BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0006.p (160 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773720.1| hypothetical protein bll7080 [Bradyrhizobium ja... 215 2e-54 ref|YP_001237936.1| hypothetical protein BBta_1827 [Bradyrhizobi... 207 3e-52 ref|YP_001207820.1| putative signal peptide [Bradyrhizobium sp. ... 203 8e-51 ref|ZP_08071926.1| hypothetical protein Met49242DRAFT_1313 [Meth... 105 2e-21 ref|YP_004674838.1| hypothetical protein HYPMC_1031 [Hyphomicrob... 72 2e-11 >ref|NP_773720.1| hypothetical protein bll7080 [Bradyrhizobium japonicum USDA 110] emb|CAC38742.1| hypothetical protein [Bradyrhizobium japonicum] dbj|BAC52345.1| bll7080 [Bradyrhizobium japonicum USDA 110] Length = 560 Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 109/159 (68%), Positives = 131/159 (82%), Gaps = 1/159 (0%) Query: 2 TTSLVLAGTLVAGPLHAANLDAASQVDAVTVYPDGASVTRVITLDLPAGDNTLIARDFPM 61 TTSLVL T A P AA++DA S +D VTVYPDGA+VTR+IT+DLP+GD+TL+A+DFP+ Sbjct: 10 TTSLVLVTTAFALPSWAADVDATSAIDTVTVYPDGATVTRIITVDLPSGDSTLVAKDFPL 69 Query: 62 GLDPSSLRVEGEGGAKLTIGAIDTKLPGPLLPQNLSEIDKRIEALDDQRADLQGLISAAE 121 GLD SS+RVEGEGGAKLTIG ID + P P NL E+DKRIEAL+DQRADLQG I +A Sbjct: 70 GLDTSSIRVEGEGGAKLTIGTIDARTPR-AAPVNLPELDKRIEALNDQRADLQGAIDSAN 128 Query: 122 ARRKFAERFAEASPAGLGEKVEALPLSEWRPAFSAVADE 160 ARRKFAE FAEASPAG+G+K EA P++EWR AF+AV +E Sbjct: 129 ARRKFAEHFAEASPAGIGDKGEARPIAEWRTAFAAVGEE 167 >ref|YP_001237936.1| hypothetical protein BBta_1827 [Bradyrhizobium sp. BTAi1] gb|ABQ34030.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 551 Score = 207 bits (528), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 109/158 (68%), Positives = 122/158 (77%) Query: 3 TSLVLAGTLVAGPLHAANLDAASQVDAVTVYPDGASVTRVITLDLPAGDNTLIARDFPMG 62 T LVL L A P HAAN D S VDAVTVYPDGASVTRVI LDLPAGD T IA+DFP+G Sbjct: 9 TGLVLGAALSAAPGHAANRDVTSTVDAVTVYPDGASVTRVIALDLPAGDTTAIAKDFPLG 68 Query: 63 LDPSSLRVEGEGGAKLTIGAIDTKLPGPLLPQNLSEIDKRIEALDDQRADLQGLISAAEA 122 LD SSLRVEGE GAKL IG +D K P N+ EIDKRIE+L D+RA+L G I+AA A Sbjct: 69 LDASSLRVEGEAGAKLVIGTVDAKPPRAAPSANVPEIDKRIESLKDERANLDGAIAAALA 128 Query: 123 RRKFAERFAEASPAGLGEKVEALPLSEWRPAFSAVADE 160 R+KFAERFA ASPAGLGEK EA P++EWR AF+AV +E Sbjct: 129 RKKFAERFAAASPAGLGEKGEARPVAEWRNAFAAVGEE 166 >ref|YP_001207820.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL79605.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 554 Score = 203 bits (516), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 104/147 (70%), Positives = 120/147 (81%) Query: 14 GPLHAANLDAASQVDAVTVYPDGASVTRVITLDLPAGDNTLIARDFPMGLDPSSLRVEGE 73 GP AANLDA S VDAVTVYPDGA+VTRVI LDLPAG++T IA+DFP+G D +SLRVEGE Sbjct: 20 GPGVAANLDATSTVDAVTVYPDGATVTRVIALDLPAGESTAIAKDFPIGFDAASLRVEGE 79 Query: 74 GGAKLTIGAIDTKLPGPLLPQNLSEIDKRIEALDDQRADLQGLISAAEARRKFAERFAEA 133 GAKL IG +D K P P NL EID RIEAL D+ A+L G I+AA+AR+KFAERFAEA Sbjct: 80 AGAKLAIGTVDAKPPRAAPPVNLPEIDSRIEALQDEHANLDGAIAAAQARKKFAERFAEA 139 Query: 134 SPAGLGEKVEALPLSEWRPAFSAVADE 160 SPAGLGEK EA P++EWR AF+AVA+E Sbjct: 140 SPAGLGEKGEARPIAEWRNAFAAVAEE 166 >ref|ZP_08071926.1| hypothetical protein Met49242DRAFT_1313 [Methylocystis sp. ATCC 49242] gb|EFY00683.1| hypothetical protein Met49242DRAFT_1313 [Methylocystis sp. ATCC 49242] Length = 559 Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 61/140 (43%), Positives = 86/140 (61%) Query: 18 AANLDAASQVDAVTVYPDGASVTRVITLDLPAGDNTLIARDFPMGLDPSSLRVEGEGGAK 77 A ++A S V AVTV+PD A+VTR T+ LPAG +T++ R P GLDP+SLRV GEGGA+ Sbjct: 19 AREIEAKSAVAAVTVHPDAATVTREATVVLPAGASTIVFRGLPYGLDPASLRVSGEGGAR 78 Query: 78 LTIGAIDTKLPGPLLPQNLSEIDKRIEALDDQRADLQGLISAAEARRKFAERFAEASPAG 137 +IGA++T+L S I R++AL +R +Q + A A+ R+++ASP Sbjct: 79 FSIGAVETRLTPADAKAPDSAIAARLKALRAERDSVQTKLDALAAKLAMILRYSQASPER 138 Query: 138 LGEKVEALPLSEWRPAFSAV 157 L + + SEW AF AV Sbjct: 139 LSPETRPMQASEWNAAFEAV 158 >ref|YP_004674838.1| hypothetical protein HYPMC_1031 [Hyphomicrobium sp. MC1] emb|CCB64264.1| conserved exported protein of unknown function [Hyphomicrobium sp. MC1] Length = 563 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 14/157 (8%) Query: 12 VAGPLHAANLDAASQVDAVTVYPDGASVTRVITLDLPAGDNTLIARDFPMGLDPSSLRVE 71 ++ P AA + A S VDAVTV+ GA VTR+ L G++T++ D P P S+RVE Sbjct: 17 LSAPAFAAQVPATSAVDAVTVFLSGAEVTRLAKAHLDKGEHTIVVGDLPASAIPGSIRVE 76 Query: 72 GEGGAKLTIGAIDTKLPGPLLPQNLSE--------IDKRIEALDDQRADLQGLISAAEAR 123 G KL IG++DT +L + SE ++ +I+ L DQR ++ AA+ + Sbjct: 77 GRASGKLDIGSVDTA--QKMLQRAESEAADAQRKILEDKIQTLKDQRKTIEAQALAAKTQ 134 Query: 124 RKFAERFAE--ASPAGLGEKVEALPLSEWRPAFSAVA 158 +K A+ PA G+ A L +W + +A Sbjct: 135 QKLIANLAQLPTRPAPQGQP--ATSLDDWTKVLALIA 169