BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0084.0014.p (463 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772374.1| ABC transporter nitrate-binding protein [Bradyr... 864 0.0 ref|YP_001241293.1| putative nitrate ABC transporter substrate-b... 850 0.0 ref|YP_001204819.1| putative nitrate ABC transporter substrate-b... 843 0.0 ref|ZP_08629433.1| cyanate ABC transporter, substrate binding pr... 758 0.0 ref|YP_485672.1| twin-arginine translocation pathway signal [Rho... 751 0.0 >ref|NP_772374.1| ABC transporter nitrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC50999.1| ABC transporter nitrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 459 Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/462 (89%), Positives = 440/462 (95%), Gaps = 4/462 (0%) Query: 1 MSTSDDPFDADRVLTRSGCACGWHRSAAEHEQAARTLRCEPVADLSEQKRYEGIVASAVM 60 MST D+PFD DR L R+GCACG H+SAAEHEQA +RC + SE+KRYEG+VASAVM Sbjct: 1 MSTFDNPFDPDRNL-RAGCACGQHQSAAEHEQAT-AMRCAQIE--SEEKRYEGVVASAVM 56 Query: 61 RAVFPRDVARRSFLKSVGAATALAALSQFFPLKTATEAFADAGPPEKKDLKVGFIPITCA 120 RA+FP+DVARR+FLKSVGA+TALAALSQFFPL+TATE FA AG PEKKDLKVGFIPITCA Sbjct: 57 RAMFPQDVARRAFLKSVGASTALAALSQFFPLQTATEVFAQAGTPEKKDLKVGFIPITCA 116 Query: 121 TPIIMAAPLGFYAKQGLNVEVVKTAGWAVIRDKTINKEYDAAHMLAPMPLAISLGLGANA 180 TPIIMAAP+GFYAK GLNVEVVKTAGWAVIRDKTINKEYDAAHMLAPMP+AISLGLGANA Sbjct: 117 TPIIMAAPMGFYAKHGLNVEVVKTAGWAVIRDKTINKEYDAAHMLAPMPIAISLGLGANA 176 Query: 181 IPFTVPAIENINGQGITLATKHKDRRDPKDWKGMKFAIPFDYSMHNYLLRYYLAEHGLDP 240 IPF VPAIENINGQGI LATKHKD+RDPKDWKG+KFAIPFDYSMHNYLLRYYLAEHGLDP Sbjct: 177 IPFAVPAIENINGQGIVLATKHKDKRDPKDWKGLKFAIPFDYSMHNYLLRYYLAEHGLDP 236 Query: 241 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFLHILSKEIWDGHPCCSF 300 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGF+H+LSKEIWDGHPCCSF Sbjct: 237 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFMHLLSKEIWDGHPCCSF 296 Query: 301 AASREFITTAPNSFAALTRAIVDATGYAAKAENRKQIAEAIAPANYINAPVTVLEQVLTG 360 AASREFITTAPNSFAALTRAIVDAT YA+KAENRKQIAEAIAPANYINAPVTVLEQVLTG Sbjct: 297 AASREFITTAPNSFAALTRAIVDATAYASKAENRKQIAEAIAPANYINAPVTVLEQVLTG 356 Query: 361 TYADGLGGVKTDPKRVDFDPFPWQSFAVWMLTQMKRWGQIKGDVDYKAVAEQVYLATDTK 420 TYADGLGGVKTD KRVDFDPFPWQSFAVWMLTQMKRWGQIKGDVDYKAVAEQVYLATDTK Sbjct: 357 TYADGLGGVKTDAKRVDFDPFPWQSFAVWMLTQMKRWGQIKGDVDYKAVAEQVYLATDTK 416 Query: 421 KVMAEMGLAPPATSYKSFSVMGKSFDPAKPDDYLASFKIRKS 462 K+M EMGL+PPAT+YKSF+VMGK+FDPAKP+DYLASFKIRK+ Sbjct: 417 KLMTEMGLSPPATAYKSFAVMGKTFDPAKPEDYLASFKIRKA 458 >ref|YP_001241293.1| putative nitrate ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ37387.1| putative nitrate ABC transporter (Substrate-binding protein) (ntrA-like protein) [Bradyrhizobium sp. BTAi1] Length = 461 Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/463 (87%), Positives = 431/463 (93%), Gaps = 2/463 (0%) Query: 1 MSTSDDPFDADRVLTRSGCACGWHRSAAEHEQAARTLRCEPVADLSEQKRYEGIVASAVM 60 MS DDPFDAD + +GC CG HRS AEHE A R LRCEPV + S +KRYE +VASAV+ Sbjct: 1 MSIFDDPFDADSRVN-AGCICGQHRSPAEHEHALRALRCEPVVE-SAEKRYENVVASAVL 58 Query: 61 RAVFPRDVARRSFLKSVGAATALAALSQFFPLKTATEAFADAGPPEKKDLKVGFIPITCA 120 RAVFP+ RR+FLKSVGAATALAA+SQFFPLKTATEAFA+AG PEKKDLKVGFIPITCA Sbjct: 59 RAVFPQAATRRAFLKSVGAATALAAVSQFFPLKTATEAFAEAGAPEKKDLKVGFIPITCA 118 Query: 121 TPIIMAAPLGFYAKQGLNVEVVKTAGWAVIRDKTINKEYDAAHMLAPMPLAISLGLGANA 180 TPIIMAAPLGFYAK GLNVEVVKTAGWAVIRDKTINKEYDA+HMLAPMP+AISLGLGA Sbjct: 119 TPIIMAAPLGFYAKAGLNVEVVKTAGWAVIRDKTINKEYDASHMLAPMPIAISLGLGAQP 178 Query: 181 IPFTVPAIENINGQGITLATKHKDRRDPKDWKGMKFAIPFDYSMHNYLLRYYLAEHGLDP 240 IPFTVPAIENINGQGI L+ KHKD+RDPKDWKG+KFAIPFDYSMHNYLLRYYLAEHG+DP Sbjct: 179 IPFTVPAIENINGQGIVLSMKHKDKRDPKDWKGLKFAIPFDYSMHNYLLRYYLAEHGIDP 238 Query: 241 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFLHILSKEIWDGHPCCSF 300 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFLHILSKEIWDGHPCCSF Sbjct: 239 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFLHILSKEIWDGHPCCSF 298 Query: 301 AASREFITTAPNSFAALTRAIVDATGYAAKAENRKQIAEAIAPANYINAPVTVLEQVLTG 360 AASREFIT+APNSFAALTRAIVDAT YA+KA+NRKQIAEAIAPANYINAPVTVLEQVLTG Sbjct: 299 AASREFITSAPNSFAALTRAIVDATAYASKADNRKQIAEAIAPANYINAPVTVLEQVLTG 358 Query: 361 TYADGLGGVKTDPKRVDFDPFPWQSFAVWMLTQMKRWGQIKGDVDYKAVAEQVYLATDTK 420 TYADGLGGVKTDPKRVDFDPFPWQSFAVWMLTQMKRWGQIKGDVDYKAVAEQ+YLATDT+ Sbjct: 359 TYADGLGGVKTDPKRVDFDPFPWQSFAVWMLTQMKRWGQIKGDVDYKAVAEQIYLATDTR 418 Query: 421 KVMAEMGLAPPATSYKSFSVMGKSFDPAKPDDYLASFKIRKSS 463 KVM EMGL PP SYKSFSVMGK FDP KPDDY+ASFKI+K+S Sbjct: 419 KVMTEMGLTPPKDSYKSFSVMGKPFDPTKPDDYVASFKIKKAS 461 >ref|YP_001204819.1| putative nitrate ABC transporter substrate-binding protein (ntrA-like protein) [Bradyrhizobium sp. ORS 278] emb|CAL76582.1| putative nitrate ABC transporter (Substrate-binding protein) (ntrA-like protein) [Bradyrhizobium sp. ORS 278] Length = 460 Score = 843 bits (2177), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/463 (87%), Positives = 431/463 (93%), Gaps = 3/463 (0%) Query: 1 MSTSDDPFDADRVLTRSGCACGWHRSAAEHEQAARTLRCEPVADLSEQKRYEGIVASAVM 60 MS DDPFDA+ + +GC CG HRS AEH+ A LRC+PV + S+QKRYE +VASAV+ Sbjct: 1 MSIFDDPFDAESRVN-TGCICGEHRSPAEHDHA-MALRCDPVVE-SQQKRYENVVASAVL 57 Query: 61 RAVFPRDVARRSFLKSVGAATALAALSQFFPLKTATEAFADAGPPEKKDLKVGFIPITCA 120 RAVFP RR+FLK+VGAATALAA+SQFFPLKTATEAFA+ G PEKKDLKVGFIPITCA Sbjct: 58 RAVFPEAATRRAFLKTVGAATALAAVSQFFPLKTATEAFAETGAPEKKDLKVGFIPITCA 117 Query: 121 TPIIMAAPLGFYAKQGLNVEVVKTAGWAVIRDKTINKEYDAAHMLAPMPLAISLGLGANA 180 TPIIMAAPLGFY+K GLNVEVVKTAGWAVIRDKTINKEYDA+HMLAPMP+AISLGLGA Sbjct: 118 TPIIMAAPLGFYSKAGLNVEVVKTAGWAVIRDKTINKEYDASHMLAPMPIAISLGLGAQP 177 Query: 181 IPFTVPAIENINGQGITLATKHKDRRDPKDWKGMKFAIPFDYSMHNYLLRYYLAEHGLDP 240 IPFTVPAIENINGQGI L+ KHKD+RDPKDWKG+KFAIPFDYSMHNYLLRYYLAEHG+DP Sbjct: 178 IPFTVPAIENINGQGIVLSMKHKDKRDPKDWKGLKFAIPFDYSMHNYLLRYYLAEHGIDP 237 Query: 241 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFLHILSKEIWDGHPCCSF 300 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFLHILSKEIWDGHPCCSF Sbjct: 238 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFLHILSKEIWDGHPCCSF 297 Query: 301 AASREFITTAPNSFAALTRAIVDATGYAAKAENRKQIAEAIAPANYINAPVTVLEQVLTG 360 AASR+FITTAPNSFAALTRAIVDAT YAAKAENRKQIAEAIAPANYINAPVTVLEQVLTG Sbjct: 298 AASRDFITTAPNSFAALTRAIVDATAYAAKAENRKQIAEAIAPANYINAPVTVLEQVLTG 357 Query: 361 TYADGLGGVKTDPKRVDFDPFPWQSFAVWMLTQMKRWGQIKGDVDYKAVAEQVYLATDTK 420 TYADGLGGVKTDPKRVDFDPFPWQSFAVWMLTQMKRWGQIKG+VDYKAVAEQ+YLATDT+ Sbjct: 358 TYADGLGGVKTDPKRVDFDPFPWQSFAVWMLTQMKRWGQIKGEVDYKAVAEQIYLATDTR 417 Query: 421 KVMAEMGLAPPATSYKSFSVMGKSFDPAKPDDYLASFKIRKSS 463 KVM EMGL PPA SYKSFSVMGKSFDP KPDDY+ASFKI+K+S Sbjct: 418 KVMTEMGLTPPAESYKSFSVMGKSFDPTKPDDYVASFKIKKAS 460 >ref|ZP_08629433.1| cyanate ABC transporter, substrate binding protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP07926.1| cyanate ABC transporter, substrate binding protein [Bradyrhizobiaceae bacterium SG-6C] Length = 460 Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/463 (74%), Positives = 409/463 (88%), Gaps = 3/463 (0%) Query: 1 MSTSDDPFDADRVLTRSGCACGWHRSAAEHEQAARTLRCEPVADLSEQKRYEGIVASAVM 60 MST D+ FD +R L+ GC+CG H S AEH+ +LR + V+ S+++ YEG+VASAVM Sbjct: 1 MSTFDNAFDPNRRLSSFGCSCGQHASHAEHDA---SLRLQTVSSQSDEQHYEGVVASAVM 57 Query: 61 RAVFPRDVARRSFLKSVGAATALAALSQFFPLKTATEAFADAGPPEKKDLKVGFIPITCA 120 RA+FP+DVARR+FLKSVGAATALAA+SQFFPLKTATEAFA GP EKKDLKVGFIPITCA Sbjct: 58 RAMFPQDVARRAFLKSVGAATALAAVSQFFPLKTATEAFAAGGPLEKKDLKVGFIPITCA 117 Query: 121 TPIIMAAPLGFYAKQGLNVEVVKTAGWAVIRDKTINKEYDAAHMLAPMPLAISLGLGANA 180 TPIIMA P+GFY KQGLNV+V+KTAGWAV+RDKTINKEYDAAHML+PMP+AIS+G G+N Sbjct: 118 TPIIMAKPMGFYEKQGLNVDVIKTAGWAVVRDKTINKEYDAAHMLSPMPIAISMGAGSNP 177 Query: 181 IPFTVPAIENINGQGITLATKHKDRRDPKDWKGMKFAIPFDYSMHNYLLRYYLAEHGLDP 240 IP+T+PA+ENINGQ ITLA KHKD+R+PKDWKG KFA+PFDYSMHNYLLRYYLAEHGLDP Sbjct: 178 IPYTMPAVENINGQAITLAMKHKDKRNPKDWKGFKFAVPFDYSMHNYLLRYYLAEHGLDP 237 Query: 241 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFLHILSKEIWDGHPCCSF 300 DTDVQ+R+VPPPEMVANLRADNIDG+L PD + QRA+YDGVGF+HIL+K+IWDGHPCC+F Sbjct: 238 DTDVQIRAVPPPEMVANLRADNIDGYLGPDPMNQRAVYDGVGFIHILTKDIWDGHPCCAF 297 Query: 301 AASREFITTAPNSFAALTRAIVDATGYAAKAENRKQIAEAIAPANYINAPVTVLEQVLTG 360 AAS+EF+TT PN++AAL ++I+DAT +A KAENRKQIAEAI+PANY+N P VLEQ+LTG Sbjct: 298 AASKEFVTTMPNTYAALLKSIIDATAFAHKAENRKQIAEAISPANYLNQPAIVLEQILTG 357 Query: 361 TYADGLGGVKTDPKRVDFDPFPWQSFAVWMLTQMKRWGQIKGDVDYKAVAEQVYLATDTK 420 T+ADGLG + P RVDFDPFPWQSFAVW++TQMKRWGQIKG+VDY +A QVYLATDT Sbjct: 358 TFADGLGNIIKQPNRVDFDPFPWQSFAVWIMTQMKRWGQIKGEVDYAGIASQVYLATDTA 417 Query: 421 KVMAEMGLAPPATSYKSFSVMGKSFDPAKPDDYLASFKIRKSS 463 K+M E+GL PP + KSFSVMGK+FDP+KP+DYL SFKI K+S Sbjct: 418 KLMKEVGLTPPTATTKSFSVMGKTFDPSKPEDYLKSFKISKAS 460 >ref|YP_485672.1| twin-arginine translocation pathway signal [Rhodopseudomonas palustris HaA2] gb|ABD06761.1| Twin-arginine translocation pathway signal [Rhodopseudomonas palustris HaA2] Length = 462 Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/463 (74%), Positives = 407/463 (87%), Gaps = 1/463 (0%) Query: 1 MSTSDDPFDADRVLTRSGCACGWHRSAAEHEQAARTLRCEPVADLSEQKRYEGIVASAVM 60 MST D+PFD +R LT GC+CG H + AEH A + +P S+ K++EG+VASAVM Sbjct: 1 MSTFDNPFDPNRRLTAGGCSCGRHVNEAEH-AADPSSALQPTMLESDDKKFEGVVASAVM 59 Query: 61 RAVFPRDVARRSFLKSVGAATALAALSQFFPLKTATEAFADAGPPEKKDLKVGFIPITCA 120 RA+FP+D +RR+FLKSVGAATALAA+SQFFPL+TATEAFA GP EKKDLKVGFIPITCA Sbjct: 60 RAMFPQDASRRAFLKSVGAATALAAISQFFPLQTATEAFASGGPLEKKDLKVGFIPITCA 119 Query: 121 TPIIMAAPLGFYAKQGLNVEVVKTAGWAVIRDKTINKEYDAAHMLAPMPLAISLGLGANA 180 TPIIMAAP+GFY+K LNVEV+KTAGWAVIRDKTINKEYDAAHML+PMPLAI++G+G+N Sbjct: 120 TPIIMAAPMGFYSKYSLNVEVIKTAGWAVIRDKTINKEYDAAHMLSPMPLAITMGVGSNP 179 Query: 181 IPFTVPAIENINGQGITLATKHKDRRDPKDWKGMKFAIPFDYSMHNYLLRYYLAEHGLDP 240 IP+T+PA+ENINGQ ITLA KHKD+R+PKDWKG KFA+PFDYSMHNYLLRYYLAEHGLDP Sbjct: 180 IPYTMPAVENINGQAITLAMKHKDKRNPKDWKGFKFAVPFDYSMHNYLLRYYLAEHGLDP 239 Query: 241 DTDVQLRSVPPPEMVANLRADNIDGFLAPDNICQRAIYDGVGFLHILSKEIWDGHPCCSF 300 D DVQ+R+VPPPEMVANLRADNIDG+LAPD + QRA+YDGVGF+HIL+KEIWDGHPCC+F Sbjct: 240 DVDVQIRAVPPPEMVANLRADNIDGYLAPDPMNQRAVYDGVGFIHILTKEIWDGHPCCAF 299 Query: 301 AASREFITTAPNSFAALTRAIVDATGYAAKAENRKQIAEAIAPANYINAPVTVLEQVLTG 360 AAS+EF+TT PN++ AL ++I++AT YA K ENRK+IA AIAPANY+N P VLEQ+LTG Sbjct: 300 AASKEFVTTMPNTYGALLKSIIEATAYAHKPENRKEIAAAIAPANYLNQPAIVLEQILTG 359 Query: 361 TYADGLGGVKTDPKRVDFDPFPWQSFAVWMLTQMKRWGQIKGDVDYKAVAEQVYLATDTK 420 TYADGLG + P R+DFDPFPWQSFAVW++TQMKRWGQ+KGDVDYKA+AEQVYLATDT Sbjct: 360 TYADGLGNIIKQPNRIDFDPFPWQSFAVWIMTQMKRWGQVKGDVDYKAIAEQVYLATDTA 419 Query: 421 KVMAEMGLAPPATSYKSFSVMGKSFDPAKPDDYLASFKIRKSS 463 K+M E GL PP T+ +SFSVMGKSFD + P++YLASFKI+K+S Sbjct: 420 KLMKEAGLTPPTTTSRSFSVMGKSFDGSNPEEYLASFKIKKAS 462