BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0079.0019.p         (147 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_487641.1| NnrS [Rhodopseudomonas palustris HaA2] >gi|8657...   165   3e-39
ref|YP_570913.1| NnrS [Rhodopseudomonas palustris BisB5] >gi|916...   161   4e-38
ref|YP_001203375.1| putative membrane protein, NnrS-like [Bradyr...   159   1e-37
ref|YP_001242614.1| hypothetical protein BBta_6821 [Bradyrhizobi...   158   3e-37
ref|YP_002361836.1| NnrS family protein [Methylocella silvestris...   157   4e-37

>ref|YP_487641.1| NnrS [Rhodopseudomonas palustris HaA2]
 gb|ABD08730.1| NnrS [Rhodopseudomonas palustris HaA2]
          Length = 408

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 84/141 (59%), Positives = 107/141 (75%)

Query: 1   LGFAGGLHIIRLARWAGHRTISDRLVLILHVAYAFVPVGFFLAALSSLDLVAPSAGIHAW 60
           L  AG  H++RLARWAG RT+ DRL+L+LHV Y FVP+GF L A ++  LV PSAG+HAW
Sbjct: 261 LALAGVAHLVRLARWAGDRTLRDRLLLVLHVGYLFVPLGFLLTACAAFGLVPPSAGMHAW 320

Query: 61  TGGAIGSMTIAVMTRASLGHTGQELSASTATQAVYASIIIAALARICAAVDPTYSIPLLV 120
             G  G MT+AVMTRASLGHTGQEL AS  TQAVY + ++A +AR+ AA+ P++S PLL 
Sbjct: 321 MVGGAGIMTLAVMTRASLGHTGQELRASLPTQAVYLAALVAVMARVGAALLPSWSDPLLH 380

Query: 121 IAGVAWTGAFLGFALAYAPAL 141
           ++ + W+ AFLGFAL+Y P L
Sbjct: 381 LSVLGWSVAFLGFALSYGPTL 401


>ref|YP_570913.1| NnrS [Rhodopseudomonas palustris BisB5]
 gb|ABE41012.1| NnrS [Rhodopseudomonas palustris BisB5]
          Length = 409

 Score =  161 bits (407), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/141 (58%), Positives = 105/141 (74%)

Query: 1   LGFAGGLHIIRLARWAGHRTISDRLVLILHVAYAFVPVGFFLAALSSLDLVAPSAGIHAW 60
           L  AG LH++RLARWAG RT+ + L+L+LHV Y FVP+GF L A ++  LV PSAGIHAW
Sbjct: 262 LACAGVLHLVRLARWAGDRTLREPLLLVLHVGYLFVPLGFLLTACAAFGLVPPSAGIHAW 321

Query: 61  TGGAIGSMTIAVMTRASLGHTGQELSASTATQAVYASIIIAALARICAAVDPTYSIPLLV 120
             G  G MT+AVMTRASLGHTGQEL AS  TQ VY + ++A  AR+ AA+ P++S PLL 
Sbjct: 322 MVGGAGIMTLAVMTRASLGHTGQELRASLPTQTVYLAALVAVTARVGAALLPSWSDPLLH 381

Query: 121 IAGVAWTGAFLGFALAYAPAL 141
           ++ + W+ AFLGFAL+Y P L
Sbjct: 382 VSVLGWSAAFLGFALSYGPTL 402


>ref|YP_001203375.1| putative membrane protein, NnrS-like [Bradyrhizobium sp. ORS 278]
 emb|CAL75138.1| putative membrane protein, NnrS-like [Bradyrhizobium sp. ORS 278]
          Length = 404

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 83/139 (59%), Positives = 103/139 (74%)

Query: 1   LGFAGGLHIIRLARWAGHRTISDRLVLILHVAYAFVPVGFFLAALSSLDLVAPSAGIHAW 60
           L  AG LH+IRLARWAG RT+ +RL++ILHV YAFVP+GF   A +SL    PSAG+HAW
Sbjct: 243 LAVAGVLHVIRLARWAGDRTLRERLLVILHVGYAFVPLGFLATAAASLGWTLPSAGLHAW 302

Query: 61  TGGAIGSMTIAVMTRASLGHTGQELSASTATQAVYASIIIAALARICAAVDPTYSIPLLV 120
             GA G MT+AVMTRA+LGHTGQ L+AS ATQA+Y  II+AA  R+CA + P +++ LL 
Sbjct: 303 MVGAAGIMTLAVMTRATLGHTGQALTASVATQAIYLGIIVAATTRVCAVLVPAHAVVLLH 362

Query: 121 IAGVAWTGAFLGFALAYAP 139
           +A  AW  AF GF LA+ P
Sbjct: 363 VAAFAWIIAFSGFVLAFGP 381


>ref|YP_001242614.1| hypothetical protein BBta_6821 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38708.1| putative membrane protein, NnrS-like protein [Bradyrhizobium sp.
           BTAi1]
          Length = 403

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/136 (58%), Positives = 104/136 (76%)

Query: 4   AGGLHIIRLARWAGHRTISDRLVLILHVAYAFVPVGFFLAALSSLDLVAPSAGIHAWTGG 63
           AG +H++RL RWAG RT  +RL++ILH+ YAFVP+GF ++A +S   V PSAG+HAW  G
Sbjct: 246 AGVMHVVRLGRWAGDRTFRERLLVILHIGYAFVPLGFLMSAAASFGWVLPSAGLHAWMAG 305

Query: 64  AIGSMTIAVMTRASLGHTGQELSASTATQAVYASIIIAALARICAAVDPTYSIPLLVIAG 123
           A G  T+AVMTRA+LGHTGQ L+AS ATQA+Y +I+IAAL RICA + P+++  LL +A 
Sbjct: 306 AAGVTTLAVMTRATLGHTGQPLTASAATQAIYLAILIAALTRICAVLAPSHAEGLLHVAA 365

Query: 124 VAWTGAFLGFALAYAP 139
            AW  AF G+ALA+ P
Sbjct: 366 FAWIVAFAGYALAFGP 381


>ref|YP_002361836.1| NnrS family protein [Methylocella silvestris BL2]
 gb|ACK50474.1| NnrS family protein [Methylocella silvestris BL2]
          Length = 394

 Score =  157 bits (398), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/143 (61%), Positives = 102/143 (71%), Gaps = 1/143 (0%)

Query: 4   AGGLHIIRLARWAGHRTISDRLVLILHVAYAFVPVGFFLAALSSLDLVAP-SAGIHAWTG 62
           AG LH  RLARWAG R  +D LVL+LH+ YAF P+GF L  LS+  L  P SAG+HAWT 
Sbjct: 249 AGLLHFARLARWAGDRAFADALVLVLHLGYAFAPLGFLLVGLSAFTLRIPESAGVHAWTA 308

Query: 63  GAIGSMTIAVMTRASLGHTGQELSASTATQAVYASIIIAALARICAAVDPTYSIPLLVIA 122
           GAIG MT+A+MTRASLGHTGQ L A  AT A+Y + ++A LARI AA+ P +S  LL IA
Sbjct: 309 GAIGVMTLAIMTRASLGHTGQSLHAGPATLAIYGASLLAVLARIGAALLPEWSFILLHIA 368

Query: 123 GVAWTGAFLGFALAYAPALCRAR 145
             AW GAFLGFALAY  AL   R
Sbjct: 369 AFAWAGAFLGFALAYGKALLSPR 391