BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0080.0041.p         (115 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001220378.1| hypothetical protein BBta_p0007 [Bradyrhizob...   230   6e-59
ref|YP_001220587.1| hypothetical protein BBta_p0280 [Bradyrhizob...   210   7e-53
ref|YP_003068147.1| hypothetical protein METDI2615 [Methylobacte...   196   9e-49
ref|YP_665943.1| hypothetical protein Meso_4326 [Mesorhizobium s...   189   1e-46
ref|NP_066683.1| hypothetical protein pRi1724_p103 [Agrobacteriu...   185   2e-45

>ref|YP_001220378.1| hypothetical protein BBta_p0007 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39706.1| hypothetical protein BBta_p0007 [Bradyrhizobium sp. BTAi1]
          Length = 192

 Score =  230 bits (586), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 110/115 (95%), Positives = 113/115 (98%)

Query: 1   MGAARENQGNETMATIGTFTSTGNGFSGAIKTLNLNVKAKLIRVENPSDKGPHFRIYSGN 60
           +GAARENQG ETMATIGTFTSTGNGFSGAIKTLNLNVKAKLIRV+NPSDKGPHFRIYSGN
Sbjct: 78  IGAARENQGYETMATIGTFTSTGNGFSGAIKTLNLNVKAKLIRVDNPSDKGPHFRIYSGN 137

Query: 61  VELGAAWQKTAKDTERDYLSVKLDDPSFPAPIYATLAEVEGAEGLQLIWSRPNRD 115
           VELGAAWQKTAKDTERDYLSVKLDDPSFPAPIYATL EVEGAEG+QLIWSRPNRD
Sbjct: 138 VELGAAWQKTAKDTERDYLSVKLDDPSFPAPIYATLIEVEGAEGVQLIWSRPNRD 192


>ref|YP_001220587.1| hypothetical protein BBta_p0280 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39915.1| hypothetical protein BBta_p0280 [Bradyrhizobium sp. BTAi1]
          Length = 115

 Score =  210 bits (534), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 97/115 (84%), Positives = 107/115 (93%)

Query: 1   MGAARENQGNETMATIGTFTSTGNGFSGAIKTLNLNVKAKLIRVENPSDKGPHFRIYSGN 60
           MGAARE + + TMATIGTFTSTGNGF+G ++TL LN KAKL+RVENPSDKGPHFRI++GN
Sbjct: 1   MGAARETEKDTTMATIGTFTSTGNGFTGTVRTLALNAKAKLVRVENPSDKGPHFRIFAGN 60

Query: 61  VELGAAWQKTAKDTERDYLSVKLDDPSFPAPIYATLAEVEGAEGLQLIWSRPNRD 115
           VELGAAWQKTA+DTERDYLSVKLDDPSFPAPIYATL EVEG EGLQLIWSRP+RD
Sbjct: 61  VELGAAWQKTARDTERDYLSVKLDDPSFPAPIYATLIEVEGQEGLQLIWSRPSRD 115


>ref|YP_003068147.1| hypothetical protein METDI2615 [Methylobacterium extorquens DM4]
 emb|CAX24272.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 103

 Score =  196 bits (498), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 91/103 (88%), Positives = 97/103 (94%)

Query: 13  MATIGTFTSTGNGFSGAIKTLNLNVKAKLIRVENPSDKGPHFRIYSGNVELGAAWQKTAK 72
           MATIGTFTS GNGF+G ++TL LN KAKL+RVENPSDKGPHFRI++GNVELGAAWQKTAK
Sbjct: 1   MATIGTFTSNGNGFTGTVRTLALNAKAKLVRVENPSDKGPHFRIFAGNVELGAAWQKTAK 60

Query: 73  DTERDYLSVKLDDPSFPAPIYATLAEVEGAEGLQLIWSRPNRD 115
           DTERDYLSVKLDDPSFPAPIYATL EVEG EGLQLIWSRPNRD
Sbjct: 61  DTERDYLSVKLDDPSFPAPIYATLIEVEGQEGLQLIWSRPNRD 103


>ref|YP_665943.1| hypothetical protein Meso_4326 [Mesorhizobium sp. BNC1]
 gb|ABG61296.1| protein of unknown function DUF736 [Chelativorans sp. BNC1]
          Length = 102

 Score =  189 bits (480), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 90/103 (87%), Positives = 96/103 (93%), Gaps = 1/103 (0%)

Query: 13  MATIGTFTSTGNGFSGAIKTLNLNVKAKLIRVENPSDKGPHFRIYSGNVELGAAWQKTAK 72
           MATIGTF STGNGFSG+IKTLNLNVKAKL+R+ENPSDKGPHFRI+SGNVELGAAWQK + 
Sbjct: 1   MATIGTFASTGNGFSGSIKTLNLNVKAKLVRIENPSDKGPHFRIFSGNVELGAAWQKVSA 60

Query: 73  DTERDYLSVKLDDPSFPAPIYATLAEVEGAEGLQLIWSRPNRD 115
           +  RDYLSVKLDDPSFPAPIYATL EVEG EGLQLIWSRPNRD
Sbjct: 61  EG-RDYLSVKLDDPSFPAPIYATLIEVEGEEGLQLIWSRPNRD 102


>ref|NP_066683.1| hypothetical protein pRi1724_p103 [Agrobacterium rhizogenes]
 ref|NP_066685.1| hypothetical protein pRi1724_p105 [Agrobacterium rhizogenes]
 dbj|BAB16221.1| riorf102 [Agrobacterium rhizogenes]
 dbj|BAB16223.1| riorf104 [Agrobacterium rhizogenes]
          Length = 104

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 89/104 (85%), Positives = 97/104 (93%), Gaps = 1/104 (0%)

Query: 12  TMATIGTFTSTGNGFSGAIKTLNLNVKAKLIRVENPSDKGPHFRIYSGNVELGAAWQKTA 71
           TMATIGTFTST NGFSG+I+TL LNVKA++ RVENPSDKGPHFRIY+GNVELGAAWQKT+
Sbjct: 2   TMATIGTFTSTENGFSGSIRTLALNVKARIARVENPSDKGPHFRIYAGNVELGAAWQKTS 61

Query: 72  KDTERDYLSVKLDDPSFPAPIYATLAEVEGAEGLQLIWSRPNRD 115
           +   RDYLSVKLDDPSFPAPIYATLAEVEG +GLQLIWSRPNRD
Sbjct: 62  EQG-RDYLSVKLDDPSFPAPIYATLAEVEGEDGLQLIWSRPNRD 104