BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0081.0008.p (164 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001238127.1| cytochrome o ubiquinol oxidase subunit I [Br... 269 9e-71 ref|YP_004142888.1| cytochrome o ubiquinol oxidase subunit I [Me... 261 2e-68 ref|YP_483863.1| cytochrome-c oxidase [Rhodopseudomonas palustri... 259 7e-68 ref|NP_766790.1| cytochrome O ubiquinol oxidase subunit I [Brady... 255 2e-66 gb|EFV84397.1| cytochrome ubiquinol oxidase subunit I [Achromoba... 254 3e-66 >ref|YP_001238127.1| cytochrome o ubiquinol oxidase subunit I [Bradyrhizobium sp. BTAi1] gb|ABQ34221.1| cytochrome bo3 quinol oxidase subunit 1 apoprotein [Bradyrhizobium sp. BTAi1] Length = 669 Score = 269 bits (688), Expect = 9e-71, Method: Compositional matrix adjust. Identities = 133/159 (83%), Positives = 143/159 (89%), Gaps = 7/159 (4%) Query: 4 DLVKMIFGRLNLEALPIHEPILVGTFAVVAIGGLALFAIVTYFWLWTYLWREWFTTVDHK 63 DL K+IFGRL LE+LP+HEPI+VGTFA+VA+GGLALF +TYF LW YLWREWFTTVDHK Sbjct: 6 DLTKLIFGRLTLESLPLHEPIIVGTFAMVALGGLALFGAITYFRLWGYLWREWFTTVDHK 65 Query: 64 RIGIMYMILGIVMLLRGFADALMMRLQQAIAF-------GAHHYDQIFTAHGVIMIFFVA 116 RIGIMYM+LGIVMLLRGFADALMMRLQQAIAF +HHYDQ+FTAHGVIMIFFVA Sbjct: 66 RIGIMYMVLGIVMLLRGFADALMMRLQQAIAFNGSEGYLNSHHYDQVFTAHGVIMIFFVA 125 Query: 117 MPLVTGLMNYVVPLQIGARDVSFPFLNNFSFWMTVGGAV 155 MPLVTGLMNYVVPLQIGARDVSFPFLNNFSFWMT GAV Sbjct: 126 MPLVTGLMNYVVPLQIGARDVSFPFLNNFSFWMTTAGAV 164 >ref|YP_004142888.1| cytochrome o ubiquinol oxidase subunit I [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV12838.1| cytochrome o ubiquinol oxidase, subunit I [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 670 Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 129/161 (80%), Positives = 144/161 (89%), Gaps = 7/161 (4%) Query: 2 NPDLVKMIFGRLNLEALPIHEPILVGTFAVVAIGGLALFAIVTYFWLWTYLWREWFTTVD 61 NP L+K IFGRL LE+LP+HEPI+V TF VVA+GG+AL +TYF LW YLWREWFT+VD Sbjct: 4 NPALLKAIFGRLTLESLPLHEPIVVATFIVVALGGIALVGALTYFKLWGYLWREWFTSVD 63 Query: 62 HKRIGIMYMILGIVMLLRGFADALMMRLQQAIAFG-------AHHYDQIFTAHGVIMIFF 114 HKRIG+MYM+LGIVMLLRGF+DA+MMRLQQA+AFG +HHYDQIFTAHGVIMIFF Sbjct: 64 HKRIGVMYMVLGIVMLLRGFSDAIMMRLQQAMAFGGSEGYLNSHHYDQIFTAHGVIMIFF 123 Query: 115 VAMPLVTGLMNYVVPLQIGARDVSFPFLNNFSFWMTVGGAV 155 VAMPLVTGLMN+VVPLQIGARDVSFPFLNNFSFWMTVGGAV Sbjct: 124 VAMPLVTGLMNFVVPLQIGARDVSFPFLNNFSFWMTVGGAV 164 >ref|YP_483863.1| cytochrome-c oxidase [Rhodopseudomonas palustris HaA2] gb|ABD04952.1| Cytochrome-c oxidase [Rhodopseudomonas palustris HaA2] Length = 669 Score = 259 bits (663), Expect = 7e-68, Method: Compositional matrix adjust. Identities = 130/161 (80%), Positives = 141/161 (87%), Gaps = 7/161 (4%) Query: 2 NPDLVKMIFGRLNLEALPIHEPILVGTFAVVAIGGLALFAIVTYFWLWTYLWREWFTTVD 61 NPD+VK IFGRL+LE+LP+HEPI+V TF VA+GG AL A +TYF LW YLWREWFTTVD Sbjct: 4 NPDIVKAIFGRLSLESLPLHEPIVVLTFVAVALGGAALVAGLTYFKLWGYLWREWFTTVD 63 Query: 62 HKRIGIMYMILGIVMLLRGFADALMMRLQQAIAF-------GAHHYDQIFTAHGVIMIFF 114 HKRIGIMYMILGIVMLLRGFADA+MMR QQA+AF AHHYDQ+FTAHGVIMIFF Sbjct: 64 HKRIGIMYMILGIVMLLRGFADAVMMRAQQAMAFNGSEGYLNAHHYDQVFTAHGVIMIFF 123 Query: 115 VAMPLVTGLMNYVVPLQIGARDVSFPFLNNFSFWMTVGGAV 155 VAMP+VTGLMNYVVPLQIGARDVSFPFLNNFSFWMT GAV Sbjct: 124 VAMPMVTGLMNYVVPLQIGARDVSFPFLNNFSFWMTTAGAV 164 >ref|NP_766790.1| cytochrome O ubiquinol oxidase subunit I [Bradyrhizobium japonicum USDA 110] dbj|BAC45415.1| cytochrome O ubiquinol oxidase subunit I [Bradyrhizobium japonicum USDA 110] Length = 665 Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 134/162 (82%), Positives = 144/162 (88%), Gaps = 7/162 (4%) Query: 1 MNPDLVKMIFGRLNLEALPIHEPILVGTFAVVAIGGLALFAIVTYFWLWTYLWREWFTTV 60 M+PDL+K+IFGRL LE+LP+HEPI+VGTF VVA+GG L +TYF LW YLWREWFTTV Sbjct: 1 MSPDLLKLIFGRLGLESLPLHEPIVVGTFVVVALGGATLLGGLTYFRLWGYLWREWFTTV 60 Query: 61 DHKRIGIMYMILGIVMLLRGFADALMMRLQQAIAFG-------AHHYDQIFTAHGVIMIF 113 DHKRIGIMYMILGIVMLLRGFADALMMR QQ +AFG AHHYDQ+FTAHGVIMIF Sbjct: 61 DHKRIGIMYMILGIVMLLRGFADALMMRGQQMLAFGGSEGYLNAHHYDQVFTAHGVIMIF 120 Query: 114 FVAMPLVTGLMNYVVPLQIGARDVSFPFLNNFSFWMTVGGAV 155 FVAMPLVTGLMNYVVPLQIGARDVSFPFLNNFSFWMTVGGAV Sbjct: 121 FVAMPLVTGLMNYVVPLQIGARDVSFPFLNNFSFWMTVGGAV 162 >gb|EFV84397.1| cytochrome ubiquinol oxidase subunit I [Achromobacter xylosoxidans C54] Length = 667 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 123/161 (76%), Positives = 139/161 (86%), Gaps = 7/161 (4%) Query: 2 NPDLVKMIFGRLNLEALPIHEPILVGTFAVVAIGGLALFAIVTYFWLWTYLWREWFTTVD 61 PDL K+IFGRL +A+P+HEPIL+ TFA+VAIGG+AL +TY+ W YLW EWFT++D Sbjct: 4 QPDLTKLIFGRLTWDAIPLHEPILLATFAMVAIGGIALLGAITYYRKWGYLWHEWFTSID 63 Query: 62 HKRIGIMYMILGIVMLLRGFADALMMRLQQAIAFG-------AHHYDQIFTAHGVIMIFF 114 HK+IGIMYMILG+VMLLRGFADA+MMRLQQA+AFG HHYDQIFTAHGVIMIFF Sbjct: 64 HKKIGIMYMILGLVMLLRGFADAIMMRLQQAVAFGDSTGYLPPHHYDQIFTAHGVIMIFF 123 Query: 115 VAMPLVTGLMNYVVPLQIGARDVSFPFLNNFSFWMTVGGAV 155 VAMPLVTGLMNYVVPLQIGARDV+FPFLNNFSFWMT GG V Sbjct: 124 VAMPLVTGLMNYVVPLQIGARDVAFPFLNNFSFWMTTGGVV 164