BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0082.0033.p         (117 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_578459.1| hypothetical protein Nham_3265 [Nitrobacter ham...   197   3e-49
ref|YP_484911.1| hypothetical protein RPB_1290 [Rhodopseudomonas...   193   6e-48
ref|YP_319240.1| hypothetical protein Nwi_2635 [Nitrobacter wino...   192   1e-47
ref|ZP_07027477.1| protein of unknown function DUF486 [Afipia sp...   191   3e-47
ref|ZP_01045279.1| hypothetical protein NB311A_15107 [Nitrobacte...   187   3e-46

>ref|YP_578459.1| hypothetical protein Nham_3265 [Nitrobacter hamburgensis X14]
 gb|ABE63999.1| protein of unknown function DUF486 [Nitrobacter hamburgensis X14]
          Length = 124

 Score =  197 bits (502), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 100/118 (84%), Positives = 105/118 (88%), Gaps = 1/118 (0%)

Query: 1   MPAISPS-LLPILMLFASNVFMTFAWYGHLKFKGHSLPIVIMVSWGIAFFEYWLAVPANR 59
           MP   PS +LPILMLF SNVFMTFAWYGHLKFK   LP+VI +SWGIAFFEYWLAVPANR
Sbjct: 7   MPVTIPSSVLPILMLFCSNVFMTFAWYGHLKFKESPLPLVIAISWGIAFFEYWLAVPANR 66

Query: 60  WGSAVYSAAQLKTMQEVITLVVFAAFSVLYLKEPLGWNHALGFAFIAAGAFLIFHKWG 117
           WGSAVYSAAQLKT+QEVITLVVFA FSVLYLK+PLGWNHALGFAFIA GAF IFHKW 
Sbjct: 67  WGSAVYSAAQLKTIQEVITLVVFAGFSVLYLKQPLGWNHALGFAFIALGAFFIFHKWS 124


>ref|YP_484911.1| hypothetical protein RPB_1290 [Rhodopseudomonas palustris HaA2]
 gb|ABD06000.1| Protein of unknown function DUF486 [Rhodopseudomonas palustris
           HaA2]
          Length = 119

 Score =  193 bits (491), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 96/113 (84%), Positives = 102/113 (90%)

Query: 4   ISPSLLPILMLFASNVFMTFAWYGHLKFKGHSLPIVIMVSWGIAFFEYWLAVPANRWGSA 63
           ISP +LPIL+L  SN+FMTFAWYGHLK K  +LP+VIMVSWGIA FEYWLAVPANRWGSA
Sbjct: 6   ISPYVLPILLLIGSNIFMTFAWYGHLKHKAVALPVVIMVSWGIALFEYWLAVPANRWGSA 65

Query: 64  VYSAAQLKTMQEVITLVVFAAFSVLYLKEPLGWNHALGFAFIAAGAFLIFHKW 116
           VYSAAQLKTMQEVITLVVFA FS LYLKEPLGWNHALGFAFIA GA+ IFHKW
Sbjct: 66  VYSAAQLKTMQEVITLVVFAGFSALYLKEPLGWNHALGFAFIALGAYFIFHKW 118


>ref|YP_319240.1| hypothetical protein Nwi_2635 [Nitrobacter winogradskyi Nb-255]
 gb|ABA05888.1| Protein of unknown function DUF486 [Nitrobacter winogradskyi
           Nb-255]
          Length = 117

 Score =  192 bits (488), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 96/117 (82%), Positives = 104/117 (88%), Gaps = 1/117 (0%)

Query: 1   MPAISPS-LLPILMLFASNVFMTFAWYGHLKFKGHSLPIVIMVSWGIAFFEYWLAVPANR 59
           MP   PS LLPILMLF SNVFMTFAWYGHLKFK   LP++++ SWGIAFFEYWLAVPANR
Sbjct: 1   MPIAIPSWLLPILMLFCSNVFMTFAWYGHLKFKESPLPLIVLASWGIAFFEYWLAVPANR 60

Query: 60  WGSAVYSAAQLKTMQEVITLVVFAAFSVLYLKEPLGWNHALGFAFIAAGAFLIFHKW 116
           WGSAVYSAA+LKT+QEVITLVVFA FSVLYLK+PLGWNH LGFAF+A GAF IFHKW
Sbjct: 61  WGSAVYSAAELKTIQEVITLVVFAGFSVLYLKQPLGWNHGLGFAFVALGAFFIFHKW 117


>ref|ZP_07027477.1| protein of unknown function DUF486 [Afipia sp. 1NLS2]
 gb|EFI51233.1| protein of unknown function DUF486 [Afipia sp. 1NLS2]
          Length = 116

 Score =  191 bits (485), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 93/115 (80%), Positives = 101/115 (87%)

Query: 1   MPAISPSLLPILMLFASNVFMTFAWYGHLKFKGHSLPIVIMVSWGIAFFEYWLAVPANRW 60
           MP ISP++LPILMLFASN FMTFAWYGHL+FK   L +VIMVSWGIA FEYWLAVPANRW
Sbjct: 1   MPTISPAILPILMLFASNCFMTFAWYGHLRFKESPLVLVIMVSWGIALFEYWLAVPANRW 60

Query: 61  GSAVYSAAQLKTMQEVITLVVFAAFSVLYLKEPLGWNHALGFAFIAAGAFLIFHK 115
           GSAVY+ AQLKT+QEVITL+VFA FS  YLKEPLGWN A+GFAFIA GAF IFHK
Sbjct: 61  GSAVYTPAQLKTIQEVITLIVFAGFSAFYLKEPLGWNQAVGFAFIAVGAFFIFHK 115


>ref|ZP_01045279.1| hypothetical protein NB311A_15107 [Nitrobacter sp. Nb-311A]
 gb|EAQ36607.1| hypothetical protein NB311A_15107 [Nitrobacter sp. Nb-311A]
          Length = 117

 Score =  187 bits (476), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 95/117 (81%), Positives = 102/117 (87%), Gaps = 1/117 (0%)

Query: 1   MP-AISPSLLPILMLFASNVFMTFAWYGHLKFKGHSLPIVIMVSWGIAFFEYWLAVPANR 59
           MP  IS  LLPILMLF SNVFMTFAWYGHLKFK   LP +++ SW IAFFEYWLAVPANR
Sbjct: 1   MPLTISSWLLPILMLFCSNVFMTFAWYGHLKFKESPLPPIVLASWSIAFFEYWLAVPANR 60

Query: 60  WGSAVYSAAQLKTMQEVITLVVFAAFSVLYLKEPLGWNHALGFAFIAAGAFLIFHKW 116
           WGSAVYSAA+LKT+QEVITLVVFA FSVLYLK+PLGWNH LGFAF+A GAF IFHKW
Sbjct: 61  WGSAVYSAAELKTIQEVITLVVFAGFSVLYLKQPLGWNHGLGFAFVALGAFFIFHKW 117