BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0046.p (198 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001327872.1| TetR family transcriptional regulator [Sinor... 302 2e-80 ref|NP_386386.1| putative transcription regulator protein [Sinor... 301 5e-80 ref|YP_004549594.1| regulatory protein TetR [Sinorhizobium melil... 299 1e-79 ref|YP_002362290.1| TetR family transcriptional regulator [Methy... 285 2e-75 ref|NP_949674.1| TetR family transcriptional regulator [Rhodopse... 284 6e-75 >ref|YP_001327872.1| TetR family transcriptional regulator [Sinorhizobium medicae WSM419] gb|ABR61037.1| transcriptional regulator, TetR family [Sinorhizobium medicae WSM419] Length = 202 Score = 302 bits (773), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 145/190 (76%), Positives = 166/190 (87%) Query: 5 SEPTRERIVQAASALFYNEGIRRVSVDEVAAKAGLTKRTLYYHFKSKDDLVAAYLAARDQ 64 ++ TRERIV AA+ LFY EGIR VSVD VA AGLTKRTLYYHFKSKD+L+AAYL RDQ Sbjct: 4 TQNTRERIVSAAARLFYAEGIRAVSVDAVAEAAGLTKRTLYYHFKSKDELIAAYLEERDQ 63 Query: 65 PNLALFRKWFAEAEGGLAAKVEAIFKNLARSARHPKWKGCGFLRTSAELANMPGHPAIRI 124 PNL LF+KWF+E +G A+K++AIF NLAR+ARHPKWKGCGFLRTSAELANMPGHPAIRI Sbjct: 64 PNLKLFQKWFSETDGDAASKIKAIFLNLARAARHPKWKGCGFLRTSAELANMPGHPAIRI 123 Query: 125 GAAHKKKFEDWLRTAFADEGIADPRRLARQILLLLDGSFAVVLLHRDASYMETAGEAALT 184 AAHK+KFEDWLR +F EGIA+ RLARQ+LLLLDGSFAVVLLHRD SYMETAGEAA T Sbjct: 124 AAAHKRKFEDWLRQSFETEGIAEAARLARQMLLLLDGSFAVVLLHRDPSYMETAGEAAAT 183 Query: 185 LIETALAKPA 194 L++ AL++P+ Sbjct: 184 LVKLALSEPS 193 >ref|NP_386386.1| putative transcription regulator protein [Sinorhizobium meliloti 1021] emb|CAC46859.1| Putative transcription regulator [Sinorhizobium meliloti 1021] gb|AEG05008.1| regulatory protein TetR [Sinorhizobium meliloti BL225C] gb|AEH78255.1| putative transcription regulator protein [Sinorhizobium meliloti SM11] Length = 198 Score = 301 bits (770), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 145/185 (78%), Positives = 161/185 (87%) Query: 8 TRERIVQAASALFYNEGIRRVSVDEVAAKAGLTKRTLYYHFKSKDDLVAAYLAARDQPNL 67 TRERIV AAS LFY EGIR V VD VA AG+TKRTLYYHFKSKDDL+AAYL RDQPNL Sbjct: 7 TRERIVSAASKLFYAEGIRAVGVDAVAEAAGVTKRTLYYHFKSKDDLIAAYLEGRDQPNL 66 Query: 68 ALFRKWFAEAEGGLAAKVEAIFKNLARSARHPKWKGCGFLRTSAELANMPGHPAIRIGAA 127 LF+KWF+EAEGG+A++VE IF NLAR+ARHPKWKGCGFLRTSAELA+MPGHPAIRIGAA Sbjct: 67 KLFQKWFSEAEGGVASRVEGIFFNLARAARHPKWKGCGFLRTSAELASMPGHPAIRIGAA 126 Query: 128 HKKKFEDWLRTAFADEGIADPRRLARQILLLLDGSFAVVLLHRDASYMETAGEAALTLIE 187 HKKKFEDWLR AF EGI + LARQ+LLLLDGSFAVVLLHRD SYMETAG AA +L++ Sbjct: 127 HKKKFEDWLRQAFEAEGIVEAEELARQVLLLLDGSFAVVLLHRDPSYMETAGAAAASLVK 186 Query: 188 TALAK 192 AL++ Sbjct: 187 LALSE 191 >ref|YP_004549594.1| regulatory protein TetR [Sinorhizobium meliloti AK83] gb|AEG53980.1| regulatory protein TetR [Sinorhizobium meliloti AK83] Length = 198 Score = 299 bits (766), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 145/183 (79%), Positives = 159/183 (86%) Query: 8 TRERIVQAASALFYNEGIRRVSVDEVAAKAGLTKRTLYYHFKSKDDLVAAYLAARDQPNL 67 TRERIV AAS LFY EGIR V VD VA AG+TKRTLYYHFKSKDDL+AAYL RDQPNL Sbjct: 7 TRERIVSAASKLFYAEGIRAVGVDAVAEAAGVTKRTLYYHFKSKDDLIAAYLEGRDQPNL 66 Query: 68 ALFRKWFAEAEGGLAAKVEAIFKNLARSARHPKWKGCGFLRTSAELANMPGHPAIRIGAA 127 LF+KWF+EAEGG+A++VE IF NLAR+ARHPKWKGCGFLRTSAELA+MPGHPAIRIGAA Sbjct: 67 KLFQKWFSEAEGGVASRVEGIFFNLARAARHPKWKGCGFLRTSAELASMPGHPAIRIGAA 126 Query: 128 HKKKFEDWLRTAFADEGIADPRRLARQILLLLDGSFAVVLLHRDASYMETAGEAALTLIE 187 HKKKFEDWLR AF EGI + LARQ+LLLLDGSFAVVLLHRD SYMETAG AA +L++ Sbjct: 127 HKKKFEDWLRQAFEAEGIVEAEELARQVLLLLDGSFAVVLLHRDPSYMETAGAAAASLVK 186 Query: 188 TAL 190 AL Sbjct: 187 LAL 189 >ref|YP_002362290.1| TetR family transcriptional regulator [Methylocella silvestris BL2] gb|ACK50928.1| transcriptional regulator, TetR family [Methylocella silvestris BL2] Length = 206 Score = 285 bits (730), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 135/190 (71%), Positives = 157/190 (82%) Query: 1 MPRPSEPTRERIVQAASALFYNEGIRRVSVDEVAAKAGLTKRTLYYHFKSKDDLVAAYLA 60 M + TR+RI+ AAS LFY+EGIR VSVD VA KA +TKRTLYYHF SKD+L+AAYL Sbjct: 13 MASTNPSTRDRIIAAASKLFYSEGIRSVSVDAVAEKAAVTKRTLYYHFSSKDELIAAYLE 72 Query: 61 ARDQPNLALFRKWFAEAEGGLAAKVEAIFKNLARSARHPKWKGCGFLRTSAELANMPGHP 120 ARDQPNLALF++WFAE EGGLA K+ +F+NLA+SARHPKWKGCGFLRT+AELANMPGHP Sbjct: 73 ARDQPNLALFKRWFAETEGGLADKIRGVFRNLAKSARHPKWKGCGFLRTAAELANMPGHP 132 Query: 121 AIRIGAAHKKKFEDWLRTAFADEGIADPRRLARQILLLLDGSFAVVLLHRDASYMETAGE 180 AI++GAAHKK FE+WLR F E IA LARQ++LLLDGSFAVVLLHRD SYME AG+ Sbjct: 133 AIKVGAAHKKGFENWLRLTFEAESIAGAPALARQMVLLLDGSFAVVLLHRDPSYMEAAGD 192 Query: 181 AALTLIETAL 190 AA L+ A+ Sbjct: 193 AAFALVNAAV 202 >ref|NP_949674.1| TetR family transcriptional regulator [Rhodopseudomonas palustris CGA009] emb|CAE29779.1| transcriptional regulator, TetR family [Rhodopseudomonas palustris CGA009] Length = 226 Score = 284 bits (726), Expect = 6e-75, Method: Compositional matrix adjust. Identities = 136/174 (78%), Positives = 149/174 (85%) Query: 4 PSEPTRERIVQAASALFYNEGIRRVSVDEVAAKAGLTKRTLYYHFKSKDDLVAAYLAARD 63 P PTR+RIV AA+ LFY+EGIR V VD VA KAG+TKRTLYYHF+SKDDLVAAYL RD Sbjct: 13 PPSPTRDRIVAAAAKLFYSEGIRAVGVDAVAEKAGVTKRTLYYHFRSKDDLVAAYLEGRD 72 Query: 64 QPNLALFRKWFAEAEGGLAAKVEAIFKNLARSARHPKWKGCGFLRTSAELANMPGHPAIR 123 QPNLALFR+WF E G L AKVE IF+NLAR+ARHPKWKGCGFLRTSAELAN+PGHPAI+ Sbjct: 73 QPNLALFRQWFEETPGELPAKVEGIFRNLARAARHPKWKGCGFLRTSAELANLPGHPAIK 132 Query: 124 IGAAHKKKFEDWLRTAFADEGIADPRRLARQILLLLDGSFAVVLLHRDASYMET 177 IGAAHKKKFE WLR FA+ GI + LARQ+LLLLDGSFAVVLLHRD SYMET Sbjct: 133 IGAAHKKKFERWLRETFAEAGITEADELARQMLLLLDGSFAVVLLHRDPSYMET 186