BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0085.0001.p         (212 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004332836.1| phytoene desaturase [Pseudonocardia dioxaniv...    35   9.2  

>ref|YP_004332836.1| phytoene desaturase [Pseudonocardia dioxanivorans CB1190]
 gb|AEA24983.1| phytoene desaturase [Pseudonocardia dioxanivorans CB1190]
          Length = 532

 Score = 34.7 bits (78), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 28/52 (53%)

Query: 26  AAIALLPAPEVVITPDAPLVKTLPSPLPKMPVPPPLMLSVPLLVAALLETRP 77
           A  A LP   VV+TPD P+V  L   +P+ PVP     S  +L A L  TRP
Sbjct: 283 ADAARLPCDAVVLTPDLPVVHALVGRVPRRPVPLRWSPSAVVLHAGLRRTRP 334