BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0082.0002.p (450 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773710.1| hypothetical protein blr7070 [Bradyrhizobium ja... 839 0.0 ref|YP_533948.1| hypothetical protein RPC_4103 [Rhodopseudomonas... 830 0.0 ref|YP_001237950.1| hypothetical protein BBta_1841 [Bradyrhizobi... 827 0.0 ref|YP_001207816.1| putative signal peptide [Bradyrhizobium sp. ... 810 0.0 ref|YP_001993750.1| hypothetical protein Rpal_4785 [Rhodopseudom... 769 0.0 >ref|NP_773710.1| hypothetical protein blr7070 [Bradyrhizobium japonicum USDA 110] dbj|BAC52335.1| blr7070 [Bradyrhizobium japonicum USDA 110] Length = 451 Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust. Identities = 400/451 (88%), Positives = 427/451 (94%), Gaps = 1/451 (0%) Query: 1 MRLSLLCSVASILL-ATSAFAQSEGEFPATLAGHAVMPAESFIDAPADTPNDLKTSGKYT 59 MR + L +VA+I+L A++A AQSEGEFPA LAGH VMPAESFIDAPAD P DLKTSGKYT Sbjct: 1 MRATFLATVATIILTASTALAQSEGEFPARLAGHVVMPAESFIDAPADAPADLKTSGKYT 60 Query: 60 TGKRVDAIGTVMGKSYERPTGVSLPFKGQPLQGHSGIKVMPDGSFWVITDNGMGSRYNSA 119 TGKRVDA+GTVMGKSYER TGVSLPFKGQPLQGHSGIK MPDGSFWVITDNGMG+R NS Sbjct: 61 TGKRVDALGTVMGKSYERATGVSLPFKGQPLQGHSGIKTMPDGSFWVITDNGMGARANSP 120 Query: 120 DSMLYLNRHKIDWANGKIERQETVFLHDPDRKVPFRIVHEDTAKRYLTGADFDTEGFQII 179 DSMLYLNR+K+DWA+GKIERQET+FLHDPDR+VPFRIVHEDT KRYLTG+DFDTEGFQII Sbjct: 121 DSMLYLNRYKMDWASGKIERQETIFLHDPDRRVPFRIVHEDTQKRYLTGSDFDTEGFQII 180 Query: 180 NDIFWIGDEFGPYILKADKTGKILAVFETVADGKPVRSPDHWAVQSPGAPGASYTNVNLR 239 D FWIGDEFGPYILKADKTGKIL VFETVADGKPVRSPDHWAV +PGAPGA+YTNVNLR Sbjct: 181 GDTFWIGDEFGPYILKADKTGKILGVFETVADGKPVRSPDHWAVTTPGAPGATYTNVNLR 240 Query: 240 RSKGYEGFASSKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYWQ 299 RSKG+EGFASSKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYWQ Sbjct: 241 RSKGFEGFASSKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYWQ 300 Query: 300 YVFEQNGNAIGDFNMIDPAQGLVIERDNGEGTADKACPQGQRGENCFPDLAKFKRVYKIE 359 YVFEQNGNAIGDFNMIDP GL+IERDNGEGTADKACPQG RG+NCFPDLAKFKRVYKIE Sbjct: 301 YVFEQNGNAIGDFNMIDPINGLIIERDNGEGTADKACPQGTRGDNCFPDLAKFKRVYKIE 360 Query: 360 LSDANVGKPVRKIAHIDLMKIRDPNKKARKPLNDGVYTFPFFTIENVDRVDETHIIVGND 419 L++ANVGKPVRKI +IDL+KI+DP+KKARKPLNDGVYTFPFFTIENVDRVD+ HIIVGND Sbjct: 361 LTEANVGKPVRKIGYIDLLKIKDPDKKARKPLNDGVYTFPFFTIENVDRVDDAHIIVGND 420 Query: 420 NNLPFSSSRDPNKADDDEFVLLEVGDFLKAK 450 NNLPFSSSRDPNKADDDEF+LLEV DFLKAK Sbjct: 421 NNLPFSSSRDPNKADDDEFMLLEVADFLKAK 451 >ref|YP_533948.1| hypothetical protein RPC_4103 [Rhodopseudomonas palustris BisB18] gb|ABD89629.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 451 Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/451 (87%), Positives = 425/451 (94%), Gaps = 1/451 (0%) Query: 1 MRLSLLCSVASILLA-TSAFAQSEGEFPATLAGHAVMPAESFIDAPADTPNDLKTSGKYT 59 MR++LLCSVA++ L T+A AQ+EGEFPATLAGHAV+PA+SFIDAP D P+DLKTSGKYT Sbjct: 1 MRITLLCSVAALALGVTTAVAQTEGEFPATLAGHAVLPAQSFIDAPKDAPDDLKTSGKYT 60 Query: 60 TGKRVDAIGTVMGKSYERPTGVSLPFKGQPLQGHSGIKVMPDGSFWVITDNGMGSRYNSA 119 TGKRV+A+G+VMGKSYERPTGVSLPFKGQPLQGHSGIKVMPDGSFWV+TDNGMGSRYNSA Sbjct: 61 TGKRVEALGSVMGKSYERPTGVSLPFKGQPLQGHSGIKVMPDGSFWVLTDNGMGSRYNSA 120 Query: 120 DSMLYLNRHKIDWANGKIERQETVFLHDPDRKVPFRIVHEDTAKRYLTGADFDTEGFQII 179 DSMLYLNRHKIDWA GKIERQETVFLHDPD+KVPFRIVHEDTAKRYLTGADFDTEGFQII Sbjct: 121 DSMLYLNRHKIDWAGGKIERQETVFLHDPDKKVPFRIVHEDTAKRYLTGADFDTEGFQII 180 Query: 180 NDIFWIGDEFGPYILKADKTGKILAVFETVADGKPVRSPDHWAVQSPGAPGASYTNVNLR 239 D FWIGDEFGPYILK DK GK+LAVFET ADGKPV+SPDHW+VQSPGAPGASYT VNLR Sbjct: 181 GDTFWIGDEFGPYILKTDKAGKVLAVFETFADGKPVKSPDHWSVQSPGAPGASYTGVNLR 240 Query: 240 RSKGYEGFASSKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYWQ 299 RSKG+EGFASSKDGKFLYGLLEGPLW+A+ KDWEKVDG EASRI+EFDVAAEKFTGRYWQ Sbjct: 241 RSKGFEGFASSKDGKFLYGLLEGPLWNAESKDWEKVDGHEASRIVEFDVAAEKFTGRYWQ 300 Query: 300 YVFEQNGNAIGDFNMIDPAQGLVIERDNGEGTADKACPQGQRGENCFPDLAKFKRVYKIE 359 YVFEQNGNAIGDFNMID + GL+IERDNGEGT DKAC + RG +CFPDLA+FKRV KIE Sbjct: 301 YVFEQNGNAIGDFNMIDASHGLIIERDNGEGTKDKACAEANRGADCFPDLARFKRVVKIE 360 Query: 360 LSDANVGKPVRKIAHIDLMKIRDPNKKARKPLNDGVYTFPFFTIENVDRVDETHIIVGND 419 LSDANVGKPVRKI +IDLMKIRDPN KA+KPLNDGV TFPFFTIENVD+VD+THIIVGND Sbjct: 361 LSDANVGKPVRKIGYIDLMKIRDPNHKAKKPLNDGVLTFPFFTIENVDQVDDTHIIVGND 420 Query: 420 NNLPFSSSRDPNKADDDEFVLLEVGDFLKAK 450 NNLPFSSSRDPNKADD+EFVLLEVGDFLKAK Sbjct: 421 NNLPFSSSRDPNKADDNEFVLLEVGDFLKAK 451 >ref|YP_001237950.1| hypothetical protein BBta_1841 [Bradyrhizobium sp. BTAi1] gb|ABQ34044.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 451 Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/451 (87%), Positives = 426/451 (94%), Gaps = 1/451 (0%) Query: 1 MRLSLLCSVASILL-ATSAFAQSEGEFPATLAGHAVMPAESFIDAPADTPNDLKTSGKYT 59 M LL +VA+++L A +A AQ EGEFPATLAGHAVMPAESF+DAPAD P DLKTSGKYT Sbjct: 1 MHRYLLTTVAAVVLTAGAALAQGEGEFPATLAGHAVMPAESFVDAPADAPVDLKTSGKYT 60 Query: 60 TGKRVDAIGTVMGKSYERPTGVSLPFKGQPLQGHSGIKVMPDGSFWVITDNGMGSRYNSA 119 TGKR+DAIGTVMGKSYER TGVSLPFKGQPLQGHSGIK M DG+FWV+TDNGMGSRYNS Sbjct: 61 TGKRIDAIGTVMGKSYERATGVSLPFKGQPLQGHSGIKKMADGTFWVLTDNGMGSRYNSP 120 Query: 120 DSMLYLNRHKIDWANGKIERQETVFLHDPDRKVPFRIVHEDTAKRYLTGADFDTEGFQII 179 DSMLYLN +KIDW+ GK+ER ET+FLHDP+RKVPFRI+HEDTA+RYLTGADFDTEGFQII Sbjct: 121 DSMLYLNHYKIDWSTGKVERLETIFLHDPERKVPFRIIHEDTARRYLTGADFDTEGFQII 180 Query: 180 NDIFWIGDEFGPYILKADKTGKILAVFETVADGKPVRSPDHWAVQSPGAPGASYTNVNLR 239 D WIGDEFGPYI+KADK GK+LAVFETVADGKPVRSPDHWAVQSPGAPGA+Y+NVNLR Sbjct: 181 GDNLWIGDEFGPYIIKADKGGKVLAVFETVADGKPVRSPDHWAVQSPGAPGATYSNVNLR 240 Query: 240 RSKGYEGFASSKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYWQ 299 RSKG+EGFASS DGKF+YGLLEGPLWD +KK+WEKVDGKEASRILEFDVAAEKFTGRYWQ Sbjct: 241 RSKGFEGFASSVDGKFIYGLLEGPLWDGEKKEWEKVDGKEASRILEFDVAAEKFTGRYWQ 300 Query: 300 YVFEQNGNAIGDFNMIDPAQGLVIERDNGEGTADKACPQGQRGENCFPDLAKFKRVYKIE 359 YVFEQNGNAIGDFNMIDP+QGLVIERDNGEGT+DKACPQG RGENCFPD+AKFKRVYKIE Sbjct: 301 YVFEQNGNAIGDFNMIDPSQGLVIERDNGEGTSDKACPQGVRGENCFPDVAKFKRVYKIE 360 Query: 360 LSDANVGKPVRKIAHIDLMKIRDPNKKARKPLNDGVYTFPFFTIENVDRVDETHIIVGND 419 LSDANVGKPVRKIA+IDLMKI+DP+KKARKPLNDGV TFPFFTIENVDRVD+THIIVGND Sbjct: 361 LSDANVGKPVRKIAYIDLMKIKDPDKKARKPLNDGVLTFPFFTIENVDRVDDTHIIVGND 420 Query: 420 NNLPFSSSRDPNKADDDEFVLLEVGDFLKAK 450 NNLPFSSSR+PNKADDDEFVLLEVGDFLKAK Sbjct: 421 NNLPFSSSREPNKADDDEFVLLEVGDFLKAK 451 >ref|YP_001207816.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL79601.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 451 Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/430 (89%), Positives = 413/430 (96%) Query: 21 QSEGEFPATLAGHAVMPAESFIDAPADTPNDLKTSGKYTTGKRVDAIGTVMGKSYERPTG 80 Q EGEFPATLAGHAV+PAESFIDAPAD P+DLKTSGKYTTGKRVD IG+VMGKS+ERPTG Sbjct: 22 QGEGEFPATLAGHAVLPAESFIDAPADAPDDLKTSGKYTTGKRVDTIGSVMGKSFERPTG 81 Query: 81 VSLPFKGQPLQGHSGIKVMPDGSFWVITDNGMGSRYNSADSMLYLNRHKIDWANGKIERQ 140 VSLPFKGQPLQGHSGIK M DG+FWV+TDNGMG+R NS DSMLYLN +KIDW +GK+ER Sbjct: 82 VSLPFKGQPLQGHSGIKKMADGTFWVLTDNGMGARSNSPDSMLYLNHYKIDWTSGKVERL 141 Query: 141 ETVFLHDPDRKVPFRIVHEDTAKRYLTGADFDTEGFQIINDIFWIGDEFGPYILKADKTG 200 ET+FLHDPD+KVPFRIVHEDTAKRYLTG+DFDTEGFQ+I D WIGDEFGPYI+KADKTG Sbjct: 142 ETIFLHDPDKKVPFRIVHEDTAKRYLTGSDFDTEGFQLIGDNIWIGDEFGPYIIKADKTG 201 Query: 201 KILAVFETVADGKPVRSPDHWAVQSPGAPGASYTNVNLRRSKGYEGFASSKDGKFLYGLL 260 K+LAVFETVADGKPVRSPDHWAVQSPGAPGA+YTNVNLRRSKG+EGFASS DGKF+YGLL Sbjct: 202 KVLAVFETVADGKPVRSPDHWAVQSPGAPGATYTNVNLRRSKGFEGFASSSDGKFIYGLL 261 Query: 261 EGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYWQYVFEQNGNAIGDFNMIDPAQG 320 EGPLWDADKKDWE+VDGKEASRILEFDV AEKFTGRYWQYVFEQNGNAIGDFNMIDPA+G Sbjct: 262 EGPLWDADKKDWERVDGKEASRILEFDVTAEKFTGRYWQYVFEQNGNAIGDFNMIDPARG 321 Query: 321 LVIERDNGEGTADKACPQGQRGENCFPDLAKFKRVYKIELSDANVGKPVRKIAHIDLMKI 380 L+IERDNGEGT+DKACPQG RG+NCFPD+AKFKRVYKIELS+ANVGKPVRKIA+IDLMKI Sbjct: 322 LIIERDNGEGTSDKACPQGTRGDNCFPDVAKFKRVYKIELSEANVGKPVRKIAYIDLMKI 381 Query: 381 RDPNKKARKPLNDGVYTFPFFTIENVDRVDETHIIVGNDNNLPFSSSRDPNKADDDEFVL 440 RDP+KKARKPLNDGV TFPFFTIENVDRVD+THIIVGNDNNLPFSSSRDPNKADD+EFVL Sbjct: 382 RDPDKKARKPLNDGVLTFPFFTIENVDRVDDTHIIVGNDNNLPFSSSRDPNKADDNEFVL 441 Query: 441 LEVGDFLKAK 450 LEVGDFLKAK Sbjct: 442 LEVGDFLKAK 451 >ref|YP_001993750.1| hypothetical protein Rpal_4785 [Rhodopseudomonas palustris TIE-1] gb|ACF03275.1| conserved hypothetical protein; putative signal peptide [Rhodopseudomonas palustris TIE-1] Length = 451 Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/451 (81%), Positives = 407/451 (90%), Gaps = 1/451 (0%) Query: 1 MRLSLLCSVASILLATSA-FAQSEGEFPATLAGHAVMPAESFIDAPADTPNDLKTSGKYT 59 MR LL SVA LATSA AQ+EGEFPATLAGHAV+PA SF+DAPAD P DLKTSGKYT Sbjct: 1 MRKLLLGSVAVFALATSAALAQTEGEFPATLAGHAVLPATSFVDAPADAPADLKTSGKYT 60 Query: 60 TGKRVDAIGTVMGKSYERPTGVSLPFKGQPLQGHSGIKVMPDGSFWVITDNGMGSRYNSA 119 TG+RV+A G+VMGKS RPTGVS+PFKGQPLQGHSGIK MPDG+FWV+TDNG GSRYNSA Sbjct: 61 TGQRVEAQGSVMGKSNGRPTGVSVPFKGQPLQGHSGIKAMPDGTFWVLTDNGFGSRYNSA 120 Query: 120 DSMLYLNRHKIDWANGKIERQETVFLHDPDRKVPFRIVHEDTAKRYLTGADFDTEGFQII 179 DSMLYL+ +KIDWA G ++R++TVFLHDPD+KVPFRIVHEDT KRYLTGADFDTEGFQII Sbjct: 121 DSMLYLDNYKIDWATGAVDRKQTVFLHDPDKKVPFRIVHEDTDKRYLTGADFDTEGFQII 180 Query: 180 NDIFWIGDEFGPYILKADKTGKILAVFETVADGKPVRSPDHWAVQSPGAPGASYTNVNLR 239 D FWIGDEFGPYI++AD TGKI+ V++++ADGKP++SPDHW+VQSPGAPGA+YT VNL+ Sbjct: 181 GDRFWIGDEFGPYIIEADLTGKIVGVYDSMADGKPIKSPDHWSVQSPGAPGATYTGVNLK 240 Query: 240 RSKGYEGFASSKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAAEKFTGRYWQ 299 RSKGYEGFA+SKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVA +KFTGR W Sbjct: 241 RSKGYEGFAASKDGKFLYGLLEGPLWDADKKDWEKVDGKEASRILEFDVAQKKFTGRSWH 300 Query: 300 YVFEQNGNAIGDFNMIDPAQGLVIERDNGEGTADKACPQGQRGENCFPDLAKFKRVYKIE 359 YVFEQNGNAIGDFNMID GLVIERDNGEGT DKACP+G+ G +CF DLAKFKRVYKIE Sbjct: 301 YVFEQNGNAIGDFNMIDATHGLVIERDNGEGTKDKACPEGKTGTDCFNDLAKFKRVYKIE 360 Query: 360 LSDANVGKPVRKIAHIDLMKIRDPNKKARKPLNDGVYTFPFFTIENVDRVDETHIIVGND 419 L+DAN GKPV KI IDLMKIRDP+KKA+KPL DGV FPFFTIENVD+VD+ HIIVGND Sbjct: 361 LTDANAGKPVNKIGFIDLMKIRDPDKKAKKPLTDGVLAFPFFTIENVDKVDDRHIIVGND 420 Query: 420 NNLPFSSSRDPNKADDDEFVLLEVGDFLKAK 450 NNLPFSSSRDPNKADD+EFVLLEV DFLKAK Sbjct: 421 NNLPFSSSRDPNKADDNEFVLLEVADFLKAK 451