BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0084.0043.p (305 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769257.1| metallo-beta-lactamase superfamily protein [Bra... 543 e-152 ref|YP_001204224.1| putative beta-lactamase [Bradyrhizobium sp. ... 530 e-149 ref|YP_001238525.1| putative beta-lactamase [Bradyrhizobium sp. ... 529 e-148 ref|ZP_01044534.1| beta-lactamase-like [Nitrobacter sp. Nb-311A]... 508 e-142 ref|YP_484784.1| Beta-lactamase-like [Rhodopseudomonas palustris... 508 e-142 >ref|NP_769257.1| metallo-beta-lactamase superfamily protein [Bradyrhizobium japonicum USDA 110] dbj|BAC47882.1| metallo-beta-lactamase superfamily protein [Bradyrhizobium japonicum USDA 110] Length = 316 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 261/305 (85%), Positives = 280/305 (91%) Query: 1 MADNDDIPFNRDFPLKPGVVEQVRPGVRRVLCNNPSPFTFTGTVSYIVGEGKVAIIDPGP 60 M+DNDD+PFNR+FPLK GVVE+VRPGVRRVLCNNPSPFTF+GTVSYIVG G VAIIDPGP Sbjct: 10 MSDNDDVPFNRNFPLKAGVVEEVRPGVRRVLCNNPSPFTFSGTVSYIVGTGNVAIIDPGP 69 Query: 61 DDEAHAKALLDAVKGETVTHILVTHTHRDHSPNTPRIKAATGAPVYAEGPHRASRPRFES 120 DD AHA ALLDAV+GETV+HI VTHTHRDHSPNT RIK ATGAPVYAEGPHRASRPRFES Sbjct: 70 DDAAHATALLDAVRGETVSHIFVTHTHRDHSPNTARIKQATGAPVYAEGPHRASRPRFES 129 Query: 121 EKHNPESGADRDFRPDVQLKHGDVIEGAGFALEALATPGHTANHLAFAWAERSINFVGDH 180 EKHNPESG DRDF PD+++ HGDV+EGAG+ LEA+ATPGHTANHLAFAW ER NFVGDH Sbjct: 130 EKHNPESGVDRDFAPDIRIAHGDVVEGAGWRLEAVATPGHTANHLAFAWPERKFNFVGDH 189 Query: 181 VMGWSTSIVAPPDGSMIDYMASLERLEQRPEQLYFSGHGPEIPEGPRYVRFLARHRRARE 240 VMGWSTSIVAPPDGSMIDYM SL+ L R E LYFSGHGPEIP+GPR+VRFL RHR+ARE Sbjct: 190 VMGWSTSIVAPPDGSMIDYMESLDCLAAREEDLYFSGHGPEIPDGPRFVRFLIRHRKARE 249 Query: 241 ASILHRLGKGEADIPTMVRAIYIGLDPRLANAAGYSVLAHLEDLVARGVVATDGDPVIGG 300 ASILHRL KGEADIPTMVRAIYIG+DPRL AAGYSVLAHLEDLVARGVVATDGDPVIGG Sbjct: 250 ASILHRLAKGEADIPTMVRAIYIGIDPRLTTAAGYSVLAHLEDLVARGVVATDGDPVIGG 309 Query: 301 TYRIA 305 TYR+A Sbjct: 310 TYRMA 314 >ref|YP_001204224.1| putative beta-lactamase [Bradyrhizobium sp. ORS 278] emb|CAL75987.1| putative Beta-lactamase [Bradyrhizobium sp. ORS 278] Length = 304 Score = 530 bits (1366), Expect = e-149, Method: Compositional matrix adjust. Identities = 254/301 (84%), Positives = 277/301 (92%) Query: 5 DDIPFNRDFPLKPGVVEQVRPGVRRVLCNNPSPFTFTGTVSYIVGEGKVAIIDPGPDDEA 64 DD+PFNR+FPL GVV++VRPG+RRVLCNNPSPFTFTGTVSYIVG G VAIIDPGPD+EA Sbjct: 4 DDVPFNRNFPLAAGVVDEVRPGIRRVLCNNPSPFTFTGTVSYIVGRGNVAIIDPGPDNEA 63 Query: 65 HAKALLDAVKGETVTHILVTHTHRDHSPNTPRIKAATGAPVYAEGPHRASRPRFESEKHN 124 HA+ALLDAV+GETV+HI+VTHTHRDHSPNT R+KAATGA VYAEGPHRASRPR+ESEKH+ Sbjct: 64 HAQALLDAVRGETVSHIIVTHTHRDHSPNTGRLKAATGATVYAEGPHRASRPRYESEKHS 123 Query: 125 PESGADRDFRPDVQLKHGDVIEGAGFALEALATPGHTANHLAFAWAERSINFVGDHVMGW 184 PESG DRDF PDV + GDVIEG + LEA+ATPGHTANHLAFAW+ERS FVGDHVMGW Sbjct: 124 PESGVDRDFAPDVTVADGDVIEGQDWQLEAVATPGHTANHLAFAWSERSTTFVGDHVMGW 183 Query: 185 STSIVAPPDGSMIDYMASLERLEQRPEQLYFSGHGPEIPEGPRYVRFLARHRRAREASIL 244 STSIVAPPDGSM+DYMASLERL RPE LYFSGHGPEIPEGPRY RFL RHR+AREASIL Sbjct: 184 STSIVAPPDGSMVDYMASLERLAGRPEDLYFSGHGPEIPEGPRYTRFLMRHRQAREASIL 243 Query: 245 HRLGKGEADIPTMVRAIYIGLDPRLANAAGYSVLAHLEDLVARGVVATDGDPVIGGTYRI 304 HRL KGEADIPTMVRAIYIG+DPRL AAGYSVLAHLEDLVARG+VAT+GDPVIGGTYR+ Sbjct: 244 HRLAKGEADIPTMVRAIYIGIDPRLTTAAGYSVLAHLEDLVARGIVATEGDPVIGGTYRL 303 Query: 305 A 305 A Sbjct: 304 A 304 >ref|YP_001238525.1| putative beta-lactamase [Bradyrhizobium sp. BTAi1] gb|ABQ34619.1| putative Beta-lactamase [Bradyrhizobium sp. BTAi1] Length = 304 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 255/300 (85%), Positives = 276/300 (92%) Query: 5 DDIPFNRDFPLKPGVVEQVRPGVRRVLCNNPSPFTFTGTVSYIVGEGKVAIIDPGPDDEA 64 +D+PFNR+FPL GVV++VRPG+RRVLCNNPSPFTFTGTVSYIVG G VAIIDPGPD+EA Sbjct: 4 EDVPFNRNFPLSAGVVDEVRPGIRRVLCNNPSPFTFTGTVSYIVGTGNVAIIDPGPDNEA 63 Query: 65 HAKALLDAVKGETVTHILVTHTHRDHSPNTPRIKAATGAPVYAEGPHRASRPRFESEKHN 124 HA+ALLDAV+GETVTHILVTHTHRDHSPNT R+KAATGA VYAEGPHRASRPR+ESEKH+ Sbjct: 64 HAQALLDAVRGETVTHILVTHTHRDHSPNTGRLKAATGATVYAEGPHRASRPRYESEKHS 123 Query: 125 PESGADRDFRPDVQLKHGDVIEGAGFALEALATPGHTANHLAFAWAERSINFVGDHVMGW 184 PESG DRDF PDV + GDVIEG G+ LEA+ATPGHTANHLAFAW RS FVGDHVMGW Sbjct: 124 PESGVDRDFAPDVIVADGDVIEGDGWQLEAVATPGHTANHLAFAWTGRSTIFVGDHVMGW 183 Query: 185 STSIVAPPDGSMIDYMASLERLEQRPEQLYFSGHGPEIPEGPRYVRFLARHRRAREASIL 244 +TSIVAPPDGSM+DYMASLERL RPE+LYFSGHGPEIPEGPRY RFL RHR+AREASIL Sbjct: 184 ATSIVAPPDGSMVDYMASLERLAGRPEELYFSGHGPEIPEGPRYTRFLMRHRQAREASIL 243 Query: 245 HRLGKGEADIPTMVRAIYIGLDPRLANAAGYSVLAHLEDLVARGVVATDGDPVIGGTYRI 304 HRL KGEADIPTMVRAIYIG+DPRL AAGYSVLAHLEDLVARGVVATDGDPVIGGTYR+ Sbjct: 244 HRLAKGEADIPTMVRAIYIGIDPRLTTAAGYSVLAHLEDLVARGVVATDGDPVIGGTYRL 303 >ref|ZP_01044534.1| beta-lactamase-like [Nitrobacter sp. Nb-311A] gb|EAQ37315.1| beta-lactamase-like [Nitrobacter sp. Nb-311A] Length = 305 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 247/304 (81%), Positives = 270/304 (88%) Query: 1 MADNDDIPFNRDFPLKPGVVEQVRPGVRRVLCNNPSPFTFTGTVSYIVGEGKVAIIDPGP 60 M D +DIPFNRDFPL+PG+ E+V PGVRRVLC+NP PFTFTGTVSYIVG GKVAIIDPGP Sbjct: 1 MPDTEDIPFNRDFPLRPGLAEEVVPGVRRVLCDNPGPFTFTGTVSYIVGRGKVAIIDPGP 60 Query: 61 DDEAHAKALLDAVKGETVTHILVTHTHRDHSPNTPRIKAATGAPVYAEGPHRASRPRFES 120 D EAHA+ALLDAV+GETVTHI VTHTH+DHS N RIKAATGA VYAEGPHRASRPRFES Sbjct: 61 DSEAHARALLDAVRGETVTHIFVTHTHKDHSSNAARIKAATGAQVYAEGPHRASRPRFES 120 Query: 121 EKHNPESGADRDFRPDVQLKHGDVIEGAGFALEALATPGHTANHLAFAWAERSINFVGDH 180 EKHNPE GADRDF PDV+L +GD + G +ALEA++TPGHTANH+AFAW ER I F GDH Sbjct: 121 EKHNPEFGADRDFVPDVRLHNGDAVMGDEWALEAVSTPGHTANHMAFAWRERGILFAGDH 180 Query: 181 VMGWSTSIVAPPDGSMIDYMASLERLEQRPEQLYFSGHGPEIPEGPRYVRFLARHRRARE 240 VMGWSTSIVAPPDGSM+DYMASLE+L QR EQLYFSGHGPEI + PR+VRFLARHRRARE Sbjct: 181 VMGWSTSIVAPPDGSMVDYMASLEKLSQRDEQLYFSGHGPEIRDAPRFVRFLARHRRARE 240 Query: 241 ASILHRLGKGEADIPTMVRAIYIGLDPRLANAAGYSVLAHLEDLVARGVVATDGDPVIGG 300 ASILHRL KGEADIPT+VRAIYIGLD RL AAGYSVLAHLE+LVARG+V TDGDPVI G Sbjct: 241 ASILHRLAKGEADIPTLVRAIYIGLDARLTGAAGYSVLAHLENLVARGLVHTDGDPVIEG 300 Query: 301 TYRI 304 YR+ Sbjct: 301 RYRL 304 >ref|YP_484784.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] gb|ABD05873.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] Length = 310 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 244/304 (80%), Positives = 269/304 (88%) Query: 2 ADNDDIPFNRDFPLKPGVVEQVRPGVRRVLCNNPSPFTFTGTVSYIVGEGKVAIIDPGPD 61 A +DD+PFNRDFPL+ GVVE+VRPG+RRVLCNNPSPFTFTGTVSYI+G GKVAI+DPGPD Sbjct: 6 AASDDVPFNRDFPLQAGVVEEVRPGLRRVLCNNPSPFTFTGTVSYIIGTGKVAIVDPGPD 65 Query: 62 DEAHAKALLDAVKGETVTHILVTHTHRDHSPNTPRIKAATGAPVYAEGPHRASRPRFESE 121 EAHA+AL+DAVKGETVTHILVTHTH+DHSP TPR+KA TGA VYAEGPHRASRP FESE Sbjct: 66 SEAHAQALIDAVKGETVTHILVTHTHKDHSPGTPRLKALTGATVYAEGPHRASRPYFESE 125 Query: 122 KHNPESGADRDFRPDVQLKHGDVIEGAGFALEALATPGHTANHLAFAWAERSINFVGDHV 181 + ESGADR FRPDV ++ GDVIEG G+A+EA+ATPGHTANH+AFAW ER FVGDH+ Sbjct: 126 TVSTESGADRAFRPDVTIRDGDVIEGDGWAVEAVATPGHTANHMAFAWKERDAIFVGDHI 185 Query: 182 MGWSTSIVAPPDGSMIDYMASLERLEQRPEQLYFSGHGPEIPEGPRYVRFLARHRRAREA 241 MGWSTSIVAPPDGSM+DYM SL+RL R EQLY SGHG EI EGPRY RFL RHR+AREA Sbjct: 186 MGWSTSIVAPPDGSMVDYMESLDRLMARDEQLYLSGHGAEILEGPRYSRFLKRHRQAREA 245 Query: 242 SILHRLGKGEADIPTMVRAIYIGLDPRLANAAGYSVLAHLEDLVARGVVATDGDPVIGGT 301 SILHRL KGE DIPTMVRAIYIG+DPRL AAGYSVLAHLEDLV RGVV TDGDP+IGG Sbjct: 246 SILHRLAKGETDIPTMVRAIYIGIDPRLIGAAGYSVLAHLEDLVIRGVVTTDGDPLIGGR 305 Query: 302 YRIA 305 YR+A Sbjct: 306 YRLA 309