BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0008.p (529 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774041.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizob... 1016 0.0 ref|YP_533951.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudo... 980 0.0 ref|ZP_01046257.1| D-3-phosphoglycerate dehydrogenase [Nitrobact... 978 0.0 ref|YP_576426.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter... 972 0.0 ref|YP_001237935.1| D-3-phosphoglycerate dehydrogenase [Bradyrhi... 972 0.0 >ref|NP_774041.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC52666.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 529 Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust. Identities = 496/529 (93%), Positives = 517/529 (97%) Query: 1 MTKPKVLISDALSPAAVQIFKDRGVEVDFQPNLGKDKEKLAEIIGNYDGLAIRSATKATA 60 MTKPKVLISDALSPAAVQIFKDRG+EVDFQPNLGKDK+KLAEIIGNYDGLAIRSATKATA Sbjct: 1 MTKPKVLISDALSPAAVQIFKDRGIEVDFQPNLGKDKDKLAEIIGNYDGLAIRSATKATA 60 Query: 61 KLIEKATRLKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITLMLALAREI 120 K++EKAT LKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITLMLALAREI Sbjct: 61 KILEKATNLKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITLMLALAREI 120 Query: 121 PQADASTQAGKWEKNRFMGVEITAKTLGVIGCGNIGTIVADRALGLRMKVIAFDPFLSPE 180 PQADASTQAGKWEKNRFMGVEIT K LGV+GCGNIG+IVADRALGLRMKV+AFDPFLSPE Sbjct: 121 PQADASTQAGKWEKNRFMGVEITGKVLGVVGCGNIGSIVADRALGLRMKVVAFDPFLSPE 180 Query: 181 RAKDIGVEKVELDDLLKRADFITLHTPLTEKTRNVIDAAAIAKMKKGVRIINCARGGLVD 240 RAKDIGVEKV+LDDLLKRADFITLHTPLTEKT+N+IDAAAIAKMKKGVR+INCARGGLVD Sbjct: 181 RAKDIGVEKVDLDDLLKRADFITLHTPLTEKTKNIIDAAAIAKMKKGVRLINCARGGLVD 240 Query: 241 EQALVDALNSKHVAGAAFDVFVEEPATSNVLFGHPNVICTPHLGASTTEAQENVALQVAE 300 EQA+VDALNSKH+AGAAFDVFVEEPA +NVLFGHPNVICTPHLGASTTEAQENVALQVAE Sbjct: 241 EQAVVDALNSKHIAGAAFDVFVEEPANTNVLFGHPNVICTPHLGASTTEAQENVALQVAE 300 Query: 301 QMSDYLLSGAISNAVNFPSITAEEAPKLKPFIELAEKLGSFAGQLTESGILKTEITYEGH 360 QMSDYLL+GAISNAVNFPSITAEEAPKLKPFI LAEKLGSFAGQLTESGILK EITYEGH Sbjct: 301 QMSDYLLTGAISNAVNFPSITAEEAPKLKPFIALAEKLGSFAGQLTESGILKVEITYEGH 360 Query: 361 VAEMKIKAITSAVLSGLLRPMLGEINVVSAPVVAKERGMVVDEVVRAAQSDYESLITVTV 420 VAEMKIKAITSAVLSGLLRPMLGE+NVVSAPVVAKERGMVVDE+VRAAQSDYESLITVTV Sbjct: 361 VAEMKIKAITSAVLSGLLRPMLGEVNVVSAPVVAKERGMVVDEIVRAAQSDYESLITVTV 420 Query: 421 TTERQERSVSGTVYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGAFASLLGDAK 480 TERQERSVSGTVY DGKPRLVD+KGIRVDAEFGKSMIYVTNEDKPGFIGAFASLLG AK Sbjct: 421 ATERQERSVSGTVYHDGKPRLVDVKGIRVDAEFGKSMIYVTNEDKPGFIGAFASLLGAAK 480 Query: 481 INIATFHLGRVKQGGDAIALVEVDGAVPPELLAKVQTLPQVKQAKALTF 529 +NIATFHLGRVK GGDAIALVEVDGAVP ++LAKVQ LPQVKQAKALTF Sbjct: 481 LNIATFHLGRVKLGGDAIALVEVDGAVPADVLAKVQALPQVKQAKALTF 529 >ref|YP_533951.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris BisB18] gb|ABD89632.1| D-3-phosphoglycerate dehydrogenase [Rhodopseudomonas palustris BisB18] Length = 529 Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust. Identities = 484/529 (91%), Positives = 507/529 (95%) Query: 1 MTKPKVLISDALSPAAVQIFKDRGVEVDFQPNLGKDKEKLAEIIGNYDGLAIRSATKATA 60 MT PKVLISDALSPAAVQIFKDRG++VDFQP LGKDKEKLAEIIGNYDGLAIRSATKATA Sbjct: 1 MTAPKVLISDALSPAAVQIFKDRGIDVDFQPALGKDKEKLAEIIGNYDGLAIRSATKATA 60 Query: 61 KLIEKATRLKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITLMLALAREI 120 K++EKATRLKVIGRAGIGVDNVEIPAATA+GIIVMNTPFGNSITTAEHAITLML+LAREI Sbjct: 61 KILEKATRLKVIGRAGIGVDNVEIPAATARGIIVMNTPFGNSITTAEHAITLMLSLAREI 120 Query: 121 PQADASTQAGKWEKNRFMGVEITAKTLGVIGCGNIGTIVADRALGLRMKVIAFDPFLSPE 180 P ADASTQAGKWEKNRFMGVEITAKTLGVIGCGNIG+IVADRALGL+MKVIAFDPFLSPE Sbjct: 121 PAADASTQAGKWEKNRFMGVEITAKTLGVIGCGNIGSIVADRALGLKMKVIAFDPFLSPE 180 Query: 181 RAKDIGVEKVELDDLLKRADFITLHTPLTEKTRNVIDAAAIAKMKKGVRIINCARGGLVD 240 RAKD+GVEKVEL+DL KRADFITLHTPLT+KTRN+IDAAAIAKMKKGVRIINCARGGLVD Sbjct: 181 RAKDLGVEKVELEDLFKRADFITLHTPLTDKTRNIIDAAAIAKMKKGVRIINCARGGLVD 240 Query: 241 EQALVDALNSKHVAGAAFDVFVEEPATSNVLFGHPNVICTPHLGASTTEAQENVALQVAE 300 EQALVDALNSK VAGAAFDVFVEEPAT NVLFGH NVICTPHLGASTTEAQENVALQVAE Sbjct: 241 EQALVDALNSKQVAGAAFDVFVEEPATKNVLFGHANVICTPHLGASTTEAQENVALQVAE 300 Query: 301 QMSDYLLSGAISNAVNFPSITAEEAPKLKPFIELAEKLGSFAGQLTESGILKTEITYEGH 360 QMSDYLL+GAISNAVNFPSITAEEAPKLKPFIELAEKLGSFAGQLTESGI K ITYEG Sbjct: 301 QMSDYLLTGAISNAVNFPSITAEEAPKLKPFIELAEKLGSFAGQLTESGISKVTITYEGA 360 Query: 361 VAEMKIKAITSAVLSGLLRPMLGEINVVSAPVVAKERGMVVDEVVRAAQSDYESLITVTV 420 VAEMKIKA+TSA LSGLLRPMLG++NVVSAPVVAKERGMVVDEVVRAA+SDYESLITVTV Sbjct: 361 VAEMKIKALTSAALSGLLRPMLGDVNVVSAPVVAKERGMVVDEVVRAAESDYESLITVTV 420 Query: 421 TTERQERSVSGTVYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGAFASLLGDAK 480 TT +RSVSGTV+ADG PRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIG FASLLGDAK Sbjct: 421 TTADMKRSVSGTVFADGHPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGKFASLLGDAK 480 Query: 481 INIATFHLGRVKQGGDAIALVEVDGAVPPELLAKVQTLPQVKQAKALTF 529 INIATF+LGR + GGDAIALVEVDGAVP E++AKVQ LPQVKQAKAL F Sbjct: 481 INIATFNLGRHELGGDAIALVEVDGAVPAEVIAKVQALPQVKQAKALVF 529 >ref|ZP_01046257.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter sp. Nb-311A] gb|EAQ35794.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter sp. Nb-311A] Length = 549 Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/529 (90%), Positives = 504/529 (95%) Query: 1 MTKPKVLISDALSPAAVQIFKDRGVEVDFQPNLGKDKEKLAEIIGNYDGLAIRSATKATA 60 MTKPKVLISDALSPAAVQIFKDRG++VDFQP LGKDK+KLAEIIGNYDGLAIRSATKATA Sbjct: 21 MTKPKVLISDALSPAAVQIFKDRGIDVDFQPALGKDKDKLAEIIGNYDGLAIRSATKATA 80 Query: 61 KLIEKATRLKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITLMLALAREI 120 K++ A RLKVIGRAGIGVDNVEIPAATAKG+IVMNTPFGNSITTAEHAITLMLALAREI Sbjct: 81 KILANAKRLKVIGRAGIGVDNVEIPAATAKGVIVMNTPFGNSITTAEHAITLMLALAREI 140 Query: 121 PQADASTQAGKWEKNRFMGVEITAKTLGVIGCGNIGTIVADRALGLRMKVIAFDPFLSPE 180 P ADASTQAGKWEKNRFMGVEIT KTLGVIGCGNIG+IVADRALGL+MKVIAFDPFLSPE Sbjct: 141 PAADASTQAGKWEKNRFMGVEITGKTLGVIGCGNIGSIVADRALGLKMKVIAFDPFLSPE 200 Query: 181 RAKDIGVEKVELDDLLKRADFITLHTPLTEKTRNVIDAAAIAKMKKGVRIINCARGGLVD 240 RAKDIGVEKVELDDL KRADFITLHTPLT+KTRN+IDAAAIAKMKKGVRIINCARGGLVD Sbjct: 201 RAKDIGVEKVELDDLFKRADFITLHTPLTDKTRNIIDAAAIAKMKKGVRIINCARGGLVD 260 Query: 241 EQALVDALNSKHVAGAAFDVFVEEPATSNVLFGHPNVICTPHLGASTTEAQENVALQVAE 300 EQALVDALN+K VAGAAFDVFVEEPAT NVLFGHP VICTPHLGASTTEAQENVALQVAE Sbjct: 261 EQALVDALNAKQVAGAAFDVFVEEPATKNVLFGHPGVICTPHLGASTTEAQENVALQVAE 320 Query: 301 QMSDYLLSGAISNAVNFPSITAEEAPKLKPFIELAEKLGSFAGQLTESGILKTEITYEGH 360 QMSDYLL+GAI+NA+NFPSITAEEAPKLKPF+ LAEKLGSFAGQLTE+GI K ITYEG Sbjct: 321 QMSDYLLNGAITNAINFPSITAEEAPKLKPFVSLAEKLGSFAGQLTETGISKVTITYEGQ 380 Query: 361 VAEMKIKAITSAVLSGLLRPMLGEINVVSAPVVAKERGMVVDEVVRAAQSDYESLITVTV 420 VAEMKIKA+TSA LSGLLRPMLG++NVVSAPVVAKERGMVVDEVVRAAQSDYESLITVTV Sbjct: 381 VAEMKIKALTSAALSGLLRPMLGDVNVVSAPVVAKERGMVVDEVVRAAQSDYESLITVTV 440 Query: 421 TTERQERSVSGTVYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGAFASLLGDAK 480 TERQERSVSGTVYADG PRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIG FASLLGDA Sbjct: 441 FTERQERSVSGTVYADGHPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGRFASLLGDAG 500 Query: 481 INIATFHLGRVKQGGDAIALVEVDGAVPPELLAKVQTLPQVKQAKALTF 529 +NIATF+LGR QGGDAIALVEVDG+VP +LAKVQ LPQVKQAKALTF Sbjct: 501 LNIATFNLGRHSQGGDAIALVEVDGSVPENVLAKVQALPQVKQAKALTF 549 >ref|YP_576426.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter hamburgensis X14] gb|ABE61966.1| D-3-phosphoglycerate dehydrogenase [Nitrobacter hamburgensis X14] Length = 529 Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust. Identities = 476/529 (89%), Positives = 504/529 (95%) Query: 1 MTKPKVLISDALSPAAVQIFKDRGVEVDFQPNLGKDKEKLAEIIGNYDGLAIRSATKATA 60 MTKPKVLISDALSPAAVQIFKDRG+EVDFQP LGKDK+KLAEIIGNYDGLAIRSATKATA Sbjct: 1 MTKPKVLISDALSPAAVQIFKDRGIEVDFQPALGKDKDKLAEIIGNYDGLAIRSATKATA 60 Query: 61 KLIEKATRLKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITLMLALAREI 120 K++ A +LKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITLMLALAREI Sbjct: 61 KILANAKKLKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITLMLALAREI 120 Query: 121 PQADASTQAGKWEKNRFMGVEITAKTLGVIGCGNIGTIVADRALGLRMKVIAFDPFLSPE 180 P ADASTQAGKWEKNRFMGVEIT K LG+IGCGNIG+IVADRALGL+MKVIAFDPFLSPE Sbjct: 121 PAADASTQAGKWEKNRFMGVEITNKILGIIGCGNIGSIVADRALGLKMKVIAFDPFLSPE 180 Query: 181 RAKDIGVEKVELDDLLKRADFITLHTPLTEKTRNVIDAAAIAKMKKGVRIINCARGGLVD 240 RAKD+GV+KVEL+DL KRADFITLHTPLT+KTRN+IDAAAIAKMKKGVRIINCARGGLVD Sbjct: 181 RAKDLGVDKVELEDLFKRADFITLHTPLTDKTRNIIDAAAIAKMKKGVRIINCARGGLVD 240 Query: 241 EQALVDALNSKHVAGAAFDVFVEEPATSNVLFGHPNVICTPHLGASTTEAQENVALQVAE 300 EQAL DALN+KHVAGAAFDVFVEEPAT NVLFGHPNVICTPHLGAST+EAQENVALQVAE Sbjct: 241 EQALADALNAKHVAGAAFDVFVEEPATKNVLFGHPNVICTPHLGASTSEAQENVALQVAE 300 Query: 301 QMSDYLLSGAISNAVNFPSITAEEAPKLKPFIELAEKLGSFAGQLTESGILKTEITYEGH 360 QMSDYLL+GAI+NA+NFPSITAEEAPKLKPF+ELAEKLGSFAGQLTE+GI K ITYEG Sbjct: 301 QMSDYLLTGAITNALNFPSITAEEAPKLKPFVELAEKLGSFAGQLTETGISKVIITYEGQ 360 Query: 361 VAEMKIKAITSAVLSGLLRPMLGEINVVSAPVVAKERGMVVDEVVRAAQSDYESLITVTV 420 VAEMKIKA+TSA LSGLLRPMLG++NVVSAPVVAKERGMVVDEVVRAAQSD+ESLITVTV Sbjct: 361 VAEMKIKALTSAALSGLLRPMLGDVNVVSAPVVAKERGMVVDEVVRAAQSDHESLITVTV 420 Query: 421 TTERQERSVSGTVYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGAFASLLGDAK 480 TERQ+RSVSGTVYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIG FASLLGDA Sbjct: 421 ATERQKRSVSGTVYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGKFASLLGDAG 480 Query: 481 INIATFHLGRVKQGGDAIALVEVDGAVPPELLAKVQTLPQVKQAKALTF 529 +NIATF+LGR QGGDAIALVEVDG VP +LAKVQ LPQVKQ KALTF Sbjct: 481 VNIATFNLGRHGQGGDAIALVEVDGNVPENVLAKVQALPQVKQVKALTF 529 >ref|YP_001237935.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ34029.1| D-3-phosphoglycerate dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 529 Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/529 (89%), Positives = 505/529 (95%) Query: 1 MTKPKVLISDALSPAAVQIFKDRGVEVDFQPNLGKDKEKLAEIIGNYDGLAIRSATKATA 60 M+KPKVLISDALSPAAVQIFKDRGVEVDFQPNLGKDK+KLA+IIG+YDGLAIRSATKATA Sbjct: 1 MSKPKVLISDALSPAAVQIFKDRGVEVDFQPNLGKDKDKLADIIGDYDGLAIRSATKATA 60 Query: 61 KLIEKATRLKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITLMLALAREI 120 K+IE+A RLKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAIT+ML+LAREI Sbjct: 61 KIIERAKRLKVIGRAGIGVDNVEIPAATAKGIIVMNTPFGNSITTAEHAITMMLSLAREI 120 Query: 121 PQADASTQAGKWEKNRFMGVEITAKTLGVIGCGNIGTIVADRALGLRMKVIAFDPFLSPE 180 PQADASTQAGKWEKNRFMGVEIT KTLGVIGCGNIG+IV DRA GLRMKVI FDPFL+ E Sbjct: 121 PQADASTQAGKWEKNRFMGVEITGKTLGVIGCGNIGSIVCDRAQGLRMKVIGFDPFLTEE 180 Query: 181 RAKDIGVEKVELDDLLKRADFITLHTPLTEKTRNVIDAAAIAKMKKGVRIINCARGGLVD 240 RA+D+GVEKVELD+LLKRADFITLHTPLT+KTRN+IDAAAIAKMK+GVRIINCARGGL+D Sbjct: 181 RARDLGVEKVELDELLKRADFITLHTPLTDKTRNIIDAAAIAKMKQGVRIINCARGGLID 240 Query: 241 EQALVDALNSKHVAGAAFDVFVEEPATSNVLFGHPNVICTPHLGASTTEAQENVALQVAE 300 EQAL+ ALNSKHVAGAA DVF EEPATSN LFGHP+VICTPHLGASTTEAQENVALQ+AE Sbjct: 241 EQALLAALNSKHVAGAALDVFAEEPATSNPLFGHPSVICTPHLGASTTEAQENVALQIAE 300 Query: 301 QMSDYLLSGAISNAVNFPSITAEEAPKLKPFIELAEKLGSFAGQLTESGILKTEITYEGH 360 QMSDYLL+GAISNA+NFPSITAEEAPKLKPFI LAEKLGSFAGQLTES I K +ITYEG Sbjct: 301 QMSDYLLTGAISNAINFPSITAEEAPKLKPFIALAEKLGSFAGQLTESSITKIQITYEGQ 360 Query: 361 VAEMKIKAITSAVLSGLLRPMLGEINVVSAPVVAKERGMVVDEVVRAAQSDYESLITVTV 420 VAEMK KA+TSAVL+GLLRPMLGE+NVVSAPV+AKERGM+VDEV+RA +SDYESLITV V Sbjct: 361 VAEMKTKALTSAVLAGLLRPMLGEVNVVSAPVIAKERGMIVDEVLRAGESDYESLITVAV 420 Query: 421 TTERQERSVSGTVYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGAFASLLGDAK 480 TTE+QER+VSGTVYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIG FASLLGDAK Sbjct: 421 TTEQQERAVSGTVYADGKPRLVDIKGIRVDAEFGKSMIYVTNEDKPGFIGKFASLLGDAK 480 Query: 481 INIATFHLGRVKQGGDAIALVEVDGAVPPELLAKVQTLPQVKQAKALTF 529 INIATFHLGRV G DAIALVE+DGAVP ELLAK+Q LPQVKQAKALTF Sbjct: 481 INIATFHLGRVAAGSDAIALVEIDGAVPAELLAKIQALPQVKQAKALTF 529