BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0080.0077.p         (148 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001220560.1| Type IV secretory pathway AvhB8 protein [Bra...   293   7e-78
ref|ZP_04681630.1| Type IV secretion system protein virB8 [Ochro...   209   1e-52
ref|YP_001985523.1| transport secretion system IV protein, VirB8...   204   4e-51
ref|NP_659887.2| transport secretion system IV, VirB8 protein [R...   203   6e-51
ref|NP_396099.1| type IV secretion protein AvhB8 [Agrobacterium ...   203   8e-51

>ref|YP_001220560.1| Type IV secretory pathway AvhB8 protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ39888.1| Type IV secretory pathway AvhB8 protein [Bradyrhizobium sp. BTAi1]
          Length = 223

 Score =  293 bits (750), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 142/148 (95%), Positives = 145/148 (97%)

Query: 1   VSALNSTPARYDEAVTKYFLGRYVRAREGYSYPEAETNFRTISLLSGQGEQARFAAWYRG 60
           VSAL STPARYDEAVTKYFLGRYVRAREGYSYPEAETNFRTISLLSGQGEQARFAAWYRG
Sbjct: 76  VSALTSTPARYDEAVTKYFLGRYVRAREGYSYPEAETNFRTISLLSGQGEQARFAAWYRG 135

Query: 61  SNPESPQVVQGRFGVATVRIKAISLLADNVASVRFMKEARKGEETHVTHWVSTLTFSYAN 120
           SNPESPQVVQGRFGVATVRIKAISLLADNVASVRFMKE+RKGEET +THWVSTLTFSY N
Sbjct: 136 SNPESPQVVQGRFGVATVRIKAISLLADNVASVRFMKESRKGEETRITHWVSTLTFSYTN 195

Query: 121 APMSSADRLINPLGFLVSEYRADPEVVP 148
           APMSSADRLINPLGF+VSEYRADPEVVP
Sbjct: 196 APMSSADRLINPLGFVVSEYRADPEVVP 223


>ref|ZP_04681630.1| Type IV secretion system protein virB8 [Ochrobactrum intermedium
           LMG 3301]
 gb|EEQ92934.1| Type IV secretion system protein virB8 [Ochrobactrum intermedium
           LMG 3301]
          Length = 223

 Score =  209 bits (531), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 95/147 (64%), Positives = 117/147 (79%)

Query: 1   VSALNSTPARYDEAVTKYFLGRYVRAREGYSYPEAETNFRTISLLSGQGEQARFAAWYRG 60
           VSAL ST   YDEAVTKYF  RYVRAREGY + EA+TNFRT++LLS Q EQ RFA+ YRG
Sbjct: 76  VSALTSTAGTYDEAVTKYFAARYVRAREGYVWSEAQTNFRTVALLSTQAEQDRFASHYRG 135

Query: 61  SNPESPQVVQGRFGVATVRIKAISLLADNVASVRFMKEARKGEETHVTHWVSTLTFSYAN 120
           SNP+SPQV+ GR     +RI +ISL+  NVASVR+M+   +G+E   THW+++LT++YAN
Sbjct: 136 SNPDSPQVIYGRAATTKIRIASISLINQNVASVRYMRTVTRGDEVRTTHWIASLTYAYAN 195

Query: 121 APMSSADRLINPLGFLVSEYRADPEVV 147
           APMSS DRL+NPLGF VSEYR+DPE +
Sbjct: 196 APMSSTDRLVNPLGFAVSEYRSDPEAI 222


>ref|YP_001985523.1| transport secretion system IV protein, VirB8 [Rhizobium etli CIAT
           652]
 gb|ACE94973.1| transport secretion system IV protein, VirB8 [Rhizobium etli CIAT
           652]
          Length = 223

 Score =  204 bits (519), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 97/147 (65%), Positives = 115/147 (78%)

Query: 1   VSALNSTPARYDEAVTKYFLGRYVRAREGYSYPEAETNFRTISLLSGQGEQARFAAWYRG 60
           VSAL ST   YDEAVTKYF  +YVRAREGY + E E NFRT++LLS Q EQ RF+A YRG
Sbjct: 76  VSALTSTAGTYDEAVTKYFAAKYVRAREGYVWSEGEENFRTVALLSTQPEQTRFSALYRG 135

Query: 61  SNPESPQVVQGRFGVATVRIKAISLLADNVASVRFMKEARKGEETHVTHWVSTLTFSYAN 120
           SNP+SPQ + GR   + + I +ISL+  NVASVR+M+   +G+E   THWV+TLTFSYAN
Sbjct: 136 SNPDSPQNIYGRSATSRINIVSISLINANVASVRYMRTVTRGDEVRTTHWVATLTFSYAN 195

Query: 121 APMSSADRLINPLGFLVSEYRADPEVV 147
           APMSS DRLINPLGF+VSEYRADPE +
Sbjct: 196 APMSSTDRLINPLGFVVSEYRADPEAI 222


>ref|NP_659887.2| transport secretion system IV, VirB8 protein [Rhizobium etli CFN
           42]
 gb|AAM54900.2| transport secretion system IV, VirB8 protein [Rhizobium etli CFN
           42]
          Length = 223

 Score =  203 bits (517), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 97/147 (65%), Positives = 114/147 (77%)

Query: 1   VSALNSTPARYDEAVTKYFLGRYVRAREGYSYPEAETNFRTISLLSGQGEQARFAAWYRG 60
           VSAL ST   YDEAVTKYF  +YVRAREGY + E E NFRT++LLS Q EQ RFAA YRG
Sbjct: 76  VSALTSTAGTYDEAVTKYFAAKYVRAREGYVWSEGEENFRTVALLSTQPEQTRFAAVYRG 135

Query: 61  SNPESPQVVQGRFGVATVRIKAISLLADNVASVRFMKEARKGEETHVTHWVSTLTFSYAN 120
           SNP+SPQ + GR   + + I +ISL+  NVASVR+M+   +G+E   THWV+TLTFSYAN
Sbjct: 136 SNPDSPQNIYGRSATSRINIVSISLINANVASVRYMRTVTRGDEVRTTHWVATLTFSYAN 195

Query: 121 APMSSADRLINPLGFLVSEYRADPEVV 147
           APMSS DRL NPLGF+VSEYRADPE +
Sbjct: 196 APMSSTDRLTNPLGFVVSEYRADPETI 222


>ref|NP_396099.1| type IV secretion protein AvhB8 [Agrobacterium tumefaciens str.
           C58]
 gb|AAL04066.1|AF396671_7 AvhB8 [Agrobacterium tumefaciens]
 gb|AAK90540.1| type IV secretion protein AvhB8 [Agrobacterium tumefaciens str.
           C58]
          Length = 223

 Score =  203 bits (516), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 97/147 (65%), Positives = 114/147 (77%)

Query: 1   VSALNSTPARYDEAVTKYFLGRYVRAREGYSYPEAETNFRTISLLSGQGEQARFAAWYRG 60
           VSAL ST   YDEAVTKYF  +YVRAREGY + EA+ NFRTI+LLS Q EQ RFAA YRG
Sbjct: 76  VSALTSTAGTYDEAVTKYFAAKYVRAREGYVWSEAQENFRTIALLSTQAEQTRFAALYRG 135

Query: 61  SNPESPQVVQGRFGVATVRIKAISLLADNVASVRFMKEARKGEETHVTHWVSTLTFSYAN 120
           SNP+SPQ   GR   A + I +ISL+  NV SVR+M+   +GEE   THWV+++T+SYAN
Sbjct: 136 SNPQSPQNTYGRGATARIDIASISLINQNVVSVRYMRTITRGEEVRTTHWVASITYSYAN 195

Query: 121 APMSSADRLINPLGFLVSEYRADPEVV 147
           APMSS DRL+NPLGF+VSEYRADPE V
Sbjct: 196 APMSSTDRLVNPLGFVVSEYRADPEEV 222