BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0084.0005.p (412 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08628359.1| hypothetical protein CSIRO_1433 [Bradyrhizobi... 475 e-132 ref|NP_770952.1| hypothetical protein blr4312 [Bradyrhizobium ja... 463 e-128 ref|YP_485358.1| extracellular ligand-binding receptor [Rhodopse... 450 e-124 ref|ZP_08628356.1| hypothetical protein CSIRO_1430 [Bradyrhizobi... 444 e-122 ref|NP_774469.1| hypothetical protein blr7829 [Bradyrhizobium ja... 444 e-122 >ref|ZP_08628359.1| hypothetical protein CSIRO_1433 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08862.1| hypothetical protein CSIRO_1433 [Bradyrhizobiaceae bacterium SG-6C] Length = 409 Score = 475 bits (1223), Expect = e-132, Method: Compositional matrix adjust. Identities = 221/369 (59%), Positives = 285/369 (77%) Query: 41 TEIVIGNIDAYSGPAAVYSSIGRTPGGYFKMINEQGGINGRMIKYITYDDAYSPAKTVEQ 100 TEI IGNI YSGPA+ Y IG+ YFKMINEQGGINGR I +ITYDD YSP K VEQ Sbjct: 38 TEIKIGNIMPYSGPASAYGVIGKMEEAYFKMINEQGGINGRKINFITYDDGYSPPKAVEQ 97 Query: 101 ARKLVEGDEIDVLFSPLGAPTNAAIMKYMNQKKIPHLFIASGATKFGDHKNFPYTMGFMP 160 ARKLVE DE+ ++F PLG P+N+AI KY+N KK+P LF+A+GATKFG+ K FP+TMG+ P Sbjct: 98 ARKLVESDEVLLVFGPLGTPSNSAIQKYLNAKKVPQLFVATGATKFGEPKEFPWTMGWQP 157 Query: 161 CYQIEGRTFAQHVLATQPDAKIGIIYQNDDFGRDVLKGFKDGLGGRTSSIVAELSYETSD 220 YQ E R +A+++LA +PDAKI ++YQNDDFG+D+LKG KDGLG + S IVAE SYE S+ Sbjct: 158 AYQSESRVYAKYLLANKPDAKIAVMYQNDDFGKDMLKGLKDGLGAKASQIVAEDSYEVSE 217 Query: 221 PTIDSQVVRCKSAGANVFMSMTTPKFAAQGIKKVAELNWQPTHYIGNNASSAGSTLKAAG 280 PTIDS +++ K++GA+VF+S TTPKFAAQ IKKVAEL W+PT+ N +S GS LK AG Sbjct: 218 PTIDSHIIKLKASGADVFVSFTTPKFAAQAIKKVAELGWKPTYIQSNVGASVGSVLKPAG 277 Query: 281 FDISKGIISSAYMKDPVDAAWDSDPAVVKWRAFLDKYDPAAAKNDIYAAIAYVVSQVMVQ 340 F+ ++GI+S+AY KD D WD+D + K+ AFL KY P K D Y +Q MVQ Sbjct: 278 FENAQGILSAAYAKDGADPQWDNDEGMKKFYAFLAKYAPDMNKTDGSVVYGYGQAQTMVQ 337 Query: 341 VLKQCGDDVSSESIIKQAANLRDFESDLLLSGIKVNTSPTDYYPLEQLQLVRFSGERYEI 400 VLKQ GD+++ E+I+KQAA+L+DF D LL G+K+NTSPTD+YP++QLQ+++F GE+YE+ Sbjct: 338 VLKQAGDNLTRENIMKQAASLKDFVPDTLLPGVKINTSPTDFYPIDQLQIMQFKGEKYEL 397 Query: 401 LGPVIDGGI 409 GP+I GG+ Sbjct: 398 QGPIITGGM 406 >ref|NP_770952.1| hypothetical protein blr4312 [Bradyrhizobium japonicum USDA 110] dbj|BAC49577.1| blr4312 [Bradyrhizobium japonicum USDA 110] Length = 411 Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust. Identities = 223/407 (54%), Positives = 292/407 (71%), Gaps = 9/407 (2%) Query: 9 PTRRHLIKGAAATSATLLLGKPAVAKGKTE---GKTEIVIGNIDAYSGPAAVYSSIGRTP 65 P RR + A +A +L PA A+ K + T+I IGNI YSGPA+ Y IG+T Sbjct: 2 PGRRKNLAALAMLAAVVLAATPASAQKKYDPGASDTDIKIGNIMPYSGPASSYGVIGKTE 61 Query: 66 GGYFKMINEQGGINGRMIKYITYDDAYSPAKTVEQARKLVEGDEIDVLFSPLGAPTNAAI 125 +F+MIN+QGGINGR I +I+YDDAYSP K +EQARKLVE DE+ ++F PLG P+N+AI Sbjct: 62 AAFFRMINDQGGINGRKINFISYDDAYSPPKAIEQARKLVESDEVLLIFQPLGTPSNSAI 121 Query: 126 MKYMNQKKIPHLFIASGATKFGDHKNFPYTMGFMPCYQIEGRTFAQHVLATQPDAKIGII 185 MKYMN KK+P LF+ASG TKFGD +NFP+TMGF P YQ EGR +A+++ P+ KI + Sbjct: 122 MKYMNAKKVPQLFVASGGTKFGDPRNFPWTMGFQPNYQSEGRIYAKYIRDNFPNGKIAVF 181 Query: 186 YQNDDFGRDVLKGFKDGLGGRTSSIVAELSYETSDPTIDSQVVRCKSAGANVFMSMTTPK 245 +QNDD G+D KG KDGLG + I+A+ SYE SDP+IDSQ+V +GA++F S PK Sbjct: 182 WQNDDAGKDQFKGLKDGLGDKAGMIIADKSYEVSDPSIDSQIVALHDSGADIFFSWAAPK 241 Query: 246 FAAQGIKKVAELNWQPTHYIGNNASSAGSTLKAAGFDISKGIISSAYMKDPVDAAWDSDP 305 +AQ I+KV EL W+P ++ N A+S S LK AG D SK IIS+ Y+KDP D WD DP Sbjct: 242 GSAQAIRKVGELGWKPKFFLANTATSVASVLKPAGLDYSKDIISTVYLKDPTDPTWDKDP 301 Query: 306 AVVKWRAFLDKYDP---AAAKNDIYAAIAYVVSQVMVQVLKQCGDDVSSESIIKQAANLR 362 AVVKWR F+DKY P A N+IY YV ++ M QVLKQCGD+++ E+++KQAANL+ Sbjct: 302 AVVKWREFMDKYYPDGDKANSNNIY---GYVQAEAMAQVLKQCGDNLTRENVMKQAANLK 358 Query: 363 DFESDLLLSGIKVNTSPTDYYPLEQLQLVRFSGERYEILGPVIDGGI 409 DF +DL+L GI VNTSP DY+P+EQ+QL+RF+G+ +E+ G VI G + Sbjct: 359 DFHTDLMLPGIMVNTSPDDYFPIEQMQLMRFNGQAWELFGDVITGEV 405 >ref|YP_485358.1| extracellular ligand-binding receptor [Rhodopseudomonas palustris HaA2] gb|ABD06447.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris HaA2] Length = 410 Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust. Identities = 205/372 (55%), Positives = 280/372 (75%), Gaps = 1/372 (0%) Query: 41 TEIVIGNIDAYSGPAAVYSSIGRTPGGYFKMINEQGGINGRMIKYITYDDAYSPAKTVEQ 100 TEI IGNI YSGPA+ Y +IG+T YF+M+NE GGINGR + +I+YDDAYSP K VEQ Sbjct: 39 TEIKIGNIMPYSGPASAYGTIGKTEEAYFRMVNENGGINGRKVNFISYDDAYSPPKAVEQ 98 Query: 101 ARKLVEGDEIDVLFSPLGAPTNAAIMKYMNQKKIPHLFIASGATKFGDHKNFPYTMGFMP 160 RKLVE DE+ +F+PLG P+N A+ KY+N KK+P LF+A+GATK+ D KNFP+T+G+ P Sbjct: 99 VRKLVESDEVLAVFNPLGTPSNTAVQKYLNAKKVPQLFVATGATKWNDSKNFPWTIGWQP 158 Query: 161 CYQIEGRTFAQHVLATQPDAKIGIIYQNDDFGRDVLKGFKDGLGGRTSS-IVAELSYETS 219 YQ E + +A+++L +PDAKIGI+YQNDDFG+D LKG KDGLG + +S I+AE SYE S Sbjct: 159 SYQSEAQIYAKYLLKEKPDAKIGILYQNDDFGKDYLKGTKDGLGAKAASMIIAEESYEIS 218 Query: 220 DPTIDSQVVRCKSAGANVFMSMTTPKFAAQGIKKVAELNWQPTHYIGNNASSAGSTLKAA 279 PTIDS VV+ KSA +V + TTPKFAAQ IKK+AEL+W+P + N ++S GS ++ A Sbjct: 219 APTIDSNVVKLKSANPDVVLVYTTPKFAAQTIKKIAELSWKPLVILTNVSASVGSVMQPA 278 Query: 280 GFDISKGIISSAYMKDPVDAAWDSDPAVVKWRAFLDKYDPAAAKNDIYAAIAYVVSQVMV 339 GF+ ++G++S+ Y KDP D WDSDP KW AF++KY P + KND Y +Q + Sbjct: 279 GFENAQGVLSANYAKDPTDQQWDSDPKFKKWHAFVEKYMPGSNKNDSNMVYGYGAAQTLH 338 Query: 340 QVLKQCGDDVSSESIIKQAANLRDFESDLLLSGIKVNTSPTDYYPLEQLQLVRFSGERYE 399 +VL+ CGDD++ +++KQAA+L+DFE D LL G+K+NTS TD+ P+ QLQ++RF G+R+E Sbjct: 339 KVLEMCGDDLTRANLMKQAASLKDFEPDTLLPGVKINTSATDFAPISQLQMMRFKGDRWE 398 Query: 400 ILGPVIDGGISK 411 + G +I G I++ Sbjct: 399 LFGEIISGDITQ 410 >ref|ZP_08628356.1| hypothetical protein CSIRO_1430 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08859.1| hypothetical protein CSIRO_1430 [Bradyrhizobiaceae bacterium SG-6C] Length = 409 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 209/370 (56%), Positives = 276/370 (74%), Gaps = 1/370 (0%) Query: 41 TEIVIGNIDAYSGPAAVYSSIGRTPGGYFKMINEQGGINGRMIKYITYDDAYSPAKTVEQ 100 TEI IGNI YSGPA+ Y IG+T YF IN +GGINGR I +I+YDD YSP K VEQ Sbjct: 38 TEIKIGNIMPYSGPASAYGIIGKTQAAYFNKINAEGGINGRKINFISYDDGYSPPKAVEQ 97 Query: 101 ARKLVEGDEIDVLFSPLGAPTNAAIMKYMNQKKIPHLFIASGATKFGDHKNFPYTMGFMP 160 ARKLVE DE+ ++F+ LG P+N+AI KYMN KK+P LF+A+GATK+ D KNFP+TMG+ P Sbjct: 98 ARKLVESDEVLLIFNSLGTPSNSAIQKYMNAKKVPQLFVATGATKWNDPKNFPWTMGWQP 157 Query: 161 CYQIEGRTFAQHVLATQPDAKIGIIYQNDDFGRDVLKGFKDGLGGRTSS-IVAELSYETS 219 YQ EG +A++++ +P+ KIGI+YQNDDFG+DVLKG KDGLG + +S IVAE YETS Sbjct: 158 NYQSEGVIYAKYLMKEKPNGKIGILYQNDDFGKDVLKGLKDGLGAKGASMIVAEEPYETS 217 Query: 220 DPTIDSQVVRCKSAGANVFMSMTTPKFAAQGIKKVAELNWQPTHYIGNNASSAGSTLKAA 279 PT+DSQ+V KS GA+VF+S+TTPKF AQ IKKVAEL W+P + N ASS GS +K A Sbjct: 218 VPTVDSQIVALKSKGADVFVSITTPKFGAQSIKKVAELGWKPLFILNNVASSTGSVIKPA 277 Query: 280 GFDISKGIISSAYMKDPVDAAWDSDPAVVKWRAFLDKYDPAAAKNDIYAAIAYVVSQVMV 339 GF+ ++G+IS+ Y KDP D W DP V + AFL KY P A + D A Y +Q MV Sbjct: 278 GFENAQGVISATYGKDPTDPQWKDDPGVKNFDAFLAKYFPEANRADSSVAFGYSSAQTMV 337 Query: 340 QVLKQCGDDVSSESIIKQAANLRDFESDLLLSGIKVNTSPTDYYPLEQLQLVRFSGERYE 399 VLK CGD+++ +++KQAA+++D + ++ L GIK+NTS TD+ P+ QLQL++F+GER++ Sbjct: 338 HVLKMCGDNLTRANVMKQAASIKDLQLEMGLPGIKLNTSATDFAPISQLQLMKFTGERWQ 397 Query: 400 ILGPVIDGGI 409 + GP+I G + Sbjct: 398 LFGPIISGDV 407 >ref|NP_774469.1| hypothetical protein blr7829 [Bradyrhizobium japonicum USDA 110] dbj|BAC53094.1| blr7829 [Bradyrhizobium japonicum USDA 110] Length = 409 Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust. Identities = 207/366 (56%), Positives = 278/366 (75%), Gaps = 1/366 (0%) Query: 41 TEIVIGNIDAYSGPAAVYSSIGRTPGGYFKMINEQGGINGRMIKYITYDDAYSPAKTVEQ 100 TEI IGNI YSGPA+ Y IGRT YFK INE+GGINGR I YI+YDDAYSP KTVEQ Sbjct: 38 TEIKIGNIMPYSGPASAYGIIGRTEAAYFKKINEEGGINGRKINYISYDDAYSPPKTVEQ 97 Query: 101 ARKLVEGDEIDVLFSPLGAPTNAAIMKYMNQKKIPHLFIASGATKFGDHKNFPYTMGFMP 160 ARKLVE DE+ +F+ LG P N+AI KYMN KK+P LF+A+GATK+ D +NFP+TMG+ P Sbjct: 98 ARKLVESDEVLFIFNSLGTPPNSAIQKYMNSKKVPQLFVATGATKWNDPQNFPWTMGWQP 157 Query: 161 CYQIEGRTFAQHVLATQPDAKIGIIYQNDDFGRDVLKGFKDGLGGRTSS-IVAELSYETS 219 YQ E + +A+ +L +PDAKI ++YQNDD+G+D LKG KDGLG + +S IV E SYETS Sbjct: 158 NYQSETQIYAKWLLKNKPDAKIAVLYQNDDYGKDYLKGLKDGLGAKAASMIVIEESYETS 217 Query: 220 DPTIDSQVVRCKSAGANVFMSMTTPKFAAQGIKKVAELNWQPTHYIGNNASSAGSTLKAA 279 +PTID+ +V+ KS GA+VFM++TTPKFAAQ IKK +E+ W+P H++ N ++S GS +K A Sbjct: 218 EPTIDNHIVKLKSTGADVFMNITTPKFAAQAIKKNSEIGWKPLHFLNNVSASVGSVMKPA 277 Query: 280 GFDISKGIISSAYMKDPVDAAWDSDPAVVKWRAFLDKYDPAAAKNDIYAAIAYVVSQVMV 339 GF+ + IIS+ Y+KD D AW++D + ++ AF+ KY P K D + + V+Q +V Sbjct: 278 GFENGQDIISADYLKDVSDPAWNNDAGMKEFLAFMTKYFPEGDKLDKGTIVGFAVAQTVV 337 Query: 340 QVLKQCGDDVSSESIIKQAANLRDFESDLLLSGIKVNTSPTDYYPLEQLQLVRFSGERYE 399 QVLKQCGD+++ E+I+K+AANL++F ++ LL GI++NT P D+ P+ QLQL +F GER+E Sbjct: 338 QVLKQCGDNLTRENIMKEAANLKNFRTEALLPGIQINTGPNDFAPISQLQLEKFKGERWE 397 Query: 400 ILGPVI 405 + G VI Sbjct: 398 LFGDVI 403