BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0080.0040.p         (58 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001220379.1| hypothetical protein BBta_p0008 [Bradyrhizob...    68   4e-10
gb|EGP54212.1| hypothetical protein Agau_P200516 [Agrobacterium ...    42   0.037
ref|YP_004280393.1| hypothetical protein AGROH133_14645 [Agrobac...    40   0.100
ref|YP_001967588.1| orf_Bo192 [Agrobacterium tumefaciens] >gi|71...    40   0.11 

>ref|YP_001220379.1| hypothetical protein BBta_p0008 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39707.1| hypothetical protein BBta_p0008 [Bradyrhizobium sp. BTAi1]
          Length = 47

 Score = 68.2 bits (165), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 31/47 (65%), Positives = 40/47 (85%)

Query: 1  MTVDTIEELRAELRDCLFSPGERKALEAQLAELIRQRNQPITSGDAS 47
          MTVDTIEELRAELR+C+F P ERKALE +LAELIRQR++ + + + +
Sbjct: 1  MTVDTIEELRAELRECVFMPAERKALEVELAELIRQRDEALAAEEGA 47


>gb|EGP54212.1| hypothetical protein Agau_P200516 [Agrobacterium tumefaciens F2]
          Length = 77

 Score = 41.6 bits (96), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 21/35 (60%), Positives = 24/35 (68%)

Query: 2  TVDTIEELRAELRDCLFSPGERKALEAQLAELIRQ 36
          T+D I ELRAELR C F+  ER   EA+LA LI Q
Sbjct: 23 TLDQINELRAELRSCYFTKTERAMAEAELATLIAQ 57


>ref|YP_004280393.1| hypothetical protein AGROH133_14645 [Agrobacterium sp. H13-3]
 gb|ADY68015.1| hypothetical protein AGROH133_14645 [Agrobacterium sp. H13-3]
          Length = 57

 Score = 40.4 bits (93), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 23/33 (69%)

Query: 2  TVDTIEELRAELRDCLFSPGERKALEAQLAELI 34
          T+D I ELRAELR C F+  ER   EA+LA L+
Sbjct: 3  TLDQINELRAELRSCYFTKTERAMAEAELATLV 35


>ref|YP_001967588.1| orf_Bo192 [Agrobacterium tumefaciens]
 gb|AAZ50575.1| orf_Bo192 [Agrobacterium tumefaciens]
          Length = 107

 Score = 40.0 bits (92), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 23/33 (69%)

Query: 2  TVDTIEELRAELRDCLFSPGERKALEAQLAELI 34
          T+D I ELRAELR C F+  ER   EA+LA L+
Sbjct: 53 TLDQINELRAELRSCYFTKTERAMAEAELATLV 85