BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0021.p (213 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207833.1| hypothetical protein BRADO5962 [Bradyrhizobi... 216 3e-54 ref|YP_002781309.1| hypothetical protein ROP_41170 [Rhodococcus ... 182 3e-44 ref|YP_001684166.1| hypothetical protein Caul_2541 [Caulobacter ... 179 3e-43 ref|YP_704139.1| hypothetical protein RHA1_ro04188 [Rhodococcus ... 157 7e-37 ref|YP_003593356.1| hypothetical protein Cseg_2276 [Caulobacter ... 154 1e-35 >ref|YP_001207833.1| hypothetical protein BRADO5962 [Bradyrhizobium sp. ORS 278] emb|CAL79618.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 213 Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 135/213 (63%), Positives = 154/213 (72%), Gaps = 1/213 (0%) Query: 1 MLESRRKLALACALSALAGYVDGIGYLHLGGLFVSFMSGNSTRLGVTLAEGHWQHALEAL 60 ML+SRR + LACALSALAGY+DGIG+LHLGGLFVSFMSGNSTR+GV+LAEG W A AL Sbjct: 1 MLDSRRNILLACALSALAGYIDGIGFLHLGGLFVSFMSGNSTRMGVSLAEGRWSEASSAL 60 Query: 61 ALIVLFVAGAAAGSLIVLSALAHRQPLLLLFEAWLLTAAAVAYAYGLPSAAVAAIVLAMG 120 LI LFV GAA GSLI+ H Q LLL+ E LL AA + + +P AVAAIVLAMG Sbjct: 61 GLIGLFVGGAAVGSLIMQRRNRHVQSLLLMVEGALLIAATLCHLATVPFGAVAAIVLAMG 120 Query: 121 LENAVFQLEGGAGLGLTYVTGALVKAGQLIAAALTGGAGWAWLPNLLLWAALVAGALAGA 180 LENA FQ++G GLGLTYVTGALVK GQ +A AL GG WL NLLLWAALVAG++AGA Sbjct: 121 LENAAFQIKGSGGLGLTYVTGALVKVGQAVAVALAGGPRLGWLSNLLLWAALVAGSVAGA 180 Query: 181 MAYGWINLAAIWFAAAAAFALSALVAATAKRTD 213 AY + L A+W A L A VAA A + Sbjct: 181 FAYLHLGLIAVWAGGCVAL-LIAFVAAVAADPE 212 >ref|YP_002781309.1| hypothetical protein ROP_41170 [Rhodococcus opacus B4] dbj|BAH52364.1| hypothetical membrane protein [Rhodococcus opacus B4] Length = 227 Score = 182 bits (462), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 111/212 (52%), Positives = 140/212 (66%), Gaps = 3/212 (1%) Query: 3 ESRRKLALACALSALAGYVDGIGYLHLGGLFVSFMSGNSTRLGVTLAEGHWQHALEALAL 62 +SRR LALA LSALAGYVD +G++ LGG FV+FMSGN TR V A+G W AL A A+ Sbjct: 8 DSRRMLALAVVLSALAGYVDALGFITLGGFFVAFMSGNLTRFSVDFADGTWAPALTAAAV 67 Query: 63 IVLFVAGAAAGSLIVLSALAHRQP---LLLLFEAWLLTAAAVAYAYGLPSAAVAAIVLAM 119 I FV G A G+++V + R P +L + LL A AVA +G + AV A++LAM Sbjct: 68 IGTFVLGCALGAVVVHLSDRTRLPARTTVLAVVSGLLIAGAVAATFGASTVAVGAMLLAM 127 Query: 120 GLENAVFQLEGGAGLGLTYVTGALVKAGQLIAAALTGGAGWAWLPNLLLWAALVAGALAG 179 G EN+ FQ +G +GLTY+TGALVK G +AAAL GG WAWL +L LWA LV GA+ G Sbjct: 128 GAENSFFQKDGEVTIGLTYMTGALVKMGHRLAAALFGGPRWAWLRHLALWAGLVTGAVTG 187 Query: 180 AMAYGWINLAAIWFAAAAAFALSALVAATAKR 211 A+A+ WI L A+WFAAA + AL+ V R Sbjct: 188 ALAHRWIGLDALWFAAALSAALTVTVHLRIDR 219 >ref|YP_001684166.1| hypothetical protein Caul_2541 [Caulobacter sp. K31] gb|ABZ71668.1| protein of unknown function DUF1275 [Caulobacter sp. K31] Length = 214 Score = 179 bits (453), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 113/208 (54%), Positives = 133/208 (63%) Query: 4 SRRKLALACALSALAGYVDGIGYLHLGGLFVSFMSGNSTRLGVTLAEGHWQHALEALALI 63 RR +ALA LSA+AGYVD IG+L LGG FVSFMSGNSTRLGV +A G W+ + L+ Sbjct: 5 RRRDVALAAGLSAVAGYVDAIGFLKLGGFFVSFMSGNSTRLGVGVATGRWETVRTVVILV 64 Query: 64 VLFVAGAAAGSLIVLSALAHRQPLLLLFEAWLLTAAAVAYAYGLPSAAVAAIVLAMGLEN 123 LFVAG AG+L+ R+ +L EA LL A G +A + AIVLAMG EN Sbjct: 65 GLFVAGVVAGALVARRVGEGRRSAVLTLEAALLALGAGLITAGFDTAGIGAIVLAMGAEN 124 Query: 124 AVFQLEGGAGLGLTYVTGALVKAGQLIAAALTGGAGWAWLPNLLLWAALVAGALAGAMAY 183 AVFQ +G G+GLTY+TGALVKAGQ IAAALTGG WAW P LLWA L G GA AY Sbjct: 125 AVFQRDGDVGVGLTYMTGALVKAGQRIAAALTGGDRWAWGPYALLWAGLTLGGALGAAAY 184 Query: 184 GWINLAAIWFAAAAAFALSALVAATAKR 211 +AA+W AA L+A A +R Sbjct: 185 LRFGVAALWAAAGVVATLAAFKAWRERR 212 >ref|YP_704139.1| hypothetical protein RHA1_ro04188 [Rhodococcus jostii RHA1] gb|ABG95981.1| possible membrane protein [Rhodococcus jostii RHA1] Length = 227 Score = 157 bits (398), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 3/212 (1%) Query: 3 ESRRKLALACALSALAGYVDGIGYLHLGGLFVSFMSGNSTRLGVTLAEGHWQHALEALAL 62 +SR+ LALA LS LAGYVD +G++ LGG FV+FMSGN TR V A+ W HA A A+ Sbjct: 8 DSRQMLALAVVLSTLAGYVDALGFITLGGFFVAFMSGNLTRFSVGFADAAWAHAATAAAV 67 Query: 63 IVLFVAGAAAGSLIVLSALAHRQPL---LLLFEAWLLTAAAVAYAYGLPSAAVAAIVLAM 119 I +FV G A G+++V + R P+ +L + LL AVA G + AV A++LAM Sbjct: 68 IGMFVLGCALGAVVVHLSDRRRLPVRTTVLAVVSGLLIVGAVAATVGASTVAVGAMLLAM 127 Query: 120 GLENAVFQLEGGAGLGLTYVTGALVKAGQLIAAALTGGAGWAWLPNLLLWAALVAGALAG 179 G EN+ FQ +G +GLTY+TGALVK G +A AL GG WAWL + LWA LV GA+ G Sbjct: 128 GAENSFFQRDGEVTIGLTYMTGALVKMGHRLAGALFGGPRWAWLRHFALWAGLVVGAVTG 187 Query: 180 AMAYGWINLAAIWFAAAAAFALSALVAATAKR 211 A+A+ WI L A+WFAA + AL+ V R Sbjct: 188 ALAHHWIGLDALWFAAVLSAALTVTVHLRIDR 219 >ref|YP_003593356.1| hypothetical protein Cseg_2276 [Caulobacter segnis ATCC 21756] gb|ADG10738.1| protein of unknown function DUF1275 [Caulobacter segnis ATCC 21756] Length = 213 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/192 (50%), Positives = 119/192 (61%) Query: 5 RRKLALACALSALAGYVDGIGYLHLGGLFVSFMSGNSTRLGVTLAEGHWQHALEALALIV 64 R ++ LA LS +AGYVD IG+L LGG FVSFMSGNSTRLGV LA HW L L+ Sbjct: 6 RGEVMLAVTLSGVAGYVDAIGFLKLGGFFVSFMSGNSTRLGVGLATAHWAAVATVLTLVA 65 Query: 65 LFVAGAAAGSLIVLSALAHRQPLLLLFEAWLLTAAAVAYAYGLPSAAVAAIVLAMGLENA 124 FVAG G+L + +R+ +L+ E LL + A +G +A V A+ +AMG ENA Sbjct: 66 SFVAGVVLGALTARAFGENRRSPVLVLEGILLASGATLLGFGYDTAGVTAVAMAMGAENA 125 Query: 125 VFQLEGGAGLGLTYVTGALVKAGQLIAAALTGGAGWAWLPNLLLWAALVAGALAGAMAYG 184 VFQ G +GLTY+TGALVKAGQ IA AL GG WL +LLW L AG GA+ Y Sbjct: 126 VFQKNGDVAVGLTYMTGALVKAGQRIAGALVGGEPSDWLRYVLLWTGLAAGGALGALTYV 185 Query: 185 WINLAAIWFAAA 196 + AA+W A + Sbjct: 186 TVGAAALWVAVS 197