BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0064.p (305 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242965.1| hypothetical protein BBta_7179 [Bradyrhizobi... 349 4e-94 ref|YP_001832159.1| FAD linked oxidase domain-containing protein... 295 6e-78 ref|ZP_03500576.1| putative oxidoreductase protein [Rhizobium et... 285 6e-75 ref|YP_001984784.1| putative oxidoreductase [Rhizobium etli CIAT... 283 2e-74 ref|YP_470909.1| oxidoreductase [Rhizobium etli CFN 42] >gi|8628... 280 2e-73 >ref|YP_001242965.1| hypothetical protein BBta_7179 [Bradyrhizobium sp. BTAi1] gb|ABQ39059.1| hypothetical protein BBta_7179 [Bradyrhizobium sp. BTAi1] Length = 444 Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 174/259 (67%), Positives = 201/259 (77%) Query: 47 VRVAGNLDAAIDQLESSASSTYSVAWIDCLARGAALGRSLLYLAEHATRRDKDMLGPDLE 106 VA +LDAA+ LE +A+ TYSVAWIDCLARG ALGRSL+Y A+HA+ DKD P + Sbjct: 186 THVAEDLDAAMAALERTAAHTYSVAWIDCLARGRALGRSLIYAADHASAADKDRFAPARD 245 Query: 107 TFPRLRTSRLAVPELFPGWLLNRASMRVFNELYFRRGAAHPGKPRLVHWDPYFFPLDAIA 166 FP R + ++P P ++LN ++R FN LYFRRGA P+LVHWDPYFFPLD I Sbjct: 246 AFPPQRRAGPSMPAFMPSFVLNPLAVRGFNALYFRRGARQALTPQLVHWDPYFFPLDTIG 305 Query: 167 DWNRIYGRRGFVQYQCVIPLDRARRVLAEILDRVSRRGDASFLAVLKQLGEGSGPMSFPL 226 WNRIYG RGF+Q+QCVIP ARRVLAEILDRV+RRG ASFLAVLKQLG+ G MSFPL Sbjct: 306 HWNRIYGPRGFLQHQCVIPAANARRVLAEILDRVARRGSASFLAVLKQLGDSHGLMSFPL 365 Query: 227 RGYTLTMDFPVSDALFGFLDQLDALVVDAGGRLYLAKDARQSRATFESGYPGLAALRDIR 286 RGYTL MDFP+ D+LFGFLD+LDA+V AGGRLYLAKDARQSRATF +GY GL LRDIR Sbjct: 366 RGYTLAMDFPIQDSLFGFLDELDAIVTAAGGRLYLAKDARQSRATFAAGYAGLDGLRDIR 425 Query: 287 QQTGANTRLVSHLSARLGI 305 + GA +LVSHLSARLGI Sbjct: 426 RCIGATDKLVSHLSARLGI 444 >ref|YP_001832159.1| FAD linked oxidase domain-containing protein [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB94670.1| FAD linked oxidase domain protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 444 Score = 295 bits (755), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 148/258 (57%), Positives = 181/258 (70%), Gaps = 1/258 (0%) Query: 49 VAGNLDAAIDQLESSASSTYSVAWIDCLARGAALGRSLLYLAEHATRRDKDMLGPDLETF 108 VA NL+ A++ L S +TY AWIDCLA G +LGRSL+YL EHAT D L P F Sbjct: 187 VAKNLETALESLSSHEDATYCAAWIDCLATGKSLGRSLVYLGEHATPEAVDELKPGAPLF 246 Query: 109 PRLRTSRLAVPELFPGWLLNRASMRVFNELYFRRGAAHPGKPRLVHWDPYFFPLDAIADW 168 P + L VP FP + LNR S+ FN LYFR+GA G P L DP FFPLD + DW Sbjct: 247 PTVGHEALGVPLDFPSFALNRLSVTAFNMLYFRKGALMAGVPYLSGIDPSFFPLDGVHDW 306 Query: 169 NRIYGRRGFVQYQCVIPLDRARRVLAEILDRVSRRGDASFLAVLKQLG-EGSGPMSFPLR 227 NRIYG+RGFVQ+Q VIP ++A+ LAEIL R++ RG+ASFLAVLK+ G SG +SFP Sbjct: 307 NRIYGKRGFVQHQSVIPEEKAQSTLAEILRRIANRGNASFLAVLKKFGASSSGILSFPSP 366 Query: 228 GYTLTMDFPVSDALFGFLDQLDALVVDAGGRLYLAKDARQSRATFESGYPGLAALRDIRQ 287 GY+L +DF + LF FLD++D LV+ AGGR+YLAKDARQS ATF +GYPGL R+IR Sbjct: 367 GYSLALDFSIDRGLFEFLDEIDKLVIAAGGRIYLAKDARQSAATFAAGYPGLERFREIRA 426 Query: 288 QTGANTRLVSHLSARLGI 305 + GA+T+L SHLS RLGI Sbjct: 427 KIGADTKLTSHLSERLGI 444 >ref|ZP_03500576.1| putative oxidoreductase protein [Rhizobium etli Kim 5] Length = 349 Score = 285 bits (729), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 144/259 (55%), Positives = 182/259 (70%), Gaps = 5/259 (1%) Query: 49 VAGNLDAAIDQLESSASSTYSVAWIDCLARGAALGRSLLYLAEHATRRDKDMLG--PDLE 106 VA NL A+ L S +TYSVAWIDCL++GA+LGRSL++ EHAT +D +G P + Sbjct: 94 VAENLSEALTALRQSEDATYSVAWIDCLSKGASLGRSLIFAGEHAT---QDQVGETPKAD 150 Query: 107 TFPRLRTSRLAVPELFPGWLLNRASMRVFNELYFRRGAAHPGKPRLVHWDPYFFPLDAIA 166 FP ++ L++P PGWLLN+AS+ FNELYFR G KP LVHWD YFFPLD I Sbjct: 151 RFPSPTSAALSLPLDMPGWLLNKASVSAFNELYFRSGIRKSAKPLLVHWDNYFFPLDRIL 210 Query: 167 DWNRIYGRRGFVQYQCVIPLDRARRVLAEILDRVSRRGDASFLAVLKQLGEGSGPMSFPL 226 WNR+YG+RGF+Q+QCV+P + +VLA ILDR + G SFLAVLK+L +G +SF Sbjct: 211 RWNRLYGKRGFIQHQCVVPDADSLQVLASILDRFAHSGKGSFLAVLKRLRGSAGLLSFAA 270 Query: 227 RGYTLTMDFPVSDALFGFLDQLDALVVDAGGRLYLAKDARQSRATFESGYPGLAALRDIR 286 GYTL +D P + + LD++D LVV AGGRLYLAKDARQSR TFESGYP L A +++R Sbjct: 271 PGYTLALDLPATQDVLRLLDEIDKLVVKAGGRLYLAKDARQSRHTFESGYPKLDAFKELR 330 Query: 287 QQTGANTRLVSHLSARLGI 305 + TGA+ R S L+ RLGI Sbjct: 331 RATGADRRFNSRLAKRLGI 349 >ref|YP_001984784.1| putative oxidoreductase [Rhizobium etli CIAT 652] gb|ACE94234.1| putative oxidoreductase protein [Rhizobium etli CIAT 652] Length = 440 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 143/259 (55%), Positives = 180/259 (69%), Gaps = 5/259 (1%) Query: 49 VAGNLDAAIDQLESSASSTYSVAWIDCLARGAALGRSLLYLAEHATRRDKDMLG--PDLE 106 VA NL A+ L S +TYSV WIDCL++GA+LGRSL++ EHAT +D +G P + Sbjct: 185 VAENLSEALRALRQSEDATYSVGWIDCLSKGASLGRSLIFTGEHAT---QDQVGETPKTD 241 Query: 107 TFPRLRTSRLAVPELFPGWLLNRASMRVFNELYFRRGAAHPGKPRLVHWDPYFFPLDAIA 166 FP + +++P PGWLLN+AS+ FNELYFR G KP LVHWD YFFPLD I Sbjct: 242 RFPSPNNAAISLPLDMPGWLLNKASVSAFNELYFRSGIRRSAKPLLVHWDNYFFPLDRIL 301 Query: 167 DWNRIYGRRGFVQYQCVIPLDRARRVLAEILDRVSRRGDASFLAVLKQLGEGSGPMSFPL 226 WNR+YG+RGF+Q+QCV+P A +VL ILDR + G SFLAVLK+L G+G +SF Sbjct: 302 RWNRLYGKRGFIQHQCVVPDADALQVLTGILDRFAHSGKGSFLAVLKRLRGGAGLLSFAA 361 Query: 227 RGYTLTMDFPVSDALFGFLDQLDALVVDAGGRLYLAKDARQSRATFESGYPGLAALRDIR 286 GYTL +D P + + LD++D LVV AGGRLYLAKDARQSR TFESGYP L A +++R Sbjct: 362 PGYTLALDLPATQDVLRLLDEIDELVVKAGGRLYLAKDARQSRLTFESGYPKLDAFKELR 421 Query: 287 QQTGANTRLVSHLSARLGI 305 + TGA+ R S L+ RLGI Sbjct: 422 RATGADGRFSSRLAKRLGI 440 >ref|YP_470909.1| oxidoreductase [Rhizobium etli CFN 42] gb|ABC92182.1| putative oxidoreductase protein [Rhizobium etli CFN 42] Length = 440 Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 142/266 (53%), Positives = 183/266 (68%), Gaps = 1/266 (0%) Query: 40 SKIIGVPVRVAGNLDAAIDQLESSASSTYSVAWIDCLARGAALGRSLLYLAEHATRRDKD 99 S I VA NL A+ L+ + +TYSVAWID L++G++LGRSL++ EHAT D+ Sbjct: 176 SGWIAQKTMVAENLADALKALQQTEDATYSVAWIDSLSQGSSLGRSLIFAGEHATL-DQA 234 Query: 100 MLGPDLETFPRLRTSRLAVPELFPGWLLNRASMRVFNELYFRRGAAHPGKPRLVHWDPYF 159 PD F ++P P W+L++ S+ FNELYFR G K LVHWD YF Sbjct: 235 GGMPDAGRFAAKHAGSFSLPFDLPQWVLSKTSVAAFNELYFRAGVRKAAKTSLVHWDKYF 294 Query: 160 FPLDAIADWNRIYGRRGFVQYQCVIPLDRARRVLAEILDRVSRRGDASFLAVLKQLGEGS 219 FPLD+I +WNR+YGRRGF+Q+QCV+P + A VL+ IL+R +R G SFLAVLK+LG GS Sbjct: 295 FPLDSILEWNRLYGRRGFLQHQCVVPAEDALAVLSGILERFARSGKGSFLAVLKKLGGGS 354 Query: 220 GPMSFPLRGYTLTMDFPVSDALFGFLDQLDALVVDAGGRLYLAKDARQSRATFESGYPGL 279 G +SFP GYTL +D PV+ +F LD++D LVV AGGRLYLAKDARQSR TFE+GYP L Sbjct: 355 GLLSFPAPGYTLALDLPVTQEVFRLLDEIDELVVKAGGRLYLAKDARQSRHTFEAGYPRL 414 Query: 280 AALRDIRQQTGANTRLVSHLSARLGI 305 AA +++R+ TGA+ S L+ RLGI Sbjct: 415 AAFKELRKVTGADRHFSSRLAKRLGI 440