTVLC +A N+H LL+ RIVTG+FGGVIGS+ +AI Sbjct: 63 LTAGFADKFDRKKLLLFFYTGFILGTVLCGIASNYHFLLIARIVTGLFGGVIGSITMAIT 122 Query: 139 TDLFPLQQRGRAMGVLQTAFAASQVLGVPAGLFLANHWNWHICFVAIVGLSIAAIAAIAI 198 DLF L+ RGR MG++QTAFAASQV+G+P GLFL+NHW WH F+ I G+ A IAI Sbjct: 123 ADLFALEMRGRVMGIVQTAFAASQVMGLPMGLFLSNHWGWHAPFLMIAGIGTAVGVVIAI 182 Query: 199 AMQPVDAHLKLQHDSNPFRHLIATVGQPRYTLAFLVTTLLATGGFMLMPFGSAFTVHNLG 258 ++P+DAHLK+++D N F HL TV +P Y AF T +LATGGFMLMPFGS FTVHNLG Sbjct: 183 GLKPIDAHLKIKNDRNAFEHLFKTVLRPNYLRAFAATVVLATGGFMLMPFGSTFTVHNLG 242 Query: 259 IDIVHLPTIYLVSGLFSIIIGPLVGRASDAFGKYPTFAFGCVVTVIMVLIYTNLGHVSLL 318 I + LP IY+V+G +II GPL+GR SDA GKYP F G V+ +IMV+IY NLG L Sbjct: 243 ISMDKLPMIYMVTGTCAIIAGPLIGRLSDAIGKYPVFFMGSVLGMIMVVIYCNLGITPLW 302 Query: 319 TAIVVNVLMFIGIFSRMIPSQALMSAIPDASQRGSFSAVSASVQQLSGGLGSVFAAAIIA 378 I+V+VL+FI I +RMI AL+SA+PD RG+F +V+AS QQ +GG+ S A I+ Sbjct: 303 AVILVSVLLFIAISARMISISALISAVPDMKDRGAFMSVNASTQQFAGGIASALAGLIVV 362 Query: 379 ENPDGSLLHFDRLGYIVVATTIISMIAMYFVQR---------PIARRAGRRIV 422 +N G L + LGY+VV ++++ MY + + P A AG+ V Sbjct: 363 QNQSGKLERYGLLGYVVVCAMLVTLGLMYSIHKMVQAKAKAMPTAEAAGKEAV 415