BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0084.0041.p (358 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769255.1| 3,4-dihydroxy-2-butanone-4-phoshate synthase/GT... 652 0.0 ref|YP_001204222.1| putative GTP cyclohydrolase II, riboflavin b... 644 0.0 ref|YP_001238523.1| GTP cyclohydrolase II / 3,4-dihydroxy-2-buta... 642 0.0 ref|YP_317226.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase [... 633 e-179 ref|ZP_01044536.1| 3,4-Dihydroxy-2-butanone 4-phosphate synthase... 630 e-179 >ref|NP_769255.1| 3,4-dihydroxy-2-butanone-4-phoshate synthase/GTP cyclohydrolase II [Bradyrhizobium japonicum USDA 110] dbj|BAC47880.1| 3,4-dihydroxy-2-butanone-4-phoshate synthase/GTP cyclohydrolase II [Bradyrhizobium japonicum USDA 110] Length = 358 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/357 (86%), Positives = 335/357 (93%) Query: 1 MADTIQEVLQAFAKGELVVVTDDDDREGEGDLIVAASFCTAEKMAFIIRHTSGIVCAPIT 60 M DT+QEVLQAFA+GELVVVTDD+DREGEGDLIVAAS CTAEKMAFIIRHTSGIVCAP+T Sbjct: 1 MPDTVQEVLQAFARGELVVVTDDEDREGEGDLIVAASLCTAEKMAFIIRHTSGIVCAPVT 60 Query: 61 TEDARRLRLDPMVAHNESNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPNAGATDF 120 TEDARRLRLDPMVAHN+S HTTAFTVSIDYKPDGGTGISAEERASCCRAL+NPN GA DF Sbjct: 61 TEDARRLRLDPMVAHNDSAHTTAFTVSIDYKPDGGTGISAEERASCCRALSNPNVGANDF 120 Query: 121 ARPGHIFPLIARDGGVLLRSGHTEAAVDLCRLSGLPPVGVISELMNDDGTVMKGEQVAKF 180 ARPGHIFPLIA+DGGVLLRSGHTEAAVDLC+LSGLPPVGVISELMNDDG+VMKGEQVA+F Sbjct: 121 ARPGHIFPLIAKDGGVLLRSGHTEAAVDLCKLSGLPPVGVISELMNDDGSVMKGEQVARF 180 Query: 181 AAAHKLKHVTIADMIAYRQAREKLIERVATFTTESPIGPLQGYAYRSPFDEIMHAAFVYN 240 AA HKLKHVTIADMIAYRQ REKLIERV+TF T+SPIGPLQGYAYRSPFD I H AFVYN Sbjct: 181 AAQHKLKHVTIADMIAYRQVREKLIERVSTFVTDSPIGPLQGYAYRSPFDSIAHVAFVYN 240 Query: 241 GIGDGRDVLTRLHKPNIVKDLFTGPARMEAVLRHFKDAGRGVLVYLRDGAAGVPVEPVGE 300 G+GDG++VLTR HKPNIVKD+FTG RM AVL HF+ +GRGVLVYLRDGAAGVPV P+ + Sbjct: 241 GVGDGKNVLTRFHKPNIVKDIFTGHKRMAAVLEHFERSGRGVLVYLRDGAAGVPVAPLPD 300 Query: 301 QKTAEADRHRQWREVGVGAQILRDLGVTSIRHLTSSVHDYKGLSGFGIEIVSNEKLE 357 + + EADR+RQWRE+GVGAQILRDLGVTSIRHLTSSVHDYKGLSGFGIEIV+NE LE Sbjct: 301 ETSTEADRNRQWREIGVGAQILRDLGVTSIRHLTSSVHDYKGLSGFGIEIVANELLE 357 >ref|YP_001204222.1| putative GTP cyclohydrolase II, riboflavin biosynthesis [Bradyrhizobium sp. ORS 278] emb|CAL75985.1| putative GTP cyclohydrolase II, riboflavin biosynthesis [Bradyrhizobium sp. ORS 278] Length = 358 Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/357 (89%), Positives = 340/357 (95%) Query: 1 MADTIQEVLQAFAKGELVVVTDDDDREGEGDLIVAASFCTAEKMAFIIRHTSGIVCAPIT 60 MAD+IQEVL AFAKGE+VVVTDDDDREGEGDLIVAAS CT +KMAFIIRHTSGIVCAPIT Sbjct: 1 MADSIQEVLHAFAKGEMVVVTDDDDREGEGDLIVAASLCTPDKMAFIIRHTSGIVCAPIT 60 Query: 61 TEDARRLRLDPMVAHNESNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPNAGATDF 120 +DARRLRLDPMVAHN+SNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPNAGA DF Sbjct: 61 ADDARRLRLDPMVAHNDSNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPNAGANDF 120 Query: 121 ARPGHIFPLIARDGGVLLRSGHTEAAVDLCRLSGLPPVGVISELMNDDGTVMKGEQVAKF 180 ARPGHIFPLIARDGGVLLRSGHTEAAVDLC+LSGLPPVGVISELMNDDGTVMKGEQV +F Sbjct: 121 ARPGHIFPLIARDGGVLLRSGHTEAAVDLCKLSGLPPVGVISELMNDDGTVMKGEQVVRF 180 Query: 181 AAAHKLKHVTIADMIAYRQAREKLIERVATFTTESPIGPLQGYAYRSPFDEIMHAAFVYN 240 AAAH LKHVTIAD+I+YRQAREKLIERV+TFTTESPIGPLQGYAYRSPFD I HAAFVYN Sbjct: 181 AAAHNLKHVTIADLISYRQAREKLIERVSTFTTESPIGPLQGYAYRSPFDPITHAAFVYN 240 Query: 241 GIGDGRDVLTRLHKPNIVKDLFTGPARMEAVLRHFKDAGRGVLVYLRDGAAGVPVEPVGE 300 GIGDG++VLTRLHKPNIVKDL GP R++AVL+HFK GRGVL+YLRDGAAGVPVEPV E Sbjct: 241 GIGDGKNVLTRLHKPNIVKDLIAGPQRIQAVLQHFKKNGRGVLIYLRDGAAGVPVEPVAE 300 Query: 301 QKTAEADRHRQWREVGVGAQILRDLGVTSIRHLTSSVHDYKGLSGFGIEIVSNEKLE 357 TAEADRHRQWREVGVGAQILRDLGVTSIR+LTSSVHDYKGLSGFGIEIV+NE+LE Sbjct: 301 PHTAEADRHRQWREVGVGAQILRDLGVTSIRNLTSSVHDYKGLSGFGIEIVANERLE 357 >ref|YP_001238523.1| GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase [Bradyrhizobium sp. BTAi1] gb|ABQ34617.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase [Bradyrhizobium sp. BTAi1] Length = 358 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/357 (89%), Positives = 340/357 (95%) Query: 1 MADTIQEVLQAFAKGELVVVTDDDDREGEGDLIVAASFCTAEKMAFIIRHTSGIVCAPIT 60 MAD+IQEVL AFAKGE+VVVTDDDDREGEGDLIVAAS CT +KMAFIIRHTSGIVCAPIT Sbjct: 1 MADSIQEVLYAFAKGEMVVVTDDDDREGEGDLIVAASLCTPDKMAFIIRHTSGIVCAPIT 60 Query: 61 TEDARRLRLDPMVAHNESNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPNAGATDF 120 +DARRLRLDPMVAHN+SNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPNAGA DF Sbjct: 61 ADDARRLRLDPMVAHNDSNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPNAGANDF 120 Query: 121 ARPGHIFPLIARDGGVLLRSGHTEAAVDLCRLSGLPPVGVISELMNDDGTVMKGEQVAKF 180 ARPGHIFPLIARDGGVLLRSGHTEAAVDLC+LSGLPPVGVISELMNDDGTVMKGEQV +F Sbjct: 121 ARPGHIFPLIARDGGVLLRSGHTEAAVDLCKLSGLPPVGVISELMNDDGTVMKGEQVVRF 180 Query: 181 AAAHKLKHVTIADMIAYRQAREKLIERVATFTTESPIGPLQGYAYRSPFDEIMHAAFVYN 240 AAAH LKHVTIAD+I+YRQAREKLIERV+TFTTESPIGPLQG+AYRSPFD I HAAFVYN Sbjct: 181 AAAHNLKHVTIADLISYRQAREKLIERVSTFTTESPIGPLQGFAYRSPFDPITHAAFVYN 240 Query: 241 GIGDGRDVLTRLHKPNIVKDLFTGPARMEAVLRHFKDAGRGVLVYLRDGAAGVPVEPVGE 300 GIGDG++VLTRLHKPNIVKDL GP R++AVL+HFK AGRG+L+YLRDGAAGVPVEPV E Sbjct: 241 GIGDGKNVLTRLHKPNIVKDLIAGPQRIQAVLQHFKKAGRGILIYLRDGAAGVPVEPVTE 300 Query: 301 QKTAEADRHRQWREVGVGAQILRDLGVTSIRHLTSSVHDYKGLSGFGIEIVSNEKLE 357 TAEADRHRQWREVGVGAQILRDLGVTSIR+LTSS HDYKGLSGFGIEIV+NE+LE Sbjct: 301 PHTAEADRHRQWREVGVGAQILRDLGVTSIRNLTSSAHDYKGLSGFGIEIVANERLE 357 >ref|YP_317226.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase [Nitrobacter winogradskyi Nb-255] gb|ABA03874.1| 3,4-dihydroxy-2-butanone 4-phosphate synthase [Nitrobacter winogradskyi Nb-255] Length = 358 Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust. Identities = 304/358 (84%), Positives = 329/358 (91%) Query: 1 MADTIQEVLQAFAKGELVVVTDDDDREGEGDLIVAASFCTAEKMAFIIRHTSGIVCAPIT 60 M I E+LQAFA GE+VVVTDD+DREGEGDLIVAAS CTAEKMAF+IRHTSGIVCAPIT Sbjct: 1 MPHPIPEILQAFANGEIVVVTDDEDREGEGDLIVAASLCTAEKMAFVIRHTSGIVCAPIT 60 Query: 61 TEDARRLRLDPMVAHNESNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPNAGATDF 120 +DA+RLRLDPMVAHNESNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPN+GA+DF Sbjct: 61 MDDAQRLRLDPMVAHNESNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPNSGASDF 120 Query: 121 ARPGHIFPLIARDGGVLLRSGHTEAAVDLCRLSGLPPVGVISELMNDDGTVMKGEQVAKF 180 ARPGHIFPLIAR+GGVLLR+GHTEAAVDLCRL+ LPPVGVISELMNDDGTVMKGEQVA+F Sbjct: 121 ARPGHIFPLIARNGGVLLRAGHTEAAVDLCRLASLPPVGVISELMNDDGTVMKGEQVARF 180 Query: 181 AAAHKLKHVTIADMIAYRQAREKLIERVATFTTESPIGPLQGYAYRSPFDEIMHAAFVYN 240 A AH L+HVTIAD+IAYRQAREKLIERV+ F +SPIGPLQGYAYRSPFD I H AFVYN Sbjct: 181 ADAHGLRHVTIADIIAYRQAREKLIERVSEFAIDSPIGPLQGYAYRSPFDSIAHVAFVYN 240 Query: 241 GIGDGRDVLTRLHKPNIVKDLFTGPARMEAVLRHFKDAGRGVLVYLRDGAAGVPVEPVGE 300 GIGDGR+VLTR HK NIV+D+F GP RME VL HF+ GRGVLVYLRDGAAGVPV P+ E Sbjct: 241 GIGDGRNVLTRFHKSNIVRDIFAGPKRMENVLEHFRRDGRGVLVYLRDGAAGVPVAPLPE 300 Query: 301 QKTAEADRHRQWREVGVGAQILRDLGVTSIRHLTSSVHDYKGLSGFGIEIVSNEKLET 358 + +AEADR+RQWREVGVGAQILRDLGVTSIRHLTSS +DYKGLSGFGIEIVSNE LET Sbjct: 301 EGSAEADRNRQWREVGVGAQILRDLGVTSIRHLTSSAYDYKGLSGFGIEIVSNEHLET 358 >ref|ZP_01044536.1| 3,4-Dihydroxy-2-butanone 4-phosphate synthase [Nitrobacter sp. Nb-311A] gb|EAQ37317.1| 3,4-Dihydroxy-2-butanone 4-phosphate synthase [Nitrobacter sp. Nb-311A] Length = 358 Score = 630 bits (1626), Expect = e-179, Method: Compositional matrix adjust. Identities = 299/358 (83%), Positives = 331/358 (92%) Query: 1 MADTIQEVLQAFAKGELVVVTDDDDREGEGDLIVAASFCTAEKMAFIIRHTSGIVCAPIT 60 M I EV+QAFA GE+VVVTDD+DREGEGDLIVAAS CTAEKMAF+IRHTSGIVCAPIT Sbjct: 1 MPHPIPEVIQAFANGEIVVVTDDEDREGEGDLIVAASLCTAEKMAFVIRHTSGIVCAPIT 60 Query: 61 TEDARRLRLDPMVAHNESNHTTAFTVSIDYKPDGGTGISAEERASCCRALANPNAGATDF 120 TE+A+RLRLDPMVAHNESNHTTAFTVS+DYKPDGGTGISAE+RASCCRALANPN+GA+DF Sbjct: 61 TENAQRLRLDPMVAHNESNHTTAFTVSVDYKPDGGTGISAEQRASCCRALANPNSGASDF 120 Query: 121 ARPGHIFPLIARDGGVLLRSGHTEAAVDLCRLSGLPPVGVISELMNDDGTVMKGEQVAKF 180 ARPGHIFPLIAR+GGVLLR+GHTEAA+DLC+L+GLPPVGVISELMNDDGTVMKGE+VA F Sbjct: 121 ARPGHIFPLIARNGGVLLRAGHTEAAIDLCKLAGLPPVGVISELMNDDGTVMKGERVAGF 180 Query: 181 AAAHKLKHVTIADMIAYRQAREKLIERVATFTTESPIGPLQGYAYRSPFDEIMHAAFVYN 240 A AH LKHVTIAD+IAYRQAREKLIERV+ F +SPIGPLQGYAYRSPFD I H AFVYN Sbjct: 181 ADAHSLKHVTIADIIAYRQAREKLIERVSEFAIDSPIGPLQGYAYRSPFDSIAHVAFVYN 240 Query: 241 GIGDGRDVLTRLHKPNIVKDLFTGPARMEAVLRHFKDAGRGVLVYLRDGAAGVPVEPVGE 300 GIGDG+++LTR HK NIV+D+F GP RME VL HF+ AGRGVLVYLRDGAAGVPV P+ E Sbjct: 241 GIGDGKNILTRFHKSNIVRDIFAGPKRMERVLEHFRTAGRGVLVYLRDGAAGVPVAPLPE 300 Query: 301 QKTAEADRHRQWREVGVGAQILRDLGVTSIRHLTSSVHDYKGLSGFGIEIVSNEKLET 358 +AEADR+RQWREVGVGAQILRDLGVTSIRHLTSS +DYKGLSGFGIEIVSNE+L++ Sbjct: 301 DGSAEADRNRQWREVGVGAQILRDLGVTSIRHLTSSAYDYKGLSGFGIEIVSNERLDS 358