BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0084.0007.p         (163 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08630585.1| protein of unknown function DUF336 [Bradyrhiz...   213   9e-54
ref|YP_002363398.1| hypothetical protein Msil_3127 [Methylocella...   127   8e-28
ref|ZP_06889931.1| protein of unknown function DUF336 [Methylosi...   126   1e-27
ref|YP_003280337.1| GlcG [Comamonas testosteroni CNB-2] >gi|2622...   124   6e-27
ref|ZP_07046400.1| GlcG [Comamonas testosteroni S44] >gi|2987192...   121   4e-26

>ref|ZP_08630585.1| protein of unknown function DUF336 [Bradyrhizobiaceae bacterium
           SG-6C]
 gb|EGP06964.1| protein of unknown function DUF336 [Bradyrhizobiaceae bacterium
           SG-6C]
          Length = 163

 Score =  213 bits (541), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 106/163 (65%), Positives = 126/163 (77%)

Query: 1   MRRFSLALFSSVTVLTATPALAQAPLVEKNVSMAMSLAIMQAALDQCTKDGYKVSVVIVD 60
           MR  + A F++  +L A  A AQAP+++KNVS AM++AI+Q  ++QC KDGYKVSV +VD
Sbjct: 1   MRSVAFAAFTTAAILAAGSAHAQAPVMDKNVSTAMAMAIVQGTMEQCAKDGYKVSVTVVD 60

Query: 61  KGGNVAASVRGDGTGPHTMEFARMKAYTARTRSQTSLATMKQMEDPANAFLKQIPNVVGV 120
           K GNV A VRGDGT PHTMEF+R+KAYTARTR+QTSL   K  E P  A+L+QIP VVG 
Sbjct: 61  KAGNVFAQVRGDGTSPHTMEFSRLKAYTARTRNQTSLEFQKLTEKPETAYLRQIPGVVGA 120

Query: 121 GGGVPIKAGNEVIGGVGVSGAPGGEKDEVCANAGLAKVADALK 163
           GG VPIK GNE IG VG SGAPGG+KDEVC  AG+AKV DALK
Sbjct: 121 GGAVPIKVGNETIGAVGASGAPGGDKDEVCVLAGVAKVQDALK 163


>ref|YP_002363398.1| hypothetical protein Msil_3127 [Methylocella silvestris BL2]
 gb|ACK52036.1| protein of unknown function DUF336 [Methylocella silvestris BL2]
          Length = 165

 Score =  127 bits (318), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 67/147 (45%), Positives = 94/147 (63%), Gaps = 1/147 (0%)

Query: 17  ATPALAQAPLVEKNVSMAMSLAIMQAALDQCTKDGYKVSVVIVDKGGNVAASVRGDGTGP 76
           A PA A+  L EK++S  ++L I Q+A + C K GY VSV +V + G +  ++RGD + P
Sbjct: 20  AAPAHAEL-LTEKSLSTQVALEIAQSAYESCAKQGYHVSVHVVGREGQLLVAIRGDDSSP 78

Query: 77  HTMEFARMKAYTARTRSQTSLATMKQMEDPANAFLKQIPNVVGVGGGVPIKAGNEVIGGV 136
           HT+E +  KAYTART   +S    ++++D     L  +  V+   G +PIK G+E+IG V
Sbjct: 79  HTLENSLRKAYTARTFRTSSGEIAQRLKDNPALGLVHLNGVIAAQGALPIKVGDEIIGAV 138

Query: 137 GVSGAPGGEKDEVCANAGLAKVADALK 163
           GVSGAPGG+KDE C+ AGL K A  LK
Sbjct: 139 GVSGAPGGDKDESCSKAGLDKAAAELK 165


>ref|ZP_06889931.1| protein of unknown function DUF336 [Methylosinus trichosporium
           OB3b]
 gb|EFH01602.1| protein of unknown function DUF336 [Methylosinus trichosporium
           OB3b]
          Length = 166

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 64/136 (47%), Positives = 89/136 (65%)

Query: 28  EKNVSMAMSLAIMQAALDQCTKDGYKVSVVIVDKGGNVAASVRGDGTGPHTMEFARMKAY 87
            K + +A +L+I Q A D C + G++VSV +V   G    ++RGDG  PHT+E ++ KAY
Sbjct: 31  HKFLPVAAALSIAQGAYDACIQQGHRVSVTVVGGEGQTIVALRGDGASPHTLENSQRKAY 90

Query: 88  TARTRSQTSLATMKQMEDPANAFLKQIPNVVGVGGGVPIKAGNEVIGGVGVSGAPGGEKD 147
           T+RT    S    ++++D     L  +  VV + G +PIK G+E+IG VGVSGAPGGEKD
Sbjct: 91  TSRTFRAPSGDIAQRVKDNPGLGLVHLTGVVAIQGALPIKVGDEIIGAVGVSGAPGGEKD 150

Query: 148 EVCANAGLAKVADALK 163
           EVCA AG+ K+AD LK
Sbjct: 151 EVCAKAGIDKIADQLK 166


>ref|YP_003280337.1| GlcG [Comamonas testosteroni CNB-2]
 gb|ACY35041.1| GlcG [Comamonas testosteroni CNB-2]
          Length = 164

 Score =  124 bits (310), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/145 (46%), Positives = 91/145 (62%), Gaps = 1/145 (0%)

Query: 20  ALAQAPLVEKNVSMAMSLAIMQAALDQCTKDGYKVSVVIVDKGGNVAASVRGDGTGPHTM 79
           A AQA   EKN+S+ ++  I   ++  C  + Y V+  +VD+ G V A  R D  GPHT+
Sbjct: 20  ANAQAVRTEKNMSLELANQIAAQSVSACAANSYAVTATVVDRAGGVRAVQRADNAGPHTV 79

Query: 80  EFARMKAYTARTRSQTSLATMKQMEDPANAF-LKQIPNVVGVGGGVPIKAGNEVIGGVGV 138
           E +R KA+T+ +    +LA M+  +  A A  LK IP  + +GGGVP+K GNEVIG VGV
Sbjct: 80  EASREKAFTSASAKAPTLAIMENSQKNAGAANLKDIPGFLLLGGGVPVKVGNEVIGAVGV 139

Query: 139 SGAPGGEKDEVCANAGLAKVADALK 163
           +GAPGG  D+ CA A LAKV D LK
Sbjct: 140 AGAPGGHLDDQCAQAALAKVQDLLK 164


>ref|ZP_07046400.1| GlcG [Comamonas testosteroni S44]
 gb|EFI60207.1| GlcG [Comamonas testosteroni S44]
          Length = 164

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 67/145 (46%), Positives = 89/145 (61%), Gaps = 1/145 (0%)

Query: 20  ALAQAPLVEKNVSMAMSLAIMQAALDQCTKDGYKVSVVIVDKGGNVAASVRGDGTGPHTM 79
           A AQ    EKN+S+ ++  I   ++  C    Y V+  +VD+ G V A  R D  GPHT+
Sbjct: 20  ANAQGVRTEKNMSLELANQIAAQSVSACAASSYAVTATVVDRAGGVRAVQRADNAGPHTV 79

Query: 80  EFARMKAYTARTRSQTSLATMKQMEDPANAF-LKQIPNVVGVGGGVPIKAGNEVIGGVGV 138
           E +R KA+T+ +    +LA M+  +  A A  LK IP  + +GGGVP+K GNEVIG VGV
Sbjct: 80  EASREKAFTSASAKAPTLAIMENSQKNAGAANLKDIPGFLLLGGGVPVKVGNEVIGAVGV 139

Query: 139 SGAPGGEKDEVCANAGLAKVADALK 163
           +GAPGG  D+ CA A LAKV D LK
Sbjct: 140 AGAPGGHLDDQCAQAALAKVQDLLK 164