BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0081.0015.p (209 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P26026.1|NODS_BRAJA RecName: Full=Nodulation protein S >gi|12... 330 1e-88 gb|AAC80568.1| NodS [Bradyrhizobium sp. SNU001] 318 4e-85 pdb|3OFJ|A Chain A, Crystal Structure Of N-Methyltransferase Nod... 289 2e-76 gb|AAK00158.1|AF222753_13 nodulation methyltransferase NodS [Bra... 288 4e-76 emb|CAH04370.1| NodS methyltransferase [Sinorhizobium sp. BR816] 285 3e-75 >sp|P26026.1|NODS_BRAJA RecName: Full=Nodulation protein S gb|AAG60999.1|AF322013_118 NodS [Bradyrhizobium japonicum] gb|AAA26227.1| nodS gene product [Bradyrhizobium japonicum] Length = 209 Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 156/209 (74%), Positives = 179/209 (85%) Query: 1 VTSDKNYQLLERELAVDDPWRLDSNSFEQERYAQMLRMSRCNGDVVHALEVGCAAGAFTE 60 +T D+N+QLLERELAVDDPWRLD+++FEQ+RYAQMLRMSR +GD ALEVGCAAGAFTE Sbjct: 1 MTQDENHQLLERELAVDDPWRLDTSAFEQQRYAQMLRMSRRDGDAASALEVGCAAGAFTE 60 Query: 61 MLAPHCQRLTVVDVMPQAIERARQRTKRWSHITWITCDIQQFSTAEQFDLIVVAEVLYYL 120 MLAP C+RLTVVDVMPQAIER R RT +WSHI+W+TCDIQ+FST EQFDLIVVAEVLYYL Sbjct: 61 MLAPLCERLTVVDVMPQAIERTRLRTGKWSHISWVTCDIQRFSTTEQFDLIVVAEVLYYL 120 Query: 121 KDIAEMHTAILNLVGMLAPNGALVFGSARDAPCRRCGHAAGAETVISLFNENLSEIERLH 180 +D+ EMH AI NLV MLAP+ L+FGSARD C+R GHAAGAETVI+LFNE+LSEIER H Sbjct: 121 RDVVEMHAAIRNLVSMLAPDETLIFGSARDEICQRWGHAAGAETVIALFNESLSEIERRH 180 Query: 181 CHTESVNEDCLLVLFRKPINSSEQPNYGH 209 C T S +EDCL+V F KP +S Q N GH Sbjct: 181 CCTGSASEDCLIVRFLKPGGASAQSNAGH 209 >gb|AAC80568.1| NodS [Bradyrhizobium sp. SNU001] Length = 208 Score = 318 bits (814), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 151/209 (72%), Positives = 178/209 (85%), Gaps = 1/209 (0%) Query: 1 VTSDKNYQLLERELAVDDPWRLDSNSFEQERYAQMLRMSRCNGDVVHALEVGCAAGAFTE 60 +T D+N+QLLERELAVDDPWRLD+++FEQ+RYAQMLRMSR +GD +LEVGCAAG FTE Sbjct: 1 MTQDENHQLLERELAVDDPWRLDTSAFEQQRYAQMLRMSRRDGDAA-SLEVGCAAGTFTE 59 Query: 61 MLAPHCQRLTVVDVMPQAIERARQRTKRWSHITWITCDIQQFSTAEQFDLIVVAEVLYYL 120 MLAP C+RLTVVDVMPQA+ER + RT +WSHI+W+TCDIQ+FST EQFDLIVVAEVLYYL Sbjct: 60 MLAPLCERLTVVDVMPQAVERTQLRTGKWSHISWVTCDIQRFSTTEQFDLIVVAEVLYYL 119 Query: 121 KDIAEMHTAILNLVGMLAPNGALVFGSARDAPCRRCGHAAGAETVISLFNENLSEIERLH 180 +D+ EMH AI +LV MLAP+ L+FGSARD C+R GHAAGAETVI+LFNE+LSEIER H Sbjct: 120 RDVVEMHAAIHSLVSMLAPDETLIFGSARDEICQRWGHAAGAETVIALFNESLSEIERRH 179 Query: 181 CHTESVNEDCLLVLFRKPINSSEQPNYGH 209 C T S +EDCL+V F KP +S Q N GH Sbjct: 180 CCTGSASEDCLIVRFLKPGGASAQSNAGH 208 >pdb|3OFJ|A Chain A, Crystal Structure Of N-Methyltransferase Nods From Bradyrhizobium Japonicum Wm9 pdb|3OFK|A Chain A, Crystal Structure Of N-Methyltransferase Nods From Bradyrhizobium Japonicum Wm9 In Complex With S-Adenosyl-L-Homocysteine (Sah) pdb|3OFK|B Chain B, Crystal Structure Of N-Methyltransferase Nods From Bradyrhizobium Japonicum Wm9 In Complex With S-Adenosyl-L-Homocysteine (Sah) pdb|3OFK|C Chain C, Crystal Structure Of N-Methyltransferase Nods From Bradyrhizobium Japonicum Wm9 In Complex With S-Adenosyl-L-Homocysteine (Sah) pdb|3OFK|D Chain D, Crystal Structure Of N-Methyltransferase Nods From Bradyrhizobium Japonicum Wm9 In Complex With S-Adenosyl-L-Homocysteine (Sah) Length = 216 Score = 289 bits (740), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 138/206 (66%), Positives = 163/206 (79%) Query: 1 VTSDKNYQLLERELAVDDPWRLDSNSFEQERYAQMLRMSRCNGDVVHALEVGCAAGAFTE 60 V+ D YQ LERELA DDPWRLD N FE+ER+ Q+LR+S +G V + LE+GCAAGAFTE Sbjct: 8 VSVDNTYQSLERELANDDPWRLDDNPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTE 67 Query: 61 MLAPHCQRLTVVDVMPQAIERARQRTKRWSHITWITCDIQQFSTAEQFDLIVVAEVLYYL 120 LAPHC+RLTV+DVMP+AI RA QRTKRWSHI+W DI QFSTAE FDLIVVAEVLYYL Sbjct: 68 KLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYYL 127 Query: 121 KDIAEMHTAILNLVGMLAPNGALVFGSARDAPCRRCGHAAGAETVISLFNENLSEIERLH 180 +D+ +M TAI N+V MLAP G LVFGSARDA CRR GH AGAETVI++ E L+E+ER+ Sbjct: 128 EDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALTEVERVQ 187 Query: 181 CHTESVNEDCLLVLFRKPINSSEQPN 206 C +S +EDCLL FR P SS +P+ Sbjct: 188 CQGQSADEDCLLARFRNPERSSIRPD 213 >gb|AAK00158.1|AF222753_13 nodulation methyltransferase NodS [Bradyrhizobium sp. WM9] Length = 209 Score = 288 bits (737), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 137/206 (66%), Positives = 163/206 (79%) Query: 1 VTSDKNYQLLERELAVDDPWRLDSNSFEQERYAQMLRMSRCNGDVVHALEVGCAAGAFTE 60 ++ D YQ LERELA DDPWRLD N FE+ER+ Q+LR+S +G V + LE+GCAAGAFTE Sbjct: 1 MSVDNTYQSLERELANDDPWRLDDNPFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTE 60 Query: 61 MLAPHCQRLTVVDVMPQAIERARQRTKRWSHITWITCDIQQFSTAEQFDLIVVAEVLYYL 120 LAPHC+RLTV+DVMP+AI RA QRTKRWSHI+W DI QFSTAE FDLIVVAEVLYYL Sbjct: 61 KLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYYL 120 Query: 121 KDIAEMHTAILNLVGMLAPNGALVFGSARDAPCRRCGHAAGAETVISLFNENLSEIERLH 180 +D+ +M TAI N+V MLAP G LVFGSARDA CRR GH AGAETVI++ E L+E+ER+ Sbjct: 121 EDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRWGHVAGAETVITILTEALTEVERVQ 180 Query: 181 CHTESVNEDCLLVLFRKPINSSEQPN 206 C +S +EDCLL FR P SS +P+ Sbjct: 181 CQGQSADEDCLLARFRNPERSSIRPD 206 >emb|CAH04370.1| NodS methyltransferase [Sinorhizobium sp. BR816] Length = 205 Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 137/202 (67%), Positives = 160/202 (79%) Query: 1 VTSDKNYQLLERELAVDDPWRLDSNSFEQERYAQMLRMSRCNGDVVHALEVGCAAGAFTE 60 +T NYQLL+RELA DDPW LD+N FE+ER+AQMLR+S +G + +ALEVGCAAGAFT Sbjct: 4 LTQIDNYQLLDRELAADDPWGLDANPFERERHAQMLRLSLAHGSITNALEVGCAAGAFTV 63 Query: 61 MLAPHCQRLTVVDVMPQAIERARQRTKRWSHITWITCDIQQFSTAEQFDLIVVAEVLYYL 120 LAPHCQRLTV+DV+PQAI RAR+R K HI+WI D+QQFS E FDLIVVAEVLYY+ Sbjct: 64 QLAPHCQRLTVIDVVPQAIARARRRMKDPPHISWIVSDVQQFSPDELFDLIVVAEVLYYV 123 Query: 121 KDIAEMHTAILNLVGMLAPNGALVFGSARDAPCRRCGHAAGAETVISLFNENLSEIERLH 180 +IAEM A+ NLV MLAP G L+FGSARDA CRR GH AGAETVI++ NE L E+ERL Sbjct: 124 GEIAEMRAAVRNLVRMLAPGGHLIFGSARDANCRRWGHVAGAETVIAILNETLIEVERLE 183 Query: 181 CHTESVNEDCLLVLFRKPINSS 202 C ESVNEDCLL FR P++ S Sbjct: 184 CRGESVNEDCLLARFRNPVSGS 205