BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0084.0039.p (180 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_782699.1| hypothetical protein RPE_3790 [Rhodopseudomonas... 252 1e-65 ref|YP_532096.1| hypothetical protein RPC_2223 [Rhodopseudomonas... 252 2e-65 ref|NP_769253.1| hypothetical protein bll2613 [Bradyrhizobium ja... 239 1e-61 ref|YP_569032.1| hypothetical protein RPD_1896 [Rhodopseudomonas... 239 1e-61 ref|YP_001990996.1| hypothetical protein Rpal_1998 [Rhodopseudom... 237 7e-61 >ref|YP_782699.1| hypothetical protein RPE_3790 [Rhodopseudomonas palustris BisA53] gb|ABJ07719.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 180 Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 122/158 (77%), Positives = 138/158 (87%) Query: 23 SEALAQSSASIEQNFANSLTVVPSEGLTASGAFYVPVYSSVSMSQGKLRADFSVTLSVHN 82 S A AQ++ IEQ+FA SLT +P+ +ASG+FYVP YSSVSMSQG+LRADFSVTLSVHN Sbjct: 23 SRAQAQTATPIEQSFAASLTALPAAPWSASGSFYVPAYSSVSMSQGRLRADFSVTLSVHN 82 Query: 83 ASETKPLVLKRIAYFDTSGKMVESYLKSPVALKPFATVEVAIATTDTRGGTGANFVVDWA 142 ASETKPLVL RIAYFDT+GKMVESYLK+PVALKPF+TVEV I +DTRGGTGANFVVDWA Sbjct: 83 ASETKPLVLNRIAYFDTAGKMVESYLKAPVALKPFSTVEVFIPASDTRGGTGANFVVDWA 142 Query: 143 AAGDIAEPAVEALMVGSVGAGHYAFISQGRPIRLVGKN 180 A+G+IAEP VEALM+GS+ GHYAFISQGR R VGKN Sbjct: 143 ASGEIAEPVVEALMIGSLANGHYAFISQGRLTRAVGKN 180 >ref|YP_532096.1| hypothetical protein RPC_2223 [Rhodopseudomonas palustris BisB18] gb|ABD87777.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 191 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 117/159 (73%), Positives = 138/159 (86%) Query: 22 MSEALAQSSASIEQNFANSLTVVPSEGLTASGAFYVPVYSSVSMSQGKLRADFSVTLSVH 81 M+ A AQS+ IE++FA SLT +P+E L +GAFYVP YSSVSMS G+LR DFSVTLS+H Sbjct: 33 MAGAAAQSAPPIERSFAGSLTALPAEPLGVAGAFYVPAYSSVSMSHGRLRGDFSVTLSIH 92 Query: 82 NASETKPLVLKRIAYFDTSGKMVESYLKSPVALKPFATVEVAIATTDTRGGTGANFVVDW 141 NASETKPLV++RI YFDT+GK+VESYLK+PVALKPF+T+E +A TD RGGTGANFVVDW Sbjct: 93 NASETKPLVIRRIGYFDTAGKLVESYLKAPVALKPFSTIEAFVANTDVRGGTGANFVVDW 152 Query: 142 AAAGDIAEPAVEALMVGSVGAGHYAFISQGRPIRLVGKN 180 AAAG+IAEP VEALM+GS+ GHYAFI+QGRPIR VGKN Sbjct: 153 AAAGEIAEPVVEALMIGSIANGHYAFITQGRPIRQVGKN 191 >ref|NP_769253.1| hypothetical protein bll2613 [Bradyrhizobium japonicum USDA 110] dbj|BAC47878.1| bll2613 [Bradyrhizobium japonicum USDA 110] Length = 206 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 113/153 (73%), Positives = 126/153 (82%) Query: 28 QSSASIEQNFANSLTVVPSEGLTASGAFYVPVYSSVSMSQGKLRADFSVTLSVHNASETK 87 QS +IEQNFA+SLTV+P E L +G FYVP YSSV+MSQGKLR DFSVTLSVHNASE++ Sbjct: 54 QSKVNIEQNFADSLTVLPKEELAVAGGFYVPAYSSVAMSQGKLRVDFSVTLSVHNASESQ 113 Query: 88 PLVLKRIAYFDTSGKMVESYLKSPVALKPFATVEVAIATTDTRGGTGANFVVDWAAAGDI 147 PLV+KRIAYFDT+GK VESYLK+PVAL+P ATV + I T D RGGTGANF+VDWAA GDI Sbjct: 114 PLVVKRIAYFDTAGKQVESYLKAPVALRPLATVSIFIPTDDVRGGTGANFIVDWAATGDI 173 Query: 148 AEPAVEALMVGSVGAGHYAFISQGRPIRLVGKN 180 AEP VEALMVG V HYAFISQGRP R K Sbjct: 174 AEPVVEALMVGGVANAHYAFISQGRPTRTATKK 206 >ref|YP_569032.1| hypothetical protein RPD_1896 [Rhodopseudomonas palustris BisB5] gb|ABE39131.1| hypothetical protein RPD_1896 [Rhodopseudomonas palustris BisB5] Length = 194 Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 118/183 (64%), Positives = 141/183 (77%), Gaps = 4/183 (2%) Query: 1 MCHIRAGGIFLAVLLCLLTVRMSEALAQSSAS---IEQNFANSLTVVPSEGLTASGAFYV 57 + I GG AV++ L V + AQ + IEQ FA +LT P E L +G+FYV Sbjct: 13 ISRIGVGGRVAAVMVGLFLVSADQGWAQGRGAGPGIEQAFAGALTTAP-EPLNVAGSFYV 71 Query: 58 PVYSSVSMSQGKLRADFSVTLSVHNASETKPLVLKRIAYFDTSGKMVESYLKSPVALKPF 117 P YSSVS+SQGK RADFSVTLS+HNASETKPLV++R+AYFD SGKMVESYLK+PVALKPF Sbjct: 72 PAYSSVSLSQGKARADFSVTLSIHNASETKPLVIRRVAYFDGSGKMVESYLKAPVALKPF 131 Query: 118 ATVEVAIATTDTRGGTGANFVVDWAAAGDIAEPAVEALMVGSVGAGHYAFISQGRPIRLV 177 AT+E + D RGGTGANFVVDWAA+G+IAEP +EALM+GS +GHYAFISQGRPIR+ Sbjct: 132 ATIEAFVPNLDVRGGTGANFVVDWAASGEIAEPVMEALMLGSFASGHYAFISQGRPIRIT 191 Query: 178 GKN 180 GK+ Sbjct: 192 GKD 194 >ref|YP_001990996.1| hypothetical protein Rpal_1998 [Rhodopseudomonas palustris TIE-1] gb|ACF00521.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 194 Score = 237 bits (604), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 117/167 (70%), Positives = 134/167 (80%), Gaps = 2/167 (1%) Query: 14 LLCLLTVRMSEALAQSSA--SIEQNFANSLTVVPSEGLTASGAFYVPVYSSVSMSQGKLR 71 L CL+ + ALAQS A I + FA SLT +PSE LT G+ YVP YSSVS++QG R Sbjct: 26 LTCLILSAGAPALAQSPAPRDIAKAFAGSLTALPSEPLTIGGSIYVPAYSSVSINQGGAR 85 Query: 72 ADFSVTLSVHNASETKPLVLKRIAYFDTSGKMVESYLKSPVALKPFATVEVAIATTDTRG 131 ADFSVTLS+HNASETKPLV+KRIAY+D +GKMVES+LK PVALKPFAT+E +AT DTRG Sbjct: 86 ADFSVTLSIHNASETKPLVIKRIAYYDGAGKMVESHLKEPVALKPFATIEAFVATLDTRG 145 Query: 132 GTGANFVVDWAAAGDIAEPAVEALMVGSVGAGHYAFISQGRPIRLVG 178 GTGANFV+DWAAAGDIAEP EALM+G+ GHYAFISQGRPIR G Sbjct: 146 GTGANFVIDWAAAGDIAEPVTEALMIGTFANGHYAFISQGRPIRSTG 192