BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0080.0024.p (351 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001417871.1| hypothetical protein Xaut_2983 [Xanthobacter... 476 e-132 ref|ZP_08073823.1| hypothetical protein Met49242DRAFT_3211 [Meth... 257 2e-66 ref|YP_386000.1| hypothetical protein Gmet_3060 [Geobacter metal... 226 3e-57 ref|ZP_01909288.1| hypothetical protein PPSIR1_38474 [Plesiocyst... 195 1e-47 ref|YP_001890147.1| hypothetical protein Bphyt_6470 [Burkholderi... 106 7e-21 >ref|YP_001417871.1| hypothetical protein Xaut_2983 [Xanthobacter autotrophicus Py2] gb|ABS68214.1| conserved hypothetical protein [Xanthobacter autotrophicus Py2] Length = 405 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 233/352 (66%), Positives = 274/352 (77%), Gaps = 1/352 (0%) Query: 1 MSSFGFTFLSKKALGQAEQSMFGGTAGVRDEVGFLIIHQRYADHFFPGTSVLHTRMRYAL 60 MSSFGFTFLS+KALGQAEQ MFGG AGVRDEVGFLI+HQRYADHFFPGTSVLHTR+RYAL Sbjct: 1 MSSFGFTFLSRKALGQAEQMMFGGAAGVRDEVGFLIVHQRYADHFFPGTSVLHTRLRYAL 60 Query: 61 LIPWIFETLRQKRPVPRDFAQAYVEMEHDITGRLKF-DGEGGEKDGVIGGDVYPKPISQP 119 LIPW++++LR KRPVP+DF QA+ ++EH++TGRLK+ DG GGEKDGVIGGDV+P+ ISQP Sbjct: 61 LIPWLYQSLRTKRPVPKDFGQAFSDLEHELTGRLKYVDGVGGEKDGVIGGDVFPRAISQP 120 Query: 120 PAYVYWTALSKWGLIGLRPDGRPWSRAEMADLLVASRTRALIDDDGKPLEGVPWPIGGLP 179 PAYVYWTAL+KWGLIG RPDGRPWSR +MA LL A R L DDDGKP E V WPI GL Sbjct: 121 PAYVYWTALAKWGLIGTRPDGRPWSRPDMAKLLAAVGKRTLHDDDGKPFETVAWPISGLI 180 Query: 180 DPPSDWSGTGKLSLAMPKEERRFLSGKLKAVRSPEDHSRPSLLSRLVDRPIEDATYCWDK 239 D P DW G GKL+L + E+ +L+ KL+AVRSP D PSLLS+LV +P+++A +CWD Sbjct: 181 DAPGDWDGGGKLTLELSPPEQIYLATKLRAVRSPTDPGEPSLLSKLVGKPLDEADHCWDG 240 Query: 240 SIVALAGDEAPMLTRAGQAAALSAIGRAIYAAQVETIKSVRDKRSPTTIHRDHLPATIAS 299 I+ALA EA ML R GQAAALSAIGRAIYAAQVE +K RDKR +HR L + Sbjct: 241 EILALADKEAAMLKRTGQAAALSAIGRAIYAAQVEILKETRDKRPQPNLHRAALKDAVEQ 300 Query: 300 WGKKAAALNLDAFHDEVGNLPGPVNKVISETHEWVRKGNHDPMQLLETYARA 351 WG AA L+++ F E+G+LP V V+ ET WVR DPM LL+ YARA Sbjct: 301 WGGPAARLDMNLFLAEIGHLPPAVEGVLKETSAWVRANGKDPMPLLDVYARA 352 >ref|ZP_08073823.1| hypothetical protein Met49242DRAFT_3211 [Methylocystis sp. ATCC 49242] gb|EFX98541.1| hypothetical protein Met49242DRAFT_3211 [Methylocystis sp. ATCC 49242] Length = 409 Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 154/347 (44%), Positives = 199/347 (57%), Gaps = 12/347 (3%) Query: 3 SFGFTFLSKKALGQAEQSMFGGTAGVRDEVGFLIIHQRYADHFFPGTSVLHTRMRYALLI 62 S G+T+LS++AL +A+ M + GVRDE+GFL IHQRYADHFFPGTSVLHTR RYA+ + Sbjct: 19 SLGWTYLSREALARAKAQMDEESMGVRDEIGFLTIHQRYADHFFPGTSVLHTRARYAIFV 78 Query: 63 PWIFETLR-QKRPVPRDFAQAYVEMEHDITGRLKFDGEGGEKDGVIGGDVYPKPISQPPA 121 PW+FE L RP +A E E + GRL+ GE VIG V+PKP SQPP+ Sbjct: 79 PWLFEDLAGLTRPAAE---RALRERERVLAGRLRDAGES----QVIGSRVFPKPSSQPPS 131 Query: 122 YVYWTALSKWGLIGLRPDGRPWSRAEMADLLVASRTRALIDDDGKPLEGVPWPIGGLPDP 181 VYW AL+ WG++ R DGR SRA LL + A DDDG+PL G P LP Sbjct: 132 TVYWNALAVWGILRPRLDGRTISRAHAHRLLKS--VSAATDDDGQPLLGFDPPFVPLPKR 189 Query: 182 PSDWSGTGKLSLAMPKEERRFLSGKLKAVRSPEDHSRPSLLSRLVDRPIEDATYCWDKSI 241 P W G ++L + E FL +L +R H SLL+RLV W Sbjct: 190 PVGWR-DGSITLRLAAAEAIFLRERLAQLRGSGGHEL-SLLARLVRTEAASPPGMWADET 247 Query: 242 VALAGDEAPMLTRAGQAAALSAIGRAIYAAQVETIKSVRDKRSPTTIHRDHLPATIASWG 301 A+AG + L RA QAA L+ +GRAIY A +E I DKR +T HRDHL + +A +G Sbjct: 248 RAIAGPDRAPLARAHQAANLAGVGRAIYDALLEHIVEAYDKRETSTRHRDHLVSIVAEYG 307 Query: 302 KKAAALNLDAFHDEVGNLPGPVNKVISETHEWVRKGNHDPMQLLETY 348 AA L++DA ++G LP + V++ T +W+ DP L E Y Sbjct: 308 AVAAKLDVDALEADIGALPSKLRAVVTATKDWIASKPTDPRPLFEVY 354 >ref|YP_386000.1| hypothetical protein Gmet_3060 [Geobacter metallireducens GS-15] gb|ABB33275.1| hypothetical protein Gmet_3060 [Geobacter metallireducens GS-15] Length = 405 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 142/354 (40%), Positives = 203/354 (57%), Gaps = 11/354 (3%) Query: 3 SFGFTFLSKKALGQAEQSMFGGTAGVRDEVGFLIIHQRYADHFFPGTSVLHTRMRYALLI 62 + G+T LS+ AL +AE + GVRDEVGFL +HQ YA+ FFPGTSVL TR+RY L + Sbjct: 5 ALGWTVLSRDALRRAEAKLRNDEQGVRDEVGFLALHQGYANRFFPGTSVLQTRLRYILFV 64 Query: 63 PWIFETLRQKRPVPRDFAQAYVEMEHDITGRLKFDGEGGEKDGVIGGDVYPKPISQPPAY 122 PW++E R R + +A ME + GRLK G+ DGVIGG YP P SQP + Sbjct: 65 PWLYEEARN-RNLSETPERAISRMEISLAGRLKRTGQ----DGVIGGRSYPGPTSQPASM 119 Query: 123 VYWTALSKWGLIGLRPDGRPWSRAEMADLLVA-SRTRALIDDDGKPLEGVPWPIGGLPDP 181 VYWTAL WG++ G RA + +LV + L+DDDG+P E +P P Sbjct: 120 VYWTALGTWGILRPTMSGTIPGRAVVNRMLVKRTMVPQLVDDDGEPTEEGLELFSSIPRP 179 Query: 182 PSDWSG-TGKLSLAMPKEERRFLSGKLKAVRSPEDHSRPSLLSRLVDR--PIEDATYCWD 238 P +W+ + L+ + +E FL L AV P + SLLS LV+R P+E+ WD Sbjct: 180 PKEWTDKSASLTFDIQPDEAAFLRRHLSAVTRPGTPDKTSLLSSLVERALPVEEIQSPWD 239 Query: 239 KSIVALA-GDEAPMLTRAGQAAALSAIGRAIYAAQVETIKSVRDKRSPTTIHRDHLPATI 297 ++++A+A D+ L RAG+A+AL+AIGRAIY+A VE ++ RD + HR + TI Sbjct: 240 RTVMAIADTDDRAALRRAGRASALAAIGRAIYSALVEELRE-RDGNETPSHHRKQILKTI 298 Query: 298 ASWGKKAAALNLDAFHDEVGNLPGPVNKVISETHEWVRKGNHDPMQLLETYARA 351 + A L++ + ++ +P ++ ET W+ KG H+ + LLE Y +A Sbjct: 299 PQYITPAKNLDISSVEQDIPGIPPQFTTLLRETQLWLNKGGHNYLDLLEVYQKA 352 >ref|ZP_01909288.1| hypothetical protein PPSIR1_38474 [Plesiocystis pacifica SIR-1] gb|EDM77795.1| hypothetical protein PPSIR1_38474 [Plesiocystis pacifica SIR-1] Length = 405 Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 126/355 (35%), Positives = 189/355 (53%), Gaps = 12/355 (3%) Query: 3 SFGFTFLSKKALGQAEQSMFGGTAGVRDEVGFLIIHQRYADHFFPGTSVLHTRMRYALLI 62 + G+T LS+ AL AE+S+ GVRDE+GFL +HQ YA+ FFPGTSVL TR+RY L I Sbjct: 4 TLGWTLLSRAALRHAERSLNEDQQGVRDEIGFLRLHQAYANRFFPGTSVLQTRLRYTLFI 63 Query: 63 PWIFETLRQKRPVPRDFAQAYVEMEHDITGRLKFDGEGGEKDGVIGGDVYPKPISQPPAY 122 PWI++ + + A+ + E + RLK E +G+IGG +P+P+SQP + Sbjct: 64 PWIYQRIAES-GARTQIAERVQQEELRLVARLKKSKE----EGIIGGRTFPRPVSQPASM 118 Query: 123 VYWTALSKWGLIGLRPDGRPWSRAEMADLLVASR-TRALIDDDGKPLEGVPWPIGGLPDP 181 VYW AL++W ++ P P +R + L R + L DDD PL+ G+P P Sbjct: 119 VYWNALTRWQIVHAPPGQEPPNRGRLHRHLGLRRPSTNLRDDDHDPLDPETSLFVGVPSP 178 Query: 182 PSDW-SGTGKLSLAMPKEERRFLSGKLKAVRSPEDHSRPSLLSRLVDRPIE--DATYCWD 238 P +W L+ +P ER F+ + V D R +LL+R+ D+ +E ++ W Sbjct: 179 PKEWFKPASALTFILPNAEREFVRRQWMTVERRVD-GRQTLLARMADQRLEVDESDLLWS 237 Query: 239 KSIVALAGDEAPMLTRAG-QAAALSAIGRAIYAAQVETIKSVRDKRSPTTIHRDHLPATI 297 +++ +A + Q AA SAIGRAIYAA ET++ D +HR+ L + Sbjct: 238 ENVRRVADADDAAALVRAEQVAAFSAIGRAIYAALTETLRVNVDGLPTPELHREQLDKVL 297 Query: 298 ASWGKKAAALNLDAFHDEVGNLPGP-VNKVISETHEWVRKGNHDPMQLLETYARA 351 A + + A AL++ A D+ L G + +V+ ET W++ L E YA A Sbjct: 298 ARYSRPAIALDIPAVLDDEPALAGSRILEVLRETKAWLQGSKRALSDLEEVYATA 352 >ref|YP_001890147.1| hypothetical protein Bphyt_6470 [Burkholderia phytofirmans PsJN] gb|ACD20776.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 398 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 97/323 (30%), Positives = 147/323 (45%), Gaps = 18/323 (5%) Query: 3 SFGFTFLSKKALGQAEQSMFG-GTAGVRDEVGFLIIHQRYADHFFPGTSVLHTRMRYALL 61 S G+ LS+ A + + + G RDE+GF IH +AD FPGTSV H ++RY Sbjct: 8 SIGWFVLSEADRASANRYLASLASDGTRDELGFAPIHFAFADRLFPGTSVQHAQLRYVFF 67 Query: 62 IPWIFETLRQKRPVPRDFAQAYVEMEHDITGRLKFDGEGGEKDGVIGGDVY---PKPISQ 118 + W ++ L + R E+E + RL + + G+ G Y +PI + Sbjct: 68 VAWGYQELLARTAGQRFSVDELFEIERRFSLRLMRTVKSLDNSGISGWTRYQAGERPIVR 127 Query: 119 PPAYVYWTALSKWGLIGLR--PDGRPWSRAEMADLLVASRTRALIDDDGKPLEGVPWPIG 176 + +YWTAL W ++G DG P + ++ ++ TR+ D+GK L V Sbjct: 128 -ASTIYWTALRSWKMVGAVGGGDGSP-TEVQLRNIWPQLVTRS-DGDEGKAL--VTTLFE 182 Query: 177 GLPDPPSDWSG-TGKLSLAMPKEERRFLSGKLKAVRSPEDHSRPSLLSRLVDRPIEDATY 235 GLP P+ W TG+L + + E +L + R D LLSRL D + + Sbjct: 183 GLPAAPAGWQNKTGELDFRLRRCEAEYLRRRW---RVAGDGGAQPLLSRLTDAGVSTESL 239 Query: 236 CWDKSIVALAG-DEAPMLTRAGQAAALSAIGRAIYAAQVETIKSVRDKRSPTTIHRDHLP 294 W + +A E L A QAA+L+ I RA ++A VE K D+ + H D P Sbjct: 240 -WSARVFDVATPSERRALVLARQAASLACIARAAHSALVEA-KRNEDRGLCESRHADAFP 297 Query: 295 ATIASWGKKAAALNLDAFHDEVG 317 + A L++DA E G Sbjct: 298 DLRDQHKETALQLDVDALQRETG 320