BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0081.0001.p (247 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766785.1| hypothetical protein blr0145 [Bradyrhizobium ja... 317 1e-84 ref|YP_575859.1| nuclease (SNase-like) [Nitrobacter hamburgensis... 287 1e-75 ref|ZP_01044762.1| nuclease (SNase-like) [Nitrobacter sp. Nb-311... 269 3e-70 ref|YP_001243296.1| hypothetical protein BBta_7541 [Bradyrhizobi... 269 3e-70 ref|YP_001202815.1| hypothetical protein BRADO0644 [Bradyrhizobi... 266 3e-69 >ref|NP_766785.1| hypothetical protein blr0145 [Bradyrhizobium japonicum USDA 110] dbj|BAC45410.1| blr0145 [Bradyrhizobium japonicum USDA 110] Length = 353 Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 160/233 (68%), Positives = 185/233 (79%), Gaps = 2/233 (0%) Query: 15 AEATGCNFEIQGEGRVAAVVDTRSLRLDDGREVKLAGIEVADKTKATAALTALLVGREVT 74 A A C FE QG+GRVAA+VD RS+RLDDGRE++L GIE TK AL +LLVGR+VT Sbjct: 116 AFAAPCQFESQGDGRVAAIVDARSVRLDDGREIRLTGIEPTATTKQ--ALASLLVGRDVT 173 Query: 75 LRGQDDTPDRYGRQPAYAFLEGSEKPVQSELLRQGLALASSEVADKDCATALMAAEAEAR 134 LR DDTPDRYGRQ F+ S+ PVQ+ LL QG A+ S+E+ADKDCA ALM++EAEAR Sbjct: 174 LRSADDTPDRYGRQGGLIFIGDSDTPVQAMLLAQGDAIVSAEIADKDCAAALMSSEAEAR 233 Query: 135 AARSGTWAEATVIKNAESPDDILAGIGRFTVVEGRVLSVRQAGATTYLNFGRNWTRDFAV 194 + G WA+ + IKNAESPDDILAGIGRF VVEG+VLSVRQAGA TYLNFGRNWTR FAV Sbjct: 234 RQKKGNWADPSAIKNAESPDDILAGIGRFVVVEGKVLSVRQAGAMTYLNFGRNWTRGFAV 293 Query: 195 TISRRIVPAFEAAGLAPKSLENRKIRVRGWVEARRGPRIELLRVGQLEVLGGN 247 TISRR PAFE AG+A KSLENR+IRVRGWVE GPRI++ VGQ+E+LG N Sbjct: 294 TISRRASPAFETAGIALKSLENRRIRVRGWVEGNTGPRIDVRLVGQVELLGAN 346 >ref|YP_575859.1| nuclease (SNase-like) [Nitrobacter hamburgensis X14] gb|ABE61399.1| nuclease (SNase-like) [Nitrobacter hamburgensis X14] Length = 273 Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 153/249 (61%), Positives = 187/249 (75%), Gaps = 4/249 (1%) Query: 1 MTACALATGTCIGRAE---ATGCNFEIQGEGRVAAVVDTRSLRLDDGREVKLAGIEV-AD 56 A AL G G A A GC F IQG G V+AV+D R+LRLDDGR+V+LAG+EV A+ Sbjct: 24 FAAVALLCGLSFGGAAPSIAAGCQFAIQGAGVVSAVIDARTLRLDDGRDVRLAGVEVVAE 83 Query: 57 KTKATAALTALLVGREVTLRGQDDTPDRYGRQPAYAFLEGSEKPVQSELLRQGLALASSE 116 + + A A L+GR V LRG+ D PDRYGRQ A+ +L+ S VQSELL +G ALAS++ Sbjct: 84 DSHDSLAALAALIGRHVILRGERDDPDRYGRQSAFIYLDASASSVQSELLGRGEALASAD 143 Query: 117 VADKDCATALMAAEAEARAARSGTWAEATVIKNAESPDDILAGIGRFTVVEGRVLSVRQA 176 VADK CA L AEA AR R GTWA + V+KNA++PDDIL IG+F VVEG+VLSVRQA Sbjct: 144 VADKACAAELATAEAAARQTRRGTWASSVVVKNADNPDDILTRIGQFAVVEGKVLSVRQA 203 Query: 177 GATTYLNFGRNWTRDFAVTISRRIVPAFEAAGLAPKSLENRKIRVRGWVEARRGPRIELL 236 G T Y+NFGR WTRDFA TISRR++P+FEAAG+ P S ENR++RVRGWV+ R GPRIE+L Sbjct: 204 GGTFYVNFGRRWTRDFAATISRRMMPSFEAAGVVPASFENRRVRVRGWVQRRGGPRIEVL 263 Query: 237 RVGQLEVLG 245 RVGQ+EV+G Sbjct: 264 RVGQIEVVG 272 >ref|ZP_01044762.1| nuclease (SNase-like) [Nitrobacter sp. Nb-311A] gb|EAQ37543.1| nuclease (SNase-like) [Nitrobacter sp. Nb-311A] Length = 253 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 145/234 (61%), Positives = 177/234 (75%), Gaps = 9/234 (3%) Query: 15 AEATGCNFEIQGEGRVAAVVDTRSLRLDDGREVKLAGIEV-----ADKTKATAALTALLV 69 A A GC IQGEG V+AV+D R+LRL+DGR+++LAG+EV A++ A AAL + Sbjct: 21 ALADGCQLVIQGEGVVSAVIDQRTLRLEDGRDIRLAGVEVVAGEPANRRPALAAL----I 76 Query: 70 GREVTLRGQDDTPDRYGRQPAYAFLEGSEKPVQSELLRQGLALASSEVADKDCATALMAA 129 GR VTLRG+ D PDRYGRQ A+ +L S VQS+LL +G AL S+EV+DK CA L AA Sbjct: 77 GRRVTLRGERDDPDRYGRQTAFIYLGTSTSSVQSDLLARGEALVSAEVSDKSCAAELAAA 136 Query: 130 EAEARAARSGTWAEATVIKNAESPDDILAGIGRFTVVEGRVLSVRQAGATTYLNFGRNWT 189 EA AR R GTWAE++V+K+AE PDDILA IG+F +VEG V SVR G T YLNFG WT Sbjct: 137 EAAARQTRRGTWAESSVVKSAERPDDILARIGQFAIVEGYVRSVRAVGGTIYLNFGPRWT 196 Query: 190 RDFAVTISRRIVPAFEAAGLAPKSLENRKIRVRGWVEARRGPRIELLRVGQLEV 243 RDFA TISRRI+P+FEAAG+AP S E R+IRVRGW+E R GPR+E+LRVGQ+EV Sbjct: 197 RDFAATISRRIMPSFEAAGIAPMSFEQRRIRVRGWIERRGGPRVEVLRVGQIEV 250 >ref|YP_001243296.1| hypothetical protein BBta_7541 [Bradyrhizobium sp. BTAi1] gb|ABQ39390.1| hypothetical protein BBta_7541 [Bradyrhizobium sp. BTAi1] Length = 240 Score = 269 bits (687), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 139/233 (59%), Positives = 166/233 (71%), Gaps = 2/233 (0%) Query: 17 ATGCNFEIQGEGRVAAVVDTRSLRLDDGREVKLAGIEVADKTKATAALTALLV--GREVT 74 A C F GEGRV +VD RS RL DGREV+LAGIE A A T + R+V Sbjct: 8 AAPCMFATLGEGRVTEIVDARSFRLADGREVRLAGIEPPPDNAAAAVATLGALLRDRDVV 67 Query: 75 LRGQDDTPDRYGRQPAYAFLEGSEKPVQSELLRQGLALASSEVADKDCATALMAAEAEAR 134 LRG+DD PDRYGRQ A+AFL G E+ VQ ELL +G L ++V D+DCA L+AAEA+AR Sbjct: 68 LRGEDDAPDRYGRQRAFAFLAGEERTVQGELLARGSVLRGTDVQDRDCALTLVAAEADAR 127 Query: 135 AARSGTWAEATVIKNAESPDDILAGIGRFTVVEGRVLSVRQAGATTYLNFGRNWTRDFAV 194 A G W TVIKNAESPDDILA G FTVVEG+VLSVRQ G TTYLNF RNWTR FAV Sbjct: 128 IASRGLWTSPTVIKNAESPDDILARAGLFTVVEGKVLSVRQTGTTTYLNFARNWTRGFAV 187 Query: 195 TISRRIVPAFEAAGLAPKSLENRKIRVRGWVEARRGPRIELLRVGQLEVLGGN 247 I +R++P E AG+ KSL NR++RVRGW+EA +GPR+EL ++ Q+E+L GN Sbjct: 188 IIPKRMMPVMEGAGIDTKSLANRRVRVRGWIEAHQGPRLELTQIAQIEMLSGN 240 >ref|YP_001202815.1| hypothetical protein BRADO0644 [Bradyrhizobium sp. ORS 278] emb|CAL74575.1| Conserved hypothetical protein; putative Staphylococcus nuclease (SNase-like) [Bradyrhizobium sp. ORS 278] Length = 241 Score = 266 bits (679), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 140/231 (60%), Positives = 171/231 (74%), Gaps = 3/231 (1%) Query: 20 CNFEIQGEGRVAAVVDTRSLRLDDGREVKLAGIEVA---DKTKATAALTALLVGREVTLR 76 C F G+G V+ +VD RS+RL DGRE++LAGIE + AT AL ALL R++ LR Sbjct: 11 CTFAELGDGHVSEIVDARSVRLSDGREIRLAGIEAPAPEHRAAATDALVALLRDRDIVLR 70 Query: 77 GQDDTPDRYGRQPAYAFLEGSEKPVQSELLRQGLALASSEVADKDCATALMAAEAEARAA 136 G DD PDRYGRQ A+AF+ G+++ QSELLRQG L ++ D+DCA +L AAE EARAA Sbjct: 71 GDDDAPDRYGRQRAFAFVAGADQSAQSELLRQGAVLRGIDLPDRDCALSLAAAETEARAA 130 Query: 137 RSGTWAEATVIKNAESPDDILAGIGRFTVVEGRVLSVRQAGATTYLNFGRNWTRDFAVTI 196 R G W TVIKNAESPDDILAG+G FTVVEG+VLSVRQAG TTYLNF RNWTR FAV I Sbjct: 131 RRGLWNMGTVIKNAESPDDILAGVGLFTVVEGKVLSVRQAGTTTYLNFARNWTRGFAVII 190 Query: 197 SRRIVPAFEAAGLAPKSLENRKIRVRGWVEARRGPRIELLRVGQLEVLGGN 247 +R++ E AG+ KSL NR++RVRGW+EA GPR+EL + Q+E+L GN Sbjct: 191 PKRMMAVLEGAGIDVKSLANRQVRVRGWIEAHAGPRLELTQSAQIEILSGN 241