BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0084.0042.p (404 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001238524.1| glutaryl-CoA dehydrogenase [Bradyrhizobium s... 805 0.0 ref|YP_001204223.1| glutaryl-CoA dehydrogenase [Bradyrhizobium s... 801 0.0 ref|NP_946445.1| glutaryl-CoA dehydrogenase [Rhodopseudomonas pa... 800 0.0 ref|YP_004107619.1| acyl-CoA dehydrogenase domain-containing pro... 795 0.0 ref|NP_769256.1| glutaryl-CoA dehydrogenase [Bradyrhizobium japo... 792 0.0 >ref|YP_001238524.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ34618.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 404 Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/403 (94%), Positives = 394/403 (97%) Query: 1 MSVRPQAKDKPADASFQWDDPFLLDDQLTEDERLIRDTARAYAQDKLLPRVTKAYLEEKT 60 MS RPQAKDKPA +SFQWDDPFLLDDQLTEDER++RDTARAYAQDKLLPRVTKAYLEEKT Sbjct: 1 MSARPQAKDKPAQSSFQWDDPFLLDDQLTEDERMVRDTARAYAQDKLLPRVTKAYLEEKT 60 Query: 61 DREIFNEMGELGLIGVTLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP 120 DREIFNEMGELGLIG+TLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP Sbjct: 61 DREIFNEMGELGLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP 120 Query: 121 IYAYGDENQRKKYLPKLATGEWVGCFGLTEPDAGSDPGGMKTRAEKVADGYRLNGAKMWI 180 IYAYGDENQRKKYLPKLA+GEWVGCFGLTEPDAGSDP GMKTRAEKVADGYRL G+KMWI Sbjct: 121 IYAYGDENQRKKYLPKLASGEWVGCFGLTEPDAGSDPAGMKTRAEKVADGYRLTGSKMWI 180 Query: 181 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKVGGKLSLRASITGEIVLDNVVV 240 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPK+GGKLSLRASITGE+V+D VVV Sbjct: 181 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKIGGKLSLRASITGEVVMDGVVV 240 Query: 241 PESALLPNVSGLKGPFGCLNRARYGISWGALGAAEDCMHRARQYTLDRKQFNRPLAATQL 300 PE ALLPNVSGLKGPFGCLNRARYGISWG LGAAEDCMHRARQYTLDRKQF +PLAATQL Sbjct: 241 PEEALLPNVSGLKGPFGCLNRARYGISWGVLGAAEDCMHRARQYTLDRKQFGKPLAATQL 300 Query: 301 VQKKLADMETEIALGLQASLRVGRLMDEGKMAPEMISIVKRNNCGKSLDIARMARDMHGG 360 VQKKLADMETEIALGLQASLRVGRLMDEGKMAPEMISIVKRNNCGK+LDIAR+ARDMHGG Sbjct: 301 VQKKLADMETEIALGLQASLRVGRLMDEGKMAPEMISIVKRNNCGKALDIARVARDMHGG 360 Query: 361 NGIQIEYHVMRHAANLETVNTYEGTHDVHALILGRAITGIQAF 403 NGIQIEY VMRHAANLETVNTYEGTHDVHALILGRAITGIQAF Sbjct: 361 NGIQIEYQVMRHAANLETVNTYEGTHDVHALILGRAITGIQAF 403 >ref|YP_001204223.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL75986.1| glutaryl-CoA dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 404 Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/403 (94%), Positives = 393/403 (97%) Query: 1 MSVRPQAKDKPADASFQWDDPFLLDDQLTEDERLIRDTARAYAQDKLLPRVTKAYLEEKT 60 MS RPQAKDKPA +SFQWDDPFLLD+QLTEDER++RDTARAYAQDKLLPRVTKAYLEEKT Sbjct: 1 MSARPQAKDKPAQSSFQWDDPFLLDEQLTEDERMVRDTARAYAQDKLLPRVTKAYLEEKT 60 Query: 61 DREIFNEMGELGLIGVTLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP 120 DREIFNEMGELGLIG+TLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP Sbjct: 61 DREIFNEMGELGLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP 120 Query: 121 IYAYGDENQRKKYLPKLATGEWVGCFGLTEPDAGSDPGGMKTRAEKVADGYRLNGAKMWI 180 IYAYGDENQRKKYLPKLA+GEWVGCFGLTEPDAGSDP GMKTRAEKVADGYRL G+KMWI Sbjct: 121 IYAYGDENQRKKYLPKLASGEWVGCFGLTEPDAGSDPAGMKTRAEKVADGYRLTGSKMWI 180 Query: 181 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKVGGKLSLRASITGEIVLDNVVV 240 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPK+GGKLSLRASITGEIV+D VVV Sbjct: 181 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKIGGKLSLRASITGEIVMDGVVV 240 Query: 241 PESALLPNVSGLKGPFGCLNRARYGISWGALGAAEDCMHRARQYTLDRKQFNRPLAATQL 300 PE ALLPNVSGLKGPFGCLNRARYGISWG LGAAEDCMHRARQYTLDRKQF RPLAATQL Sbjct: 241 PEDALLPNVSGLKGPFGCLNRARYGISWGVLGAAEDCMHRARQYTLDRKQFGRPLAATQL 300 Query: 301 VQKKLADMETEIALGLQASLRVGRLMDEGKMAPEMISIVKRNNCGKSLDIARMARDMHGG 360 VQKKLADMETEIALGLQASLRVGRLMDEGKMAPEMISIVKRNNCGK+LDIAR++RDMHGG Sbjct: 301 VQKKLADMETEIALGLQASLRVGRLMDEGKMAPEMISIVKRNNCGKALDIARVSRDMHGG 360 Query: 361 NGIQIEYHVMRHAANLETVNTYEGTHDVHALILGRAITGIQAF 403 NGIQIEY VMRH +NLETVNTYEGTHDVHALILGRAITGIQAF Sbjct: 361 NGIQIEYQVMRHVSNLETVNTYEGTHDVHALILGRAITGIQAF 403 >ref|NP_946445.1| glutaryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] ref|YP_001990299.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris TIE-1] emb|CAE26537.1| glutaryl-CoA dehydrogenase [Rhodopseudomonas palustris CGA009] gb|ACE99823.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris TIE-1] Length = 404 Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust. Identities = 380/404 (94%), Positives = 392/404 (97%) Query: 1 MSVRPQAKDKPADASFQWDDPFLLDDQLTEDERLIRDTARAYAQDKLLPRVTKAYLEEKT 60 MSVR Q KDKPA ASF+WDDP LL+DQLTEDER+IRDTARAYAQDKLLPR+ +AYLEEKT Sbjct: 1 MSVRAQTKDKPAQASFKWDDPLLLEDQLTEDERMIRDTARAYAQDKLLPRINQAYLEEKT 60 Query: 61 DREIFNEMGELGLIGVTLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP 120 DREIFNEMG LGLIGVTLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP Sbjct: 61 DREIFNEMGSLGLIGVTLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP 120 Query: 121 IYAYGDENQRKKYLPKLATGEWVGCFGLTEPDAGSDPGGMKTRAEKVADGYRLNGAKMWI 180 IYAYGDENQRKKYLPKLA+GEWVGCFGLTEPDAGSDPGGMKT+AEKVADGYRL G+KMWI Sbjct: 121 IYAYGDENQRKKYLPKLASGEWVGCFGLTEPDAGSDPGGMKTKAEKVADGYRLTGSKMWI 180 Query: 181 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKVGGKLSLRASITGEIVLDNVVV 240 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKVGGKLSLRASITGEIV+D VVV Sbjct: 181 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKVGGKLSLRASITGEIVMDGVVV 240 Query: 241 PESALLPNVSGLKGPFGCLNRARYGISWGALGAAEDCMHRARQYTLDRKQFNRPLAATQL 300 PE ALLPNVSGLKGPFGCLNRARYGISWGA+GAAEDC HRARQYTLDRKQFNRPLAATQL Sbjct: 241 PEDALLPNVSGLKGPFGCLNRARYGISWGAMGAAEDCFHRARQYTLDRKQFNRPLAATQL 300 Query: 301 VQKKLADMETEIALGLQASLRVGRLMDEGKMAPEMISIVKRNNCGKSLDIARMARDMHGG 360 VQKKLADMETEI LGLQASLRVGRLMDEGKMAPEMISIVKRNNCGK+LDIARMARDMHGG Sbjct: 301 VQKKLADMETEITLGLQASLRVGRLMDEGKMAPEMISIVKRNNCGKALDIARMARDMHGG 360 Query: 361 NGIQIEYHVMRHAANLETVNTYEGTHDVHALILGRAITGIQAFS 404 NGIQIEYHVMRHA NLETVNTYEGTHDVHALILGRAITG+QAFS Sbjct: 361 NGIQIEYHVMRHAQNLETVNTYEGTHDVHALILGRAITGLQAFS 404 >ref|YP_004107619.1| acyl-CoA dehydrogenase domain-containing protein [Rhodopseudomonas palustris DX-1] gb|ADU42886.1| acyl-CoA dehydrogenase domain protein [Rhodopseudomonas palustris DX-1] Length = 404 Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/404 (93%), Positives = 392/404 (97%) Query: 1 MSVRPQAKDKPADASFQWDDPFLLDDQLTEDERLIRDTARAYAQDKLLPRVTKAYLEEKT 60 MSVR Q KDKPA ASF+WDDP LL+DQLTEDER+IRDTARAYAQDKLLPRV++AYLEEKT Sbjct: 1 MSVRAQTKDKPAPASFKWDDPLLLEDQLTEDERMIRDTARAYAQDKLLPRVSQAYLEEKT 60 Query: 61 DREIFNEMGELGLIGVTLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP 120 DREIFNEMG LGLIG+TLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP Sbjct: 61 DREIFNEMGSLGLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP 120 Query: 121 IYAYGDENQRKKYLPKLATGEWVGCFGLTEPDAGSDPGGMKTRAEKVADGYRLNGAKMWI 180 IYAYGDENQRKKYLPKLA+GEWVGCFGLTEPDAGSDPGGMKT+AEKVADGYRL G+KMWI Sbjct: 121 IYAYGDENQRKKYLPKLASGEWVGCFGLTEPDAGSDPGGMKTKAEKVADGYRLTGSKMWI 180 Query: 181 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKVGGKLSLRASITGEIVLDNVVV 240 SNAPIADVFVVWAKSAAHDNQIRGF+LEKGMKGLSAPKVGGKLSLRASITGEIV+D VVV Sbjct: 181 SNAPIADVFVVWAKSAAHDNQIRGFVLEKGMKGLSAPKVGGKLSLRASITGEIVMDGVVV 240 Query: 241 PESALLPNVSGLKGPFGCLNRARYGISWGALGAAEDCMHRARQYTLDRKQFNRPLAATQL 300 PE LLPNVSGLKGPFGCLNRARYGISWGA+GAAEDC HRARQYTLDRKQFNRPLAATQL Sbjct: 241 PEENLLPNVSGLKGPFGCLNRARYGISWGAMGAAEDCFHRARQYTLDRKQFNRPLAATQL 300 Query: 301 VQKKLADMETEIALGLQASLRVGRLMDEGKMAPEMISIVKRNNCGKSLDIARMARDMHGG 360 VQKKLADMETEI LGLQASLRVGRLMDEGKMAPEMISIVKRNNCGK+LDIARMARDMHGG Sbjct: 301 VQKKLADMETEITLGLQASLRVGRLMDEGKMAPEMISIVKRNNCGKALDIARMARDMHGG 360 Query: 361 NGIQIEYHVMRHAANLETVNTYEGTHDVHALILGRAITGIQAFS 404 NGIQIEYHVMRHA NLETVNTYEGTHDVHALILGRAITG+QAF+ Sbjct: 361 NGIQIEYHVMRHAQNLETVNTYEGTHDVHALILGRAITGLQAFA 404 >ref|NP_769256.1| glutaryl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC47881.1| glutaryl-CoA dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 404 Score = 792 bits (2045), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/403 (92%), Positives = 390/403 (96%) Query: 1 MSVRPQAKDKPADASFQWDDPFLLDDQLTEDERLIRDTARAYAQDKLLPRVTKAYLEEKT 60 MSVRPQ KDKPA ASFQWDDPFLLD+QLTEDER++RDTARAYAQDKLLPR+TKAYLEE T Sbjct: 1 MSVRPQTKDKPAAASFQWDDPFLLDEQLTEDERMVRDTARAYAQDKLLPRITKAYLEETT 60 Query: 61 DREIFNEMGELGLIGVTLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP 120 DREIFNEMGELGLIG+TLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP Sbjct: 61 DREIFNEMGELGLIGITLPEEYGCANASYVAYGLVAREIERVDSGYRSMNSVQSSLVMYP 120 Query: 121 IYAYGDENQRKKYLPKLATGEWVGCFGLTEPDAGSDPGGMKTRAEKVADGYRLNGAKMWI 180 IYAYGDENQRKKYLPKLA+GEWVGCFGLTEPDAGSDP GMKTRAEKV+DGYRL G+KMWI Sbjct: 121 IYAYGDENQRKKYLPKLASGEWVGCFGLTEPDAGSDPAGMKTRAEKVSDGYRLTGSKMWI 180 Query: 181 SNAPIADVFVVWAKSAAHDNQIRGFILEKGMKGLSAPKVGGKLSLRASITGEIVLDNVVV 240 SNAPIADVFVVWAKSAAHDNQIRGF+LEKGMKGLSAPK+GGKLSLRASITGE+V+D VVV Sbjct: 181 SNAPIADVFVVWAKSAAHDNQIRGFVLEKGMKGLSAPKIGGKLSLRASITGEVVMDGVVV 240 Query: 241 PESALLPNVSGLKGPFGCLNRARYGISWGALGAAEDCMHRARQYTLDRKQFNRPLAATQL 300 PE ALLPNVSGLKGPFGCLNRARYGISWGALGAAEDCMHRARQYTLDRKQF +PLAATQL Sbjct: 241 PEDALLPNVSGLKGPFGCLNRARYGISWGALGAAEDCMHRARQYTLDRKQFGKPLAATQL 300 Query: 301 VQKKLADMETEIALGLQASLRVGRLMDEGKMAPEMISIVKRNNCGKSLDIARMARDMHGG 360 VQKKLADMETEIALGLQ SLRVGRLMDEGK APEMISI+KRNNCGK+LDIAR+ARDMHGG Sbjct: 301 VQKKLADMETEIALGLQGSLRVGRLMDEGKFAPEMISIMKRNNCGKALDIARVARDMHGG 360 Query: 361 NGIQIEYHVMRHAANLETVNTYEGTHDVHALILGRAITGIQAF 403 NGI IEYHVMRH NLETVNTYEGTHDVHALILGRAITGIQAF Sbjct: 361 NGISIEYHVMRHVHNLETVNTYEGTHDVHALILGRAITGIQAF 403