BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0083.0004.p (755 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08868995.1| hypothetical protein AZA_88680 [Azospirillum ... 406 e-111 ref|ZP_02379116.1| hypothetical protein BuboB_15400 [Burkholderi... 38 8.1 >ref|ZP_08868995.1| hypothetical protein AZA_88680 [Azospirillum amazonense Y2] gb|EGY01413.1| hypothetical protein AZA_88680 [Azospirillum amazonense Y2] Length = 676 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 305/652 (46%), Positives = 392/652 (60%), Gaps = 15/652 (2%) Query: 67 LDRLRRDGAGIRNDDVAVRARLAHPVGAVGDVALQVRGHDPLRLLQRPRRESQVNRTALG 126 L RL R GA I + ++ VR R A PV A D ++ V+ PL LL E+QV A+ Sbjct: 3 LQRLGRQGAAIGDGELRVRRRRAQPVPACDD-SVAVQAQFPLGLLHLAGGEAQVEGAAV- 60 Query: 127 ALALHVAKAPAHDHGKFIDKGRIERGEPVLPDPDQGRLDRLMRAAFRRQRDARRRRRHHE 186 LHV + P HD +FID G + G+ DQ R D L+R A RRQ DAR HHE Sbjct: 61 -RPLHVVETPGHDGRQFIDIGGLIAGDVGQAHADQRRGDGLVRPALRRQGDARGGGHHHE 119 Query: 187 AGILVAGVVQRIETAFDEGIVQRADRQEPRTIDLVRQAERRQHDEQIHLGDAELEVLSFR 246 AG+LV VV ++ A DEG+V+RAD Q+P ++ +A+ RQH+EQ+ LGD +L+VL+ Sbjct: 120 AGVLVGRVVHGVQAALDEGVVERADGQQPGAEQVMAEAQGRQHEEQVVLGDTQLDVLAAG 179 Query: 247 RIFPGVGGRDLLLPEQVVVLRLREQAAAVDPGAEIGRHGDIGRCGDDARGEFAIAARQLV 306 R P +GG LL E V+ L +QAA V PGA++G HGD+ GDD+ G+ +A L Sbjct: 180 RALPALGGNHLLFAEDVLRLGTGKQAAPVHPGAQVGGHGDVRGGGDDSGGQVIVALGDLT 239 Query: 307 QHEAKTLLRRHLRRGLEGQPFRHIDFRRRQAAAPLAVERRLGE-----ERLELRRLLRQA 361 Q+ A+ LLRRH + Q H D QAAA L LGE E ++ RR+ QA Sbjct: 240 QNLAEPLLRRHAGTQIHRQGRWHGDDGALQAAARLTGTSTLGEGHLRQEGIQRRRIDVQA 299 Query: 362 LELVPLVAGADVLRGAPLL---HLRHRHQAGVVVLVALHRQADTLDGVGDEADRPIMVDR 418 VP +A VL+ A L HL HQAG++VLV+L Q LD +GDE R I+ Sbjct: 300 SVAVPFLA---VLQPAGSLEGGHLVGVHQAGMIVLVSLEGQTAALDRIGDETGRAIVGGA 356 Query: 419 LEGLDHARHVVAAEVGHQRQQLVVAAALDQRRHLALVADVVAQMLAERGAALEAQRGVHL 478 +EGL V+A +VGH+ Q V + A VA +V Q LA G ALE QRG+ L Sbjct: 357 VEGLKQGGQVMARQVGHEGAQSRVVMGVKDVTDAARVAQIVGQRLAPGGPALEGQRGIQL 416 Query: 479 VRAIVDPAPQRLAAGLGERLEHQLAVLHDHHVPAEVAEHGLELGPQSLAHHGVERLPVVV 538 V A VDP Q +AA L ER LAVL D HVP + AEH L+ P+ + HH V+ L VVV Sbjct: 417 VGAGVDPLAQGVAALLRERGLQLLAVLQDLHVPVQGAEHALDGHPKPVRHHAVQALAVVV 476 Query: 539 DHPPGVAQAVLPALEQRLEDVALVHLGVADQRDHAALRPVVQPAMRLDVVLHQRGKQRLR 598 D PPGVAQ VLP+L+ EDVALVHLGVA Q HAALR +V+ A + +VLHQ G+ R Sbjct: 477 DDPPGVAQVVLPSLQHGFEDVALVHLGVAHQGHHAALR-LVRQAFQAHIVLHQGGEGGDR 535 Query: 599 DAEADRAGGEVDVVAVLGARRVGLRALVAAKILQLVAGLVAEQILDGVKHRARMRLHRDA 658 +A+ G ++DV+ VLGAR V LR A+ LQL+ L A+ +LDGV+ A +RLHR Sbjct: 536 HPQANGTGRKIDVLRVLGARGVALRPAQGAEALQLLPRLAAQHVLDGVEDGAGVRLHRHP 595 Query: 659 VLRAQHREIKRRHDVGERGRRRLVAADLQPVGREPHMVGVMDGPRRQPQHLA 710 VLR QH EI+RRHD G+R LVAA LQP+ R +VGV+DGP RQP+HLA Sbjct: 596 VLRPQHVEIQRRHDAGQRSAGGLVAAHLQPIARGADVVGVVDGPGRQPEHLA 647 >ref|ZP_02379116.1| hypothetical protein BuboB_15400 [Burkholderia ubonensis Bu] Length = 1003 Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust. Identities = 42/107 (39%), Positives = 51/107 (47%), Gaps = 5/107 (4%) Query: 506 HDHHVPAEVAEHGLEL--GPQSLAHHGVERLPVVVDHPPGVAQAVLPALEQRLEDVALVH 563 H HVPA AE +L AH VE L V VDH V + + R E LV Sbjct: 622 HLDHVPAGAAEFRFQLLDDLAVAAHRAVETLQVAVDHEHEVVELLAARHADRAERFRLVR 681 Query: 564 LGVADQRDH-AALRPVVQPAMRLDVVLHQRGKQRLRDAEADRAGGEV 609 L VA++R H AA R ++ A RL V+ R R AEA R G E+ Sbjct: 682 LAVAEERPHLAAFR--LRDAARLQVLHEARLVDRHDRAEAHRHGREL 726