BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0079.0017.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203375.1| putative membrane protein, NnrS-like [Bradyr... 140 2e-31 ref|YP_001990676.1| NnrS family protein [Rhodopseudomonas palust... 133 4e-29 ref|NP_946834.1| heme-Cu protein NnrS [Rhodopseudomonas palustri... 133 4e-29 gb|ACF98086.1| putative NnrS family protein [uncultured bacteriu... 133 4e-29 ref|YP_001242614.1| hypothetical protein BBta_6821 [Bradyrhizobi... 133 4e-29 >ref|YP_001203375.1| putative membrane protein, NnrS-like [Bradyrhizobium sp. ORS 278] emb|CAL75138.1| putative membrane protein, NnrS-like [Bradyrhizobium sp. ORS 278] Length = 404 Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 116/329 (35%), Positives = 152/329 (46%), Gaps = 54/329 (16%) Query: 3 AVIAGFLLTAVPNWTGRLPIQGGPLVALFAIWLAGRLTATFSGIIGWQLALAIDAAFLLS 62 A++ GFL TA+PNWTGRLPI+G PL+ L +W+AGR+ T S I W L +DA+FL Sbjct: 66 AIVTGFLFTAIPNWTGRLPIRGLPLLTLVIVWIAGRIAVTTSIIGPWWADLLVDASFLAL 125 Query: 63 LVAAAAREIIAGRKWGNLKVVGIVSLLAATNIAFHIEAHFNGVADYSA------------ 110 +V AAAREI+AGR W NL VV IV +L A NIAFH+EAH G AD + Sbjct: 126 VVLAAAREIVAGRNWRNLPVVAIVGMLCAGNIAFHLEAHLRGSADVAIRIGVAVIVLLLA 185 Query: 111 ---------------XDQH--RFPCG-GTFQRCRGLFSAGGYCARRYAGLCDRGADRSEL 152 H R P G F L SA + A +R+ Sbjct: 186 LIGGRITPSFTRNWLVKNHPGRLPAPFGRFDMAVVLISALSLLSWIVA------PERTGT 239 Query: 153 HAQLALASEAGSAACSLQPIRR----GDDNCR-RVRYGCMGGGSFRSRGRRCSGNC---W 204 LA+A L IR GD R R+ G +F G + W Sbjct: 240 ALALAVAG-------VLHVIRLARWAGDRTLRERLLVILHVGYAFVPLGFLATAAASLGW 292 Query: 205 SAPCYPTRSLGRPSNDIXVMTRASLGHTGQALSASTATQA---VYASIIVAALARICASV 261 + P + + I + + G A TA+ A +Y IIVAA R+CA + Sbjct: 293 TLPSAGLHAWMVGAAGIMTLAVMTRATLGHTGQALTASVATQAIYLGIIVAATTRVCAVL 352 Query: 262 EPAYSIPLLMIAGIAWTGAFLGFALAYAP 290 PA+++ LL +A AW AF GF LA+ P Sbjct: 353 VPAHAVVLLHVAAFAWIIAFSGFVLAFGP 381 >ref|YP_001990676.1| NnrS family protein [Rhodopseudomonas palustris TIE-1] gb|ACF00201.1| NnrS family protein [Rhodopseudomonas palustris TIE-1] Length = 408 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 69/107 (64%), Positives = 79/107 (73%) Query: 3 AVIAGFLLTAVPNWTGRLPIQGGPLVALFAIWLAGRLTATFSGIIGWQLALAIDAAFLLS 62 AVI GFLLTA+PNWTGRLP+QG PL L +WLAGRL TFS GW AL IDA FLL Sbjct: 84 AVITGFLLTAIPNWTGRLPLQGAPLATLAVVWLAGRLAVTFSADTGWLAALLIDACFLLL 143 Query: 63 LVAAAAREIIAGRKWGNLKVVGIVSLLAATNIAFHIEAHFNGVADYS 109 + AA REII+GR W NL VV +++LL N+AFH+EAHF G ADYS Sbjct: 144 VALAALREIISGRNWRNLNVVALLTLLLIGNVAFHLEAHFGGTADYS 190 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/74 (55%), Positives = 53/74 (71%) Query: 220 DIXVMTRASLGHTGQALSASTATQAVYASIIVAALARICASVEPAYSIPLLMIAGIAWTG 279 + VMTRASLGHTGQ L+AS TQ +Y + + A ARI A++ PA+S PLL +A ++W Sbjct: 329 TLAVMTRASLGHTGQQLTASLPTQGIYLAALFAVTARIAAALLPAWSDPLLHLAALSWAV 388 Query: 280 AFLGFALAYAPLLC 293 AFLGFAL+Y P L Sbjct: 389 AFLGFALSYGPTLL 402 >ref|NP_946834.1| heme-Cu protein NnrS [Rhodopseudomonas palustris CGA009] emb|CAE26928.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 408 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 69/107 (64%), Positives = 79/107 (73%) Query: 3 AVIAGFLLTAVPNWTGRLPIQGGPLVALFAIWLAGRLTATFSGIIGWQLALAIDAAFLLS 62 AVI GFLLTA+PNWTGRLP+QG PL L +WLAGRL TFS GW AL IDA FLL Sbjct: 84 AVITGFLLTAIPNWTGRLPLQGAPLATLAVVWLAGRLAVTFSADTGWLAALLIDACFLLL 143 Query: 63 LVAAAAREIIAGRKWGNLKVVGIVSLLAATNIAFHIEAHFNGVADYS 109 + AA REII+GR W NL VV +++LL N+AFH+EAHF G ADYS Sbjct: 144 VALAALREIISGRNWRNLNVVALLTLLLIGNVAFHLEAHFGGTADYS 190 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/74 (55%), Positives = 53/74 (71%) Query: 220 DIXVMTRASLGHTGQALSASTATQAVYASIIVAALARICASVEPAYSIPLLMIAGIAWTG 279 + VMTRASLGHTGQ L+AS TQ +Y + + A ARI A++ PA+S PLL +A ++W Sbjct: 329 TLAVMTRASLGHTGQQLTASLPTQGIYLAALFAVTARIAAALLPAWSDPLLHLAALSWAV 388 Query: 280 AFLGFALAYAPLLC 293 AFLGFAL+Y P L Sbjct: 389 AFLGFALSYGPTLL 402 >gb|ACF98086.1| putative NnrS family protein [uncultured bacterium 1042] Length = 399 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 64/109 (58%), Positives = 82/109 (75%) Query: 1 VGAVIAGFLLTAVPNWTGRLPIQGGPLVALFAIWLAGRLTATFSGIIGWQLALAIDAAFL 60 + A+I GFLLTA+PNWTGRLP+ G PL+AL +W AGR+ FS +GW+LA ID +FL Sbjct: 66 LAAIITGFLLTAIPNWTGRLPVLGLPLLALIVLWTAGRIAVFFSAAVGWRLAAVIDVSFL 125 Query: 61 LSLVAAAAREIIAGRKWGNLKVVGIVSLLAATNIAFHIEAHFNGVADYS 109 L++ AAA REI+AGR W NLKV+ + +LAA N FH+EAHF G+AD S Sbjct: 126 LAVAAAAGREIVAGRNWRNLKVLLPLMVLAAANAGFHVEAHFGGMADIS 174 Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 2/79 (2%) Query: 218 SNDIXVMTRASLGHTGQALSASTATQAVYASIIVAALARICASVEPAYSIPLLMIAGIAW 277 S + VMTRA+LGHTG+ L A A V+ASI++AA RI A+ P + + AG+ W Sbjct: 313 SMTLAVMTRATLGHTGRELKAGKAELFVFASILLAATCRIVAAFAP--HLEAIEFAGLLW 370 Query: 278 TGAFLGFALAYAPLLCSAR 296 AF GFA AY P L + Sbjct: 371 VAAFAGFAAAYGPALVRPK 389 >ref|YP_001242614.1| hypothetical protein BBta_6821 [Bradyrhizobium sp. BTAi1] gb|ABQ38708.1| putative membrane protein, NnrS-like protein [Bradyrhizobium sp. BTAi1] Length = 403 Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 66/107 (61%), Positives = 79/107 (73%) Query: 3 AVIAGFLLTAVPNWTGRLPIQGGPLVALFAIWLAGRLTATFSGIIGWQLALAIDAAFLLS 62 A++ GFL TA+PNWTGRLPI+G PL+ L +WLAGR+ TFS W AL IDA FLL Sbjct: 66 AIVTGFLFTAIPNWTGRLPIRGMPLLMLVTLWLAGRIAVTFSAFGPWWAALLIDAGFLLL 125 Query: 63 LVAAAAREIIAGRKWGNLKVVGIVSLLAATNIAFHIEAHFNGVADYS 109 +V AAAREI AGR W NL VV IV +L A N+AFH+EAH +G ADY+ Sbjct: 126 VVLAAAREIAAGRNWHNLPVVAIVGVLCAGNVAFHVEAHLHGSADYA 172 Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/72 (55%), Positives = 54/72 (75%) Query: 219 NDIXVMTRASLGHTGQALSASTATQAVYASIIVAALARICASVEPAYSIPLLMIAGIAWT 278 + VMTRA+LGHTGQ L+AS ATQA+Y +I++AAL RICA + P+++ LL +A AW Sbjct: 310 TTLAVMTRATLGHTGQPLTASAATQAIYLAILIAALTRICAVLAPSHAEGLLHVAAFAWI 369 Query: 279 GAFLGFALAYAP 290 AF G+ALA+ P Sbjct: 370 VAFAGYALAFGP 381