BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0004.p (171 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773720.1| hypothetical protein bll7080 [Bradyrhizobium ja... 290 7e-77 ref|YP_001207820.1| putative signal peptide [Bradyrhizobium sp. ... 281 3e-74 ref|YP_001237936.1| hypothetical protein BBta_1827 [Bradyrhizobi... 273 9e-72 ref|ZP_08071926.1| hypothetical protein Met49242DRAFT_1313 [Meth... 165 3e-39 ref|YP_004674838.1| hypothetical protein HYPMC_1031 [Hyphomicrob... 130 5e-29 >ref|NP_773720.1| hypothetical protein bll7080 [Bradyrhizobium japonicum USDA 110] emb|CAC38742.1| hypothetical protein [Bradyrhizobium japonicum] dbj|BAC52345.1| bll7080 [Bradyrhizobium japonicum USDA 110] Length = 560 Score = 290 bits (741), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 133/171 (77%), Positives = 159/171 (92%) Query: 1 VIDPTAFLEASFVQADDAPLLPGQISIYRDGIFVGRSRMATAAKDETVRLGFGADDKVKI 60 V+D TAFLEASF Q D+A LLPG+++IYRDG+FVGR +++ +AKD+ VRLGFGADDKVKI Sbjct: 390 VMDSTAFLEASFKQTDEATLLPGKVAIYRDGVFVGRGKISASAKDDIVRLGFGADDKVKI 449 Query: 61 ERTVVKRNEGSAGLIVTTAKTDERAFKTAVRNGHDFPIKVAIQDQLPVSENDDIVVEMLP 120 ER V+KRNEGSAGL+VTT+KTDER+FKT VRNGHDFPI+VAI+DQLPVSEN+DIVVEMLP Sbjct: 450 ERAVLKRNEGSAGLLVTTSKTDERSFKTTVRNGHDFPIRVAIEDQLPVSENEDIVVEMLP 509 Query: 121 SSTPATTTNLRDKRGVLEWAFEAKAGEVRDVNFAWRMRWPKDKGVVMVPAG 171 S+TP T +N+RDKRGVLEW+F+AK GEVRDVNFAWR+RWPKDKG+V+VPAG Sbjct: 510 STTPPTASNIRDKRGVLEWSFDAKPGEVRDVNFAWRIRWPKDKGMVIVPAG 560 >ref|YP_001207820.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL79605.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 554 Score = 281 bits (719), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 127/171 (74%), Positives = 152/171 (88%) Query: 1 VIDPTAFLEASFVQADDAPLLPGQISIYRDGIFVGRSRMATAAKDETVRLGFGADDKVKI 60 V DPTA+LEA F Q DDAPLLPG++SIYRDG+FVG SR+ATA KDE VR+GFGADDKVK+ Sbjct: 384 VADPTAYLEAGFTQGDDAPLLPGKVSIYRDGMFVGSSRLATAGKDEMVRIGFGADDKVKV 443 Query: 61 ERTVVKRNEGSAGLIVTTAKTDERAFKTAVRNGHDFPIKVAIQDQLPVSENDDIVVEMLP 120 ER+V+KRNEGSAGLIVTTAK DERAFKT VRN HDFP+KVAIQDQLPVSEN++IVVEMLP Sbjct: 444 ERSVIKRNEGSAGLIVTTAKIDERAFKTTVRNAHDFPVKVAIQDQLPVSENEEIVVEMLP 503 Query: 121 SSTPATTTNLRDKRGVLEWAFEAKAGEVRDVNFAWRMRWPKDKGVVMVPAG 171 ++TP T TN+R++RGV EW +AK GE ++++FAWR+RWPKDK +VM P+G Sbjct: 504 ATTPPTATNVRERRGVTEWVVDAKPGETKEISFAWRVRWPKDKAIVMQPSG 554 >ref|YP_001237936.1| hypothetical protein BBta_1827 [Bradyrhizobium sp. BTAi1] gb|ABQ34030.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 551 Score = 273 bits (697), Expect = 9e-72, Method: Compositional matrix adjust. Identities = 124/171 (72%), Positives = 150/171 (87%) Query: 1 VIDPTAFLEASFVQADDAPLLPGQISIYRDGIFVGRSRMATAAKDETVRLGFGADDKVKI 60 ++DPTA+LEASF Q +DAPLLPG++SIYRDG+FVG S MA A K E VR+GFGADDKVKI Sbjct: 381 IVDPTAYLEASFPQTEDAPLLPGKVSIYRDGMFVGTSNMAHAGKGEPVRVGFGADDKVKI 440 Query: 61 ERTVVKRNEGSAGLIVTTAKTDERAFKTAVRNGHDFPIKVAIQDQLPVSENDDIVVEMLP 120 ER+V+KRNEGSAGLIVTTAK DERAFKT +RN HDFP+KVAIQDQLPVSEN++I VEMLP Sbjct: 441 ERSVIKRNEGSAGLIVTTAKIDERAFKTTIRNAHDFPVKVAIQDQLPVSENEEIAVEMLP 500 Query: 121 SSTPATTTNLRDKRGVLEWAFEAKAGEVRDVNFAWRMRWPKDKGVVMVPAG 171 S+TP T+ N+RD+RGV EW +AK GE +D++FAWR+RWPKDK +V+ P+G Sbjct: 501 STTPPTSLNVRDRRGVTEWIVDAKPGETKDISFAWRVRWPKDKTIVLNPSG 551 >ref|ZP_08071926.1| hypothetical protein Met49242DRAFT_1313 [Methylocystis sp. ATCC 49242] gb|EFY00683.1| hypothetical protein Met49242DRAFT_1313 [Methylocystis sp. ATCC 49242] Length = 559 Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 79/173 (45%), Positives = 110/173 (63%), Gaps = 5/173 (2%) Query: 2 IDPTAFLEASFVQADDAPLLPGQISIYRDGIFVGRSRMATAAKDETVRLGFGADDKVKIE 61 +DPTA+L A V +DAPLLPG +++ RDG++VG +R+A A E GFG DDKVK+ Sbjct: 387 LDPTAYLNARLVNDEDAPLLPGPLTVLRDGVYVGETRLALIAPGEAADFGFGVDDKVKVT 446 Query: 62 RTVVKRNEGSAGLIVTTAKTDERAFKTAVRNGHDFPIKVAIQDQLPVSENDDIVVEMLPS 121 R VKR+E G K + R +KT V+N H FP+ V + DQ+PVSEN IVVE LP Sbjct: 447 RAPVKRSENEPGWF-GQMKMELRDYKTTVKNLHGFPVAVTVVDQVPVSENSSIVVEQLPQ 505 Query: 122 STPATTTNL----RDKRGVLEWAFEAKAGEVRDVNFAWRMRWPKDKGVVMVPA 170 +TPA+ D+RG+L W+F+ G +++ AWR++WP D+ +V PA Sbjct: 506 TTPASEKQADRTPGDRRGILSWSFDLPPGAAKELRLAWRVKWPADREIVAQPA 558 >ref|YP_004674838.1| hypothetical protein HYPMC_1031 [Hyphomicrobium sp. MC1] emb|CCB64264.1| conserved exported protein of unknown function [Hyphomicrobium sp. MC1] Length = 563 Score = 130 bits (328), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 67/168 (39%), Positives = 102/168 (60%), Gaps = 2/168 (1%) Query: 2 IDPTAFLEASFVQADDAPLLPGQISIYRDGIFVGRSRMATAAKDETVRLGFGADDKVKIE 61 +D A+L A A +P+LPG + ++RDG FVG + E +GFG DD+VK++ Sbjct: 398 VDTNAYLYARINVAKGSPMLPGTVYLFRDGTFVGTGNLPLLRPGEDHDIGFGVDDQVKVK 457 Query: 62 RTVVKRNEGSAGLIVTTAKTDERAFKTAVRNGHDFPIKVAIQDQLPVSENDDIVVEMLPS 121 V++ G GLI +T+ D R F+ V+N H+ PI V I D++PVS+NDDI VEM Sbjct: 458 HAVLEDKRGETGLI-STSHVDSRNFQVNVKNMHERPIDVTILDRVPVSQNDDIKVEMTGK 516 Query: 122 STPATTTNLRDKRGVLEWAFEAKAGEVRDVNFAWRMRWPKDKGVVMVP 169 ++P TTTN+ DKRGV+ + + + E + + + +R+ WP K +V P Sbjct: 517 ASP-TTTNVDDKRGVIAFQAKLEPDEEKILEYGYRVSWPASKSIVYGP 563