BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0026.p (173 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_783080.1| hypothetical protein RPE_4175 [Rhodopseudomonas... 212 2e-53 ref|YP_533966.1| hypothetical protein RPC_4121 [Rhodopseudomonas... 199 9e-50 ref|YP_002290141.1| hypothetical protein OCAR_7172 [Oligotropha ... 187 6e-46 ref|YP_004110826.1| hypothetical protein Rpdx1_4543 [Rhodopseudo... 186 1e-45 ref|YP_001993773.1| hypothetical protein Rpal_4808 [Rhodopseudom... 186 2e-45 >ref|YP_783080.1| hypothetical protein RPE_4175 [Rhodopseudomonas palustris BisA53] gb|ABJ08100.1| protein of unknown function DUF992 [Rhodopseudomonas palustris BisA53] Length = 171 Score = 212 bits (539), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 111/172 (64%), Positives = 129/172 (75%), Gaps = 2/172 (1%) Query: 1 MRLSTLT-LAALALLAPFATANAAPQVQAGVLQCQGGENVGFVVGSVARLECVFQSGGRR 59 MR S L +AAL+L+A FATANA ++Q GVL+C GG+NVG+VVGS +L CVFQS GRR Sbjct: 1 MRFSRLFGIAALSLVASFATANAQQRLQVGVLECTGGQNVGYVVGSTTQLNCVFQSQGRR 60 Query: 60 PEPYVATVKRIGVDLGVTATTQLAWAVSAPTTQLPRGALAGSYGGVGVNASVGLGAGGNF 119 PEPYVATV+RIG+DLG T T AWAV APT ++ RG LAGSYGGVG NASVGLG GGN Sbjct: 61 PEPYVATVQRIGLDLGFTQDTGFAWAVYAPTQRIGRGDLAGSYGGVGANASVGLGFGGNL 120 Query: 120 LFGGPNNAYALQPISVQGQTGLNVAAGIAGIDLEPVRYNGPRRHHRHHRHHH 171 L GG NA++LQP+S QGQTGLNV AGIA + L P RRH R HR + Sbjct: 121 LAGGSANAFSLQPLSFQGQTGLNVTAGIADLQLRPADLR-QRRHVRKHRRNR 171 >ref|YP_533966.1| hypothetical protein RPC_4121 [Rhodopseudomonas palustris BisB18] gb|ABD89647.1| protein of unknown function DUF992 [Rhodopseudomonas palustris BisB18] Length = 173 Score = 199 bits (507), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 104/162 (64%), Positives = 125/162 (77%), Gaps = 2/162 (1%) Query: 1 MRLSTLT-LAALALLAPFATANAAP-QVQAGVLQCQGGENVGFVVGSVARLECVFQSGGR 58 MRLS+L +AAL+L+A ATANA Q+Q GVL+C GG+NVGFVVGSV L+C F++ GR Sbjct: 1 MRLSSLFGIAALSLVASVATANAQQRQLQVGVLECSGGQNVGFVVGSVTDLQCAFRADGR 60 Query: 59 RPEPYVATVKRIGVDLGVTATTQLAWAVSAPTTQLPRGALAGSYGGVGVNASVGLGAGGN 118 RPEPYVAT+ R G+DLG T T AWAV APT ++ RG LAGSYGGVG NASVG+G GGN Sbjct: 61 RPEPYVATIHRFGLDLGFTQDTGFAWAVYAPTDRIGRGDLAGSYGGVGANASVGVGFGGN 120 Query: 119 FLFGGPNNAYALQPISVQGQTGLNVAAGIAGIDLEPVRYNGP 160 L GG +NAY+LQP+S+QGQTGLNV AG+A + L P GP Sbjct: 121 LLVGGSSNAYSLQPLSLQGQTGLNVTAGVADLQLRPADLRGP 162 >ref|YP_002290141.1| hypothetical protein OCAR_7172 [Oligotropha carboxidovorans OM5] ref|YP_004631900.1| hypothetical protein OCA5_c09370 [Oligotropha carboxidovorans OM5] gb|ACI94276.1| protein of unknown function [Oligotropha carboxidovorans OM5] gb|AEI02083.1| hypothetical protein OCA4_c09360 [Oligotropha carboxidovorans OM4] gb|AEI05659.1| hypothetical protein OCA5_c09370 [Oligotropha carboxidovorans OM5] Length = 173 Score = 187 bits (474), Expect = 6e-46, Method: Compositional matrix adjust. Identities = 98/173 (56%), Positives = 124/173 (71%), Gaps = 5/173 (2%) Query: 1 MRLSTLTLAALAL-LAPFATANAAPQVQAGVLQCQGGENVGFVVGSVARLECVFQSGGRR 59 MR S + AA A+ LA FATANA +VQ GVL C GG +VG ++ SV L+CVF+S GRR Sbjct: 1 MRFSYIVGAASAIFLASFATANAQQRVQVGVLHCHGGPSVGQILSSVTELDCVFESRGRR 60 Query: 60 PEPYVATVKRIGVDLGVTATTQLAWAVSAPTTQLPRGALAGSYGGVGVNASVGLGAGGNF 119 PE YVATV+R GV+LG T TQL W V APT ++ G L+G YGGVG N ++G+G G NF Sbjct: 61 PEGYVATVRRFGVELGATRETQLGWRVHAPTVKVGPGDLSGRYGGVGGNVAIGVGGGSNF 120 Query: 120 LFGGPNNAYALQPISVQGQTGLNVAAGIAGIDLEPVRY--NGP--RRHHRHHR 168 L GG N++ALQP+S+QGQTGLNV+ G+ ++L PV Y GP ++H RHHR Sbjct: 121 LIGGSENSFALQPLSLQGQTGLNVSGGVVSLELRPVGYVQRGPVKKKHKRHHR 173 >ref|YP_004110826.1| hypothetical protein Rpdx1_4543 [Rhodopseudomonas palustris DX-1] gb|ADU46093.1| protein of unknown function DUF992 [Rhodopseudomonas palustris DX-1] Length = 173 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 94/152 (61%), Positives = 114/152 (75%) Query: 3 LSTLTLAALALLAPFATANAAPQVQAGVLQCQGGENVGFVVGSVARLECVFQSGGRRPEP 62 L +AA+AL+A A+A+A +VQ GV++C GG NVG+VVGS +LEC+F+SG RRPEP Sbjct: 4 LRQFGIAAVALIASVASASAQERVQVGVIECAGGPNVGYVVGSSTQLECLFKSGDRRPEP 63 Query: 63 YVATVKRIGVDLGVTATTQLAWAVSAPTTQLPRGALAGSYGGVGVNASVGLGAGGNFLFG 122 Y+A V+RIGVDLG T T LAWAV APT ++ RG L GSYGGVG NAS G G GGN L G Sbjct: 64 YLANVQRIGVDLGFTQNTGLAWAVYAPTRRIGRGDLGGSYGGVGANASFGFGFGGNLLVG 123 Query: 123 GPNNAYALQPISVQGQTGLNVAAGIAGIDLEP 154 G NNA+ALQP+S+QGQTG N AGI + L P Sbjct: 124 GSNNAFALQPLSLQGQTGFNATAGIVDVQLLP 155 >ref|YP_001993773.1| hypothetical protein Rpal_4808 [Rhodopseudomonas palustris TIE-1] gb|ACF03298.1| protein of unknown function DUF992 [Rhodopseudomonas palustris TIE-1] Length = 171 Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 94/152 (61%), Positives = 115/152 (75%) Query: 3 LSTLTLAALALLAPFATANAAPQVQAGVLQCQGGENVGFVVGSVARLECVFQSGGRRPEP 62 L +AA+AL+A A+A+A +VQ GV++C GG NVG+VVGS +LEC+F++ GRRPEP Sbjct: 4 LRQFGIAAVALIASVASASAQQRVQVGVIECAGGPNVGYVVGSTTQLECLFRADGRRPEP 63 Query: 63 YVATVKRIGVDLGVTATTQLAWAVSAPTTQLPRGALAGSYGGVGVNASVGLGAGGNFLFG 122 Y+A V+RIGVDLG T T LAWAV APT ++ RG L GSYGGVG NAS G G GGN L G Sbjct: 64 YIAHVQRIGVDLGFTQNTGLAWAVYAPTQRVGRGDLGGSYGGVGANASFGFGVGGNLLIG 123 Query: 123 GPNNAYALQPISVQGQTGLNVAAGIAGIDLEP 154 G NNA+ALQP+S+QGQTGLN AGI + L P Sbjct: 124 GSNNAFALQPLSLQGQTGLNATAGIVDVQLLP 155