BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0080.0033.p (331 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01048565.1| hypothetical protein NB311A_09821 [Nitrobacte... 256 5e-66 gb|EGW94425.1| hypothetical protein EC30301_0312 [Escherichia co... 191 1e-46 ref|ZP_06157041.1| hypothetical protein VDA_000502 [Photobacteri... 187 2e-45 ref|ZP_08649097.1| hypothetical protein imdm_2309 [gamma proteob... 150 3e-34 ref|YP_004075579.1| phytoene dehydrogenase-like oxidoreductase [... 40 0.66 >ref|ZP_01048565.1| hypothetical protein NB311A_09821 [Nitrobacter sp. Nb-311A] gb|EAQ33470.1| hypothetical protein NB311A_09821 [Nitrobacter sp. Nb-311A] Length = 292 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 144/298 (48%), Positives = 186/298 (62%), Gaps = 14/298 (4%) Query: 41 MRALAILVADLNVDFATGRTFYTRVQARSVPDRELNTVCEQLLFVLNQIAALRALTSAPN 100 MRAL++L+AD V+F ++FY RS+ NT+ EQL L+ ++AL + A Sbjct: 1 MRALSLLIADKGVNFTAAKSFYASQGKRSMDAWVENTILEQLFLGLHHLSALEKMKDAKT 60 Query: 101 KADVARTAIVAWYYGVYSAASAMTAAMDGSFQDNHTETARKWQD-------AFPPIAWQC 153 ADVAR I+AWYYGV +AASAMTAA +GSFQ++H TA W A P +W Sbjct: 61 SADVARVGILAWYYGVANAASAMTAAQNGSFQEDHAGTANMWDREIAARGLAMEPFSW-- 118 Query: 154 RRSPTVCRACFRPPPDAELVPIRARGRHSLVSTPSTAQEAWGCCAEYLSGTAGWERWNVE 213 R ++ + F P E+ R +L+S+ +TA EA G AEYLSG+A W W E Sbjct: 119 -RVSSLVKTTFLP----EVKAYRGGSAGTLLSSLTTASEALGAAAEYLSGSAAWYAWKTE 173 Query: 214 ERVRETGAFKALGVSDFRKKAARDLRDAGYARRGIGFLHQASRYRGKANYRDAIFLAYGT 273 E VR++ FK LGV+DFR KAAR LRD +RR GF+HQASRYRGKANYR+A+FLAYG Sbjct: 174 EDVRKSPDFKNLGVNDFRTKAARVLRDERLSRRSTGFVHQASRYRGKANYREALFLAYGK 233 Query: 274 SVPTQLSGFVDDMLAVLQAFAAMAGAYCSLRVGKAAWTDFVDDLDRKKAISVSPGDVW 331 S T L GFV + VL+AF AMAGA+ S ++GK W +FV D+D +A S S VW Sbjct: 234 STETILKGFVTEQALVLRAFLAMAGAFSSRKLGKVLWDEFVTDVDANRAFSTSAAGVW 291 >gb|EGW94425.1| hypothetical protein EC30301_0312 [Escherichia coli 3030-1] Length = 321 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 115/304 (37%), Positives = 164/304 (53%), Gaps = 3/304 (0%) Query: 26 DVPDARFALPSTIHWMRALAILVADLNVDFATGRTFYTRVQARSVPDRELNT-VCEQLLF 84 D + RFA T++WMRALA +V Y RVQ R V +RE +T V E + Sbjct: 14 DQAEPRFAFQGTVNWMRALAEVVNGGACADDKLNDLYARVQRRPV-NREADTLVFENTMM 72 Query: 85 VLNQIAALRALTS-APNKADVARTAIVAWYYGVYSAASAMTAAMDGSFQDNHTETARKWQ 143 L+ +++L+++ +K D+ R+AI++WYY +Y +ASAM AA GS Q+ HT TA+ WQ Sbjct: 73 ALHNLSSLKSMNKDVEDKYDICRSAIISWYYSIYFSASAMVAASSGSIQETHTATAKVWQ 132 Query: 144 DAFPPIAWQCRRSPTVCRACFRPPPDAELVPIRARGRHSLVSTPSTAQEAWGCCAEYLSG 203 + + DAE+ R R L + + A G YL G Sbjct: 133 SDIAEKELIPYPFNLLLTSLVSNTADAEIAAYRGANRFDLNNRAYDNETAHGALVSYLKG 192 Query: 204 TAGWERWNVEERVRETGAFKALGVSDFRKKAARDLRDAGYARRGIGFLHQASRYRGKANY 263 T G+++W EERVR + FKALGV +FR KAAR++RD + + FL QA RYRGKANY Sbjct: 193 THGYKKWETEERVRTSRDFKALGVDNFRTKAAREVRDHALEKGQVNFLIQAFRYRGKANY 252 Query: 264 RDAIFLAYGTSVPTQLSGFVDDMLAVLQAFAAMAGAYCSLRVGKAAWTDFVDDLDRKKAI 323 RD+IFL+YG + + F+ D+ V F YCS RV + W +FV+D+ + Sbjct: 253 RDSIFLSYGDNNEAIIEEFIQDLYDVAIGFIRATSHYCSRRVERGTWAEFVEDISDNSRL 312 Query: 324 SVSP 327 S+ Sbjct: 313 SIDS 316 >ref|ZP_06157041.1| hypothetical protein VDA_000502 [Photobacterium damselae subsp. damselae CIP 102761] gb|EEZ39482.1| hypothetical protein VDA_000502 [Photobacterium damselae subsp. damselae CIP 102761] Length = 293 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 113/289 (39%), Positives = 160/289 (55%), Gaps = 3/289 (1%) Query: 41 MRALAILVADLNVDFATGRTFYTRVQARSVPDRELNT-VCEQLLFVLNQIAALRALT-SA 98 MRALA +V D Y RVQ R V +RE +T V E + L+ +++L+++ +A Sbjct: 1 MRALAEVVNDGVCADDKLSDLYARVQRRPV-NREADTLVFENTMMALHNLSSLKSMNENA 59 Query: 99 PNKADVARTAIVAWYYGVYSAASAMTAAMDGSFQDNHTETARKWQDAFPPIAWQCRRSPT 158 +K D+ R+AI++WYY +Y +ASAM AA GS Q+ HT TA+ WQ Sbjct: 60 RDKYDICRSAIISWYYSIYFSASAMVAASSGSIQETHTATAKVWQSDIAEKELIPYPFNL 119 Query: 159 VCRACFRPPPDAELVPIRARGRHSLVSTPSTAQEAWGCCAEYLSGTAGWERWNVEERVRE 218 + + DAE+ R R+ L + A G YL GT G+++W EERVR Sbjct: 120 LLTSLVSKTADAEITAYRGSNRYDLNDRAYDNETAHGALVSYLKGTHGYKKWETEERVRT 179 Query: 219 TGAFKALGVSDFRKKAARDLRDAGYARRGIGFLHQASRYRGKANYRDAIFLAYGTSVPTQ 278 + FKALGV +FR KAAR++RD + + FL QA RYRGKANYRD+IFL+YG + Sbjct: 180 SRDFKALGVDNFRTKAAREVRDRALEKGQVNFLIQAFRYRGKANYRDSIFLSYGDNNEAT 239 Query: 279 LSGFVDDMLAVLQAFAAMAGAYCSLRVGKAAWTDFVDDLDRKKAISVSP 327 + F+ D+ V F YCS RV + AW +FV+D+ +S+ P Sbjct: 240 IEEFIQDLYDVSIGFIRSTSHYCSRRVERGAWAEFVEDISDNSRLSIDP 288 >ref|ZP_08649097.1| hypothetical protein imdm_2309 [gamma proteobacterium IMCC2047] gb|EGG98479.1| hypothetical protein imdm_2309 [gamma proteobacterium IMCC2047] Length = 317 Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 105/297 (35%), Positives = 152/297 (51%), Gaps = 9/297 (3%) Query: 26 DVPDARFALPSTIHWMRALAILVADLNVDFATGR--TFYTRVQARSVPDRELNTVCEQLL 83 D P RFA T++WMR LAILV N F+ + FY R Q R + E L Sbjct: 12 DQPKPRFAFQGTVNWMRGLAILV---NGQFSHQQLQQFYQRTQRRQPNELADALAYECLT 68 Query: 84 FVLNQIAALRALTSAPNKADVARTAIVAWYYGVYSAASAMTAAMDGSFQDNHTETARKWQ 143 ++ ++A+ ++ + + + R+AIVAWYY Y AA AM AA G+ H + WQ Sbjct: 69 MSMHNLSAINSIEAIEDPYPIVRSAIVAWYYATYYAAKAMLAASSGTDPQTHAFAGKVWQ 128 Query: 144 DAFPPIAWQCRRSPTVCRACFRPPPDAELV--PIRARGRHSLVSTPSTAQEAWGCCAEYL 201 + ++P P + V +RA H L + P+ A G YL Sbjct: 129 SEI--VDGGLVKAPFDLSITGITPNNVRQVITTLRAGNTHDLNTKPTDEDMANGTLYSYL 186 Query: 202 SGTAGWERWNVEERVRETGAFKALGVSDFRKKAARDLRDAGYARRGIGFLHQASRYRGKA 261 GTA +E+W +EE V+ + ++ G + FR AA+ LRDA + +L QA RYRGKA Sbjct: 187 KGTAEYEQWRLEEIVKNSREYRQGGFTSFRSNAAKALRDAKLNPALVNYLVQAFRYRGKA 246 Query: 262 NYRDAIFLAYGTSVPTQLSGFVDDMLAVLQAFAAMAGAYCSLRVGKAAWTDFVDDLD 318 NYRDAI+L+YG + +L FV D+ V F+ MA Y + RV + W +F+ DL+ Sbjct: 247 NYRDAIYLSYGRNDTERLRQFVSDLATVASTFSLMAAHYVAKRVIRNDWPEFIADLE 303 >ref|YP_004075579.1| phytoene dehydrogenase-like oxidoreductase [Mycobacterium sp. Spyr1] gb|ADT97744.1| phytoene dehydrogenase-like oxidoreductase [Mycobacterium sp. Spyr1] Length = 519 Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust. Identities = 43/139 (30%), Positives = 56/139 (40%), Gaps = 22/139 (15%) Query: 174 PIRARGRHSLVSTPSTAQEAWGCCAEYLSGTAGWERWNVEERVRETGAFKALGVSDFRKK 233 P RA GR +P T E + C T +ER V + + + V+D + Sbjct: 131 PTRALGRFEAAQSPKTLDEMFACA------TNEFERQAVSDILFGS-------VTDVLDR 177 Query: 234 AARDLRDAGYARRGIGFLHQASRYRGKANYRDAIFLAYGTSVP----TQLSGFVDDMLAV 289 D G R + FL + YRG A A LA+G +VP T + F M AV Sbjct: 178 YLPDREKHGALRGMLAFLAVNTTYRGPATPGSAAALAFGLAVPDENATLIKKFRGGMGAV 237 Query: 290 ----LQAFAAMAGAYCSLR 304 LQ F A AG LR Sbjct: 238 TEHLLQMFTA-AGGELRLR 255