BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0040.p (285 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774065.1| hypothetical protein bll7425 [Bradyrhizobium ja... 363 2e-98 ref|YP_001237906.1| hypothetical protein BBta_1793 [Bradyrhizobi... 325 5e-87 ref|YP_001207853.1| hypothetical protein BRADO5982 [Bradyrhizobi... 322 4e-86 ref|ZP_08627131.1| hypothetical protein CSIRO_0188 [Bradyrhizobi... 307 1e-81 ref|ZP_07027474.1| Protein of unknown function DUF1800 [Afipia s... 253 2e-65 >ref|NP_774065.1| hypothetical protein bll7425 [Bradyrhizobium japonicum USDA 110] dbj|BAC52690.1| bll7425 [Bradyrhizobium japonicum USDA 110] Length = 548 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 200/274 (72%), Positives = 216/274 (78%), Gaps = 14/274 (5%) Query: 7 MARDSQAALVALNRFGFGARGGASGDFINAASDPRGFVLAELARPNGALLEVPGLLSTPE 66 MARDSQAALVALNRFG GARGGASGD INAASDPRGFV AELARPNG LLE PGL STP+ Sbjct: 29 MARDSQAALVALNRFGLGARGGASGDLINAASDPRGFVKAELARPNGVLLEAPGLQSTPQ 88 Query: 67 LGKQVFDYQFEIQQARNAAKQGASETPPQGP------DAKPQPRRNLSLPTAAKEIAGKD 120 LG+ VF YQ E++QAR AA + TPP+ P D KP PRRNLSL TAA EIAG+ Sbjct: 89 LGQAVFAYQDEVKQAREAAAKAG--TPPEAPPLQAPADQKPGPRRNLSLNTAATEIAGQM 146 Query: 121 SAMQAPDNANAAMTPSAPMQPPTIQPLAGPPKPPAQPLNIIQKTFRAEALARLQRGVVAD 180 + + D A T MQP P A KP QPLN+IQKTFRAEALARLQR + + Sbjct: 147 AEAKPADAAAKPET----MQPNMAAPPA--AKPAPQPLNVIQKTFRAEALARLQRATLVE 200 Query: 181 CGFVERLVVFWSNHFCISANKGALARMWAGSFEREAIRPHVLGRFPDMLKAVEQHPAMLF 240 CGF ERLVVFWSNHFCISA+KG LAR+WAG+FEREAIRPHVLGRF DMLKAVEQHPAMLF Sbjct: 201 CGFTERLVVFWSNHFCISASKGELARIWAGAFEREAIRPHVLGRFADMLKAVEQHPAMLF 260 Query: 241 FLDNQQSLGPESRAGINRNRGLNENLAREIMELH 274 FLDNQQSLGP+SRAG NR RGLNENLAREIMELH Sbjct: 261 FLDNQQSLGPDSRAGQNRKRGLNENLAREIMELH 294 >ref|YP_001237906.1| hypothetical protein BBta_1793 [Bradyrhizobium sp. BTAi1] gb|ABQ34000.1| hypothetical protein BBta_1793 [Bradyrhizobium sp. BTAi1] Length = 511 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 178/278 (64%), Positives = 200/278 (71%), Gaps = 31/278 (11%) Query: 7 MARDSQAALVALNRFGFGARGGASGDFINAASDPRGFVLAELARPNGALLEVPGLLSTPE 66 MARD Q AL+ALNRFGFGARGGASGD +NAASDPRGFV AELARPNGALLE+PGL +TP Sbjct: 1 MARDPQGALIALNRFGFGARGGASGDLMNAASDPRGFVKAELARPNGALLELPGLQATPV 60 Query: 67 LGKQVFDYQFEIQQARNAAKQGASETPPQGPDAKPQPRRNLSLPTAAKEIAGKDSAMQAP 126 L + VF YQ E+++AR AA + S+ P+ P P G D M +P Sbjct: 61 LAEAVFAYQDEVKRAREAAAK--SDASPEQPGQTRNP-----------PATGADLPMASP 107 Query: 127 DNANAAMTPSAPMQPPTIQPLAGPPKPPAQPLN----------IIQKTFRAEALARLQRG 176 +P+AP Q ++ P AG P Q + ++QKTFRAEALARLQR Sbjct: 108 -------SPAAP-QAASLSPQAGEAAPAMQAVQAKPQPQQPPNVVQKTFRAEALARLQRA 159 Query: 177 VVADCGFVERLVVFWSNHFCISANKGALARMWAGSFEREAIRPHVLGRFPDMLKAVEQHP 236 V+ADCG ERLV FWSNHFCISA KG LARMWAG+FEREAIRPHVLGRF DMLKAVEQHP Sbjct: 160 VLADCGVTERLVAFWSNHFCISAGKGELARMWAGAFEREAIRPHVLGRFADMLKAVEQHP 219 Query: 237 AMLFFLDNQQSLGPESRAGINRNRGLNENLAREIMELH 274 AMLFFLDNQ+SLGPESRAG NR RGLNENLAREIMELH Sbjct: 220 AMLFFLDNQESLGPESRAGQNRKRGLNENLAREIMELH 257 >ref|YP_001207853.1| hypothetical protein BRADO5982 [Bradyrhizobium sp. ORS 278] emb|CAL79638.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 504 Score = 322 bits (825), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 178/269 (66%), Positives = 196/269 (72%), Gaps = 20/269 (7%) Query: 7 MARDSQAALVALNRFGFGARGGASGDFINAASDPRGFVLAELARPNGALLEVPGLLSTPE 66 MARD +AALVALNRFGFGARGGASGD +NAA+DPRGFV AELARP GALLEVPGL TP Sbjct: 1 MARDPKAALVALNRFGFGARGGASGDLVNAAADPRGFVKAELARPTGALLEVPGLQGTPA 60 Query: 67 LGKQVFDYQFEIQQARNAAKQGASETPPQGPDAKPQPRRNLSLPTAAKEIAGKDSAMQAP 126 L VF YQ E+++AR AA + P G R LS+ G D M AP Sbjct: 61 LADAVFAYQDEVKRAREAAAKAEPPPEPPGQT------RGLSM-------NGADPQMAAP 107 Query: 127 -DNANAAMTPSAPMQPPTIQPLAGPPKPPAQPLNIIQKTFRAEALARLQRGVVADCGFVE 185 N A T P +Q + P P QP N++QKTFRAEALAR+QR V+ADCG E Sbjct: 108 PANGTTAATE------PAMQAVPTKPAQPQQPPNVVQKTFRAEALARVQRAVLADCGVTE 161 Query: 186 RLVVFWSNHFCISANKGALARMWAGSFEREAIRPHVLGRFPDMLKAVEQHPAMLFFLDNQ 245 RLV FWSNHFCISA KG LARMWAG+FEREAIRPHVLGRF DMLKAVEQHPAMLFFLDNQ Sbjct: 162 RLVAFWSNHFCISAGKGELARMWAGAFEREAIRPHVLGRFADMLKAVEQHPAMLFFLDNQ 221 Query: 246 QSLGPESRAGINRNRGLNENLAREIMELH 274 +SLGP+SRAG +R RGLNENLAREIMELH Sbjct: 222 ESLGPDSRAGQSRKRGLNENLAREIMELH 250 >ref|ZP_08627131.1| hypothetical protein CSIRO_0188 [Bradyrhizobiaceae bacterium SG-6C] gb|EGP10165.1| hypothetical protein CSIRO_0188 [Bradyrhizobiaceae bacterium SG-6C] Length = 495 Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 170/268 (63%), Positives = 195/268 (72%), Gaps = 27/268 (10%) Query: 7 MARDSQAALVALNRFGFGARGGASGDFINAASDPRGFVLAELARPNGALLEVPGLLSTPE 66 MARD Q ALVALNRFG GARGGA+ D +AASDPRGFV AEL RPN ALL+ PGLL +P Sbjct: 1 MARDPQGALVALNRFGLGARGGAASDLSSAASDPRGFVKAELGRPNAALLDAPGLLPSPA 60 Query: 67 LGKQVFDYQFEIQQARNAAKQGASETPPQGPDAKPQPRRNLSLPTAAKEIAGKDSAMQAP 126 L + VFDYQ +++Q R AAK A+ + A +P TA +E DS +A Sbjct: 61 LAQMVFDYQKDVKQQREAAKTDAAMS-----SAADKPAEM----TAMRETMQGDSKTEA- 110 Query: 127 DNANAAMTPSAPMQPPTIQPLAGPPKPPAQPLNIIQKTFRAEALARLQRGVVADCGFVER 186 M P T QP K P +PLN+IQKTFRAEALARLQR +A+CGFVER Sbjct: 111 ------------MLPKTAQP-----KEPPKPLNVIQKTFRAEALARLQRATMAECGFVER 153 Query: 187 LVVFWSNHFCISANKGALARMWAGSFEREAIRPHVLGRFPDMLKAVEQHPAMLFFLDNQQ 246 LVVFWSNHFC SA+KGALAR+W+G+FEREAIRPHVLG F D+L+AVEQHPAMLFFLDNQ+ Sbjct: 154 LVVFWSNHFCTSASKGALARIWSGAFEREAIRPHVLGHFGDILRAVEQHPAMLFFLDNQR 213 Query: 247 SLGPESRAGINRNRGLNENLAREIMELH 274 S GP+SRAG NR RGLNENLAREIMELH Sbjct: 214 SFGPQSRAGQNRKRGLNENLAREIMELH 241 >ref|ZP_07027474.1| Protein of unknown function DUF1800 [Afipia sp. 1NLS2] gb|EFI51230.1| Protein of unknown function DUF1800 [Afipia sp. 1NLS2] Length = 467 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 151/268 (56%), Positives = 171/268 (63%), Gaps = 55/268 (20%) Query: 7 MARDSQAALVALNRFGFGARGGASGDFINAASDPRGFVLAELARPNGALLEVPGLLSTPE 66 MARD QAALVALNRFG GARGG +GDF +AASDPR FV AEL R N ALL+VPGL +TP Sbjct: 1 MARDPQAALVALNRFGLGARGGGAGDFASAASDPRDFVKAELGRRNIALLDVPGLQATPA 60 Query: 67 LGKQVFDYQFEIQQARNAAKQGASETPPQGPDAKPQPRRNLSLPTAAKEIAGKDSAMQAP 126 L + F+ Q ++ A++ D KP Sbjct: 61 LAQ----VAFDYQAEVKQQRKAAAQALAMASDGKP------------------------- 91 Query: 127 DNANAAMTPSAPMQPPTIQPLAGPPKPPAQPLNIIQKTFRAEALARLQRGVVADCGFVER 186 +P Q P N+IQ+TFRAEALAR+QR +A+ G VER Sbjct: 92 ----------SPRQSP----------------NVIQQTFRAEALARVQRATMAESGIVER 125 Query: 187 LVVFWSNHFCISANKGALARMWAGSFEREAIRPHVLGRFPDMLKAVEQHPAMLFFLDNQQ 246 LV FWSNHFCISANKG LAR+WAGSFEREAIRPHVLGRF DML AVEQHPAMLF+LDNQQ Sbjct: 126 LVAFWSNHFCISANKGQLARIWAGSFEREAIRPHVLGRFSDMLLAVEQHPAMLFYLDNQQ 185 Query: 247 SLGPESRAGINRNRGLNENLAREIMELH 274 S+GP SRAG NR RGLNENLARE+MELH Sbjct: 186 SVGPNSRAGRNRKRGLNENLAREMMELH 213