BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0041.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_571055.1| HAD family hydrolase [Rhodopseudomonas palustri... 259 2e-67 ref|NP_949673.1| HAD-superfamily hydrolase [Rhodopseudomonas pal... 257 8e-67 ref|YP_484907.1| HAD family hydrolase [Rhodopseudomonas palustri... 255 4e-66 ref|YP_001993782.1| HAD family hydrolase [Rhodopseudomonas palus... 252 3e-65 ref|YP_533978.1| HAD family hydrolase [Rhodopseudomonas palustri... 249 2e-64 >ref|YP_571055.1| HAD family hydrolase [Rhodopseudomonas palustris BisB5] gb|ABE41154.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Rhodopseudomonas palustris BisB5] Length = 271 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 131/220 (59%), Positives = 166/220 (75%), Gaps = 1/220 (0%) Query: 5 WTVDAVLLDMDGTLLDTEKVYFDSLVAALNACGYTDDVVALCHSMVGLPGPACEAMLRDH 64 W ++AVLLDMDGTL+DTE+VY DSL AL G D A CH+M+GLPGP C+A+L + Sbjct: 46 WQIEAVLLDMDGTLVDTERVYIDSLTEALTIFGLPD-ARATCHTMIGLPGPECQALLVER 104 Query: 65 YGAAFPLEAVNLAFLDHRDRMMRLGLPLKSGTLDLLDAIAAAQRPMAIVTSSSRRSAERN 124 YG A PL +N AF RD GLPLK+GT +LLD+++ A+ P+A+VTSSSR++A+++ Sbjct: 105 YGDALPLAEINRAFAQRRDARFASGLPLKAGTRELLDSLSEARCPVAVVTSSSRKTADQH 164 Query: 125 LTLAGIRARFDTLLTLDDVAQGKPDPELYLKAAARLGVTPASCIAVEDSNHGVAAAHAAG 184 LTLAGIR RFD +LT DDV GKP P+LYL AA R+G P +C+AVEDS+ GVAAA AG Sbjct: 165 LTLAGIRDRFDIILTHDDVVLGKPAPDLYLLAAQRIGSAPQNCVAVEDSSVGVAAAFTAG 224 Query: 185 AITLMVPDMAPPTDETRAKCAAVLPDLNAVLALLQERGAL 224 AITLMVPD+ P +TR KCAAVLPDL+AVLA +++RG Sbjct: 225 AITLMVPDLLQPDHDTREKCAAVLPDLHAVLATMRQRGQF 264 >ref|NP_949673.1| HAD-superfamily hydrolase [Rhodopseudomonas palustris CGA009] emb|CAE29778.1| putative phosphoglycolate phosphatase [Rhodopseudomonas palustris CGA009] Length = 247 Score = 257 bits (657), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 134/218 (61%), Positives = 162/218 (74%), Gaps = 1/218 (0%) Query: 5 WTVDAVLLDMDGTLLDTEKVYFDSLVAALNACGYTDDVVALCHSMVGLPGPACEAMLRDH 64 W + AVLLDMDGTL+DTE++Y +SL LNA G D + C SMVGLPGP C+A+L Sbjct: 19 WLIAAVLLDMDGTLVDTERLYLESLTEVLNAFGLPD-AIETCESMVGLPGPECQALLVAR 77 Query: 65 YGAAFPLEAVNLAFLDHRDRMMRLGLPLKSGTLDLLDAIAAAQRPMAIVTSSSRRSAERN 124 YG PL +N AF++ RD GLP+K GT +LLDA+ A P+A+VTSSSR++A+ + Sbjct: 78 YGETLPLREINRAFVEKRDARFAQGLPVKPGTCELLDALDDAGCPVAVVTSSSRKTADMH 137 Query: 125 LTLAGIRARFDTLLTLDDVAQGKPDPELYLKAAARLGVTPASCIAVEDSNHGVAAAHAAG 184 LTLAGIRARF T+LT DDV GKP P+LYL AA RLGV PA C+AVEDS+ GVA+A AG Sbjct: 138 LTLAGIRARFATILTRDDVVHGKPAPDLYLLAANRLGVPPAHCVAVEDSSVGVASAFTAG 197 Query: 185 AITLMVPDMAPPTDETRAKCAAVLPDLNAVLALLQERG 222 AITLMVPD+ P D TR KCAAVLPDLNAV +LL+ RG Sbjct: 198 AITLMVPDLLQPDDATRGKCAAVLPDLNAVRSLLEIRG 235 >ref|YP_484907.1| HAD family hydrolase [Rhodopseudomonas palustris HaA2] gb|ABD05996.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Rhodopseudomonas palustris HaA2] Length = 229 Score = 255 bits (651), Expect = 4e-66, Method: Compositional matrix adjust. Identities = 132/218 (60%), Positives = 164/218 (75%), Gaps = 1/218 (0%) Query: 5 WTVDAVLLDMDGTLLDTEKVYFDSLVAALNACGYTDDVVALCHSMVGLPGPACEAMLRDH 64 W ++AVLLDMDGTL+DTE+VY +SL L G D +A CHSM+GLPGP C+A+L Sbjct: 4 WLIEAVLLDMDGTLVDTERVYIESLTEVLAELGLPD-ALATCHSMIGLPGPQCQALLVAR 62 Query: 65 YGAAFPLEAVNLAFLDHRDRMMRLGLPLKSGTLDLLDAIAAAQRPMAIVTSSSRRSAERN 124 YG A PL A+N AF RD GLP+K+GTL+LLD + A+ +A+VTSSSR++A+ + Sbjct: 63 YGDALPLTAINRAFAAKRDARFARGLPVKAGTLELLDTLREARCKVAVVTSSSRKTADLH 122 Query: 125 LTLAGIRARFDTLLTLDDVAQGKPDPELYLKAAARLGVTPASCIAVEDSNHGVAAAHAAG 184 LTLAGIRARFDT+ T DDV +GKP P+LYL AA R+G P +C+AVEDS+ GVAAA AG Sbjct: 123 LTLAGIRARFDTIFTRDDVDRGKPAPDLYLLAAQRIGSAPRNCVAVEDSSVGVAAAFTAG 182 Query: 185 AITLMVPDMAPPTDETRAKCAAVLPDLNAVLALLQERG 222 AITLMVPD+ P TR KCAAVLPDL+AVLA L++RG Sbjct: 183 AITLMVPDLLQPDHGTREKCAAVLPDLHAVLATLRQRG 220 >ref|YP_001993782.1| HAD family hydrolase [Rhodopseudomonas palustris TIE-1] gb|ACF03307.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Rhodopseudomonas palustris TIE-1] Length = 235 Score = 252 bits (644), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 133/220 (60%), Positives = 159/220 (72%), Gaps = 1/220 (0%) Query: 5 WTVDAVLLDMDGTLLDTEKVYFDSLVAALNACGYTDDVVALCHSMVGLPGPACEAMLRDH 64 W + AVLLDMDGTL+DTE++Y +SL LNA G D + C SMVGLPGP C+A+L Sbjct: 7 WLIAAVLLDMDGTLVDTERLYLESLTEVLNAFGLPD-AIETCESMVGLPGPECQALLVAR 65 Query: 65 YGAAFPLEAVNLAFLDHRDRMMRLGLPLKSGTLDLLDAIAAAQRPMAIVTSSSRRSAERN 124 YG PL +N AF++ RD GLP+K GT +LLDA+ A P+A+VTSSSR++A+ + Sbjct: 66 YGETLPLREINRAFVEKRDARFAQGLPVKPGTCELLDALDDAGCPVAVVTSSSRKTADMH 125 Query: 125 LTLAGIRARFDTLLTLDDVAQGKPDPELYLKAAARLGVTPASCIAVEDSNHGVAAAHAAG 184 LTLAGIRARF T+LT DDV GKP P+LYL AA RLGV PA C+AVEDS+ GVA+A AG Sbjct: 126 LTLAGIRARFGTILTRDDVVHGKPAPDLYLLAADRLGVPPAHCVAVEDSSVGVASAFTAG 185 Query: 185 AITLMVPDMAPPTDETRAKCAAVLPDLNAVLALLQERGAL 224 AITLMVPD+ P TR KCAAVLPDLNAV LL RG Sbjct: 186 AITLMVPDLLQPDAATRGKCAAVLPDLNAVRTLLGIRGQF 225 >ref|YP_533978.1| HAD family hydrolase [Rhodopseudomonas palustris BisB18] gb|ABD89659.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Rhodopseudomonas palustris BisB18] Length = 223 Score = 249 bits (636), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 138/224 (61%), Positives = 170/224 (75%), Gaps = 1/224 (0%) Query: 1 VNARWTVDAVLLDMDGTLLDTEKVYFDSLVAALNACGYTDDVVALCHSMVGLPGPACEAM 60 + A W VDAVLLDMDGTL+DTE+VY SL L+ GY D A+C +MVGLPGP C+ + Sbjct: 1 MTADWQVDAVLLDMDGTLVDTERVYITSLTEVLDGFGYPD-AAAVCAAMVGLPGPECQQL 59 Query: 61 LRDHYGAAFPLEAVNLAFLDHRDRMMRLGLPLKSGTLDLLDAIAAAQRPMAIVTSSSRRS 120 L + YGA FPL +N AF + RD M+ GLPLK G ++LLDA+ AA PMA+VTS+S+ + Sbjct: 60 LVERYGADFPLPKINRAFAERRDAMLADGLPLKRGAVELLDALRAADWPMAVVTSASQGT 119 Query: 121 AERNLTLAGIRARFDTLLTLDDVAQGKPDPELYLKAAARLGVTPASCIAVEDSNHGVAAA 180 AE +LTL GIRARF+ ++T DDVA GKP+P+LYL AA RLGVTP +C+AVEDS+ G+AAA Sbjct: 120 AEAHLTLGGIRARFELIVTRDDVAHGKPNPDLYLLAAKRLGVTPRACVAVEDSSVGIAAA 179 Query: 181 HAAGAITLMVPDMAPPTDETRAKCAAVLPDLNAVLALLQERGAL 224 AAGAI LMVPD+ P TR +CAAVLPDLNAVLALL+ R L Sbjct: 180 FAAGAIALMVPDLQQPNAATRGQCAAVLPDLNAVLALLRTRAGL 223