BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0079.0007.p (343 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_778955.1| 4Fe-4S ferredoxin iron-sulfur binding domain-co... 548 e-154 ref|YP_529909.1| 4Fe-4S ferredoxin iron-sulfur binding domain-co... 540 e-151 ref|YP_567873.1| 4Fe-4S ferredoxin [Rhodopseudomonas palustris B... 538 e-151 ref|YP_004106394.1| cytochrome c oxidase accessory protein CcoG ... 532 e-149 ref|YP_483636.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodops... 531 e-149 >ref|YP_778955.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodopseudomonas palustris BisA53] gb|ABJ03975.1| 4Fe-4S ferredoxin, iron-sulfur binding domain protein [Rhodopseudomonas palustris BisA53] Length = 485 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 255/343 (74%), Positives = 295/343 (86%) Query: 1 MKADAGPMTVNRAGRRALKHAIWLMIAWWTGGAWVLYFADAPTLVRDLATFQAPAIAYVW 60 MK A +T+ RA LKH+IWLMIAWWTGGAWVLYFADAPTLV++L TFQAP IAY+W Sbjct: 143 MKKQAEGLTLQRAAELTLKHSIWLMIAWWTGGAWVLYFADAPTLVKELVTFQAPMIAYIW 202 Query: 61 IAMLTASTYLLAGYMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEPRCSVKKAFDI 120 I +LTA+TYLLAG+MREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGE R S+KKA + Sbjct: 203 IGILTATTYLLAGFMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEQRTSLKKAEQL 262 Query: 121 RSLGEKAGDCIDCNQCVAVCPTGIDIRDGAQLGCIQCGLCIDACDAVMTKVSRKTGLIGY 180 R+ GEK GDCIDCNQCVAVCPTGIDIRDG+QL CIQCGLCIDACD VM K+ R+T LIGY Sbjct: 263 RAQGEKVGDCIDCNQCVAVCPTGIDIRDGSQLDCIQCGLCIDACDTVMKKIGRETRLIGY 322 Query: 181 DNDINVQRRVAGKQEIFKPVRARTVVYASLITVVCAVMLYALMSRTLLDVNVLHDRNPIA 240 DNDIN+ RR+ GK E+FK +R+RTVVYASLI V +MLYA+++R+LLDVNVLHDRNP+A Sbjct: 323 DNDINIHRRMEGKPEVFKMIRSRTVVYASLIATVGGIMLYAMLTRSLLDVNVLHDRNPLA 382 Query: 241 VRLSDGAIRNGYTLRFLNKRGFDRVIAIDVDGPADAKLHVIGSDSVTPDRPMIVLARDTT 300 VRLSDG++RN YT+R LNKRGFDRVIAIDV+GPA+A +HVIG DSVTPDRPMI+L RD T Sbjct: 383 VRLSDGSVRNAYTMRLLNKRGFDRVIAIDVEGPANATIHVIGMDSVTPDRPMIILGRDQT 442 Query: 301 TELRVLVTTPFDEKAEKSVPVTFRVTDIGLGEVASATDHFVLP 343 TELRVLVTT D + S P+ F +TDIGLG+VA+A D+F+ P Sbjct: 443 TELRVLVTTSPDTELAPSTPIKFHITDIGLGDVATARDNFISP 485 >ref|YP_529909.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein [Rhodopseudomonas palustris BisB18] gb|ABD85590.1| 4Fe-4S ferredoxin, iron-sulfur binding domain [Rhodopseudomonas palustris BisB18] Length = 485 Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust. Identities = 251/343 (73%), Positives = 294/343 (85%) Query: 1 MKADAGPMTVNRAGRRALKHAIWLMIAWWTGGAWVLYFADAPTLVRDLATFQAPAIAYVW 60 MK A +T+ R LKH+IW++IAWWTGGAWVLYFADAPTLV++L TFQAP IAY+W Sbjct: 143 MKKAAEGLTLQRGAELVLKHSIWILIAWWTGGAWVLYFADAPTLVKELVTFQAPMIAYIW 202 Query: 61 IAMLTASTYLLAGYMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEPRCSVKKAFDI 120 I +LT++TYLLAG+MREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGE R S+KKA Sbjct: 203 IGILTSTTYLLAGFMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEQRTSLKKAEQA 262 Query: 121 RSLGEKAGDCIDCNQCVAVCPTGIDIRDGAQLGCIQCGLCIDACDAVMTKVSRKTGLIGY 180 R+ GEK GDC+DCNQCVAVCPTGIDIR+G+QL CIQCGLCIDACDAVMTK+ R+T LIGY Sbjct: 263 RAQGEKVGDCVDCNQCVAVCPTGIDIRNGSQLDCIQCGLCIDACDAVMTKIGRETRLIGY 322 Query: 181 DNDINVQRRVAGKQEIFKPVRARTVVYASLITVVCAVMLYALMSRTLLDVNVLHDRNPIA 240 DNDIN+ RR+ GK E+F+ +R RT+VY++LI V A+MLYAL++RTLLDVNVLHDRNP+A Sbjct: 323 DNDINIHRRMEGKPEVFRMIRPRTMVYSALIVGVGAIMLYALLTRTLLDVNVLHDRNPLA 382 Query: 241 VRLSDGAIRNGYTLRFLNKRGFDRVIAIDVDGPADAKLHVIGSDSVTPDRPMIVLARDTT 300 VRLSDG++RN YT+R LNKRGFDRV+AIDV+GPADA + V+G DS+TP+RPMIVL RD T Sbjct: 383 VRLSDGSVRNAYTMRLLNKRGFDRVVAIDVEGPADATVSVVGMDSITPERPMIVLGRDQT 442 Query: 301 TELRVLVTTPFDEKAEKSVPVTFRVTDIGLGEVASATDHFVLP 343 TELRVLVT+ D K S PV F +TDIGLGEVASA D+FV P Sbjct: 443 TELRVLVTSSPDAKLAPSTPVIFHITDIGLGEVASAADNFVTP 485 >ref|YP_567873.1| 4Fe-4S ferredoxin [Rhodopseudomonas palustris BisB5] gb|ABE37972.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris BisB5] Length = 485 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 250/342 (73%), Positives = 295/342 (86%), Gaps = 1/342 (0%) Query: 2 KADAGPMTVNRAGRRALKHAIWLMIAWWTGGAWVLYFADAPTLVRDLATFQAPAIAYVWI 61 KA+ G ++ R LKH+IWLMIAWWTGGAWVLYFADAPTL+++L TFQAP +AY+WI Sbjct: 145 KAEEG-WSLQRGAELVLKHSIWLMIAWWTGGAWVLYFADAPTLIKELVTFQAPMVAYIWI 203 Query: 62 AMLTASTYLLAGYMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEPRCSVKKAFDIR 121 +LT +TY LAG+MREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGE R S+KKA R Sbjct: 204 GILTFTTYTLAGFMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGETRMSLKKAAQAR 263 Query: 122 SLGEKAGDCIDCNQCVAVCPTGIDIRDGAQLGCIQCGLCIDACDAVMTKVSRKTGLIGYD 181 +LGE+ GDC+DCNQCVAVCPTGIDIR+G QL CIQCGLCIDACD VMTK+ R T LIGYD Sbjct: 264 ALGEQVGDCVDCNQCVAVCPTGIDIRNGPQLDCIQCGLCIDACDNVMTKIGRPTRLIGYD 323 Query: 182 NDINVQRRVAGKQEIFKPVRARTVVYASLITVVCAVMLYALMSRTLLDVNVLHDRNPIAV 241 NDIN+ RR+ GK E+FKP+RARTVVY+ LI + A+MLY L++R+LLD+NVLHDRNP+AV Sbjct: 324 NDINIHRRMEGKPEVFKPLRARTVVYSGLIASIGAIMLYTLLNRSLLDLNVLHDRNPVAV 383 Query: 242 RLSDGAIRNGYTLRFLNKRGFDRVIAIDVDGPADAKLHVIGSDSVTPDRPMIVLARDTTT 301 RLSDG+IRNGYT+RFLNKRGFDRV+A+DV GP +A +HV+G+DS+TPDRPMI+LARDTTT Sbjct: 384 RLSDGSIRNGYTVRFLNKRGFDRVVAVDVVGPPNAVIHVVGTDSITPDRPMIILARDTTT 443 Query: 302 ELRVLVTTPFDEKAEKSVPVTFRVTDIGLGEVASATDHFVLP 343 ELRVLV + +++ KS PVTF VTDIGLGEVA+A D FV P Sbjct: 444 ELRVLVDSNSNQELAKSTPVTFHVTDIGLGEVATAKDVFVTP 485 >ref|YP_004106394.1| cytochrome c oxidase accessory protein CcoG [Rhodopseudomonas palustris DX-1] gb|ADU41661.1| cytochrome c oxidase accessory protein CcoG [Rhodopseudomonas palustris DX-1] Length = 485 Score = 532 bits (1370), Expect = e-149, Method: Compositional matrix adjust. Identities = 248/343 (72%), Positives = 286/343 (83%) Query: 1 MKADAGPMTVNRAGRRALKHAIWLMIAWWTGGAWVLYFADAPTLVRDLATFQAPAIAYVW 60 M+ + RA ALKH+IWLMIAWWTGGAWVLYFADAPTL+++L TF AP +AY+W Sbjct: 143 MRKAGEGFKLQRAAELALKHSIWLMIAWWTGGAWVLYFADAPTLIKELVTFDAPMVAYIW 202 Query: 61 IAMLTASTYLLAGYMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEPRCSVKKAFDI 120 I +LT +TY LAG+MREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGE R S+KKA + Sbjct: 203 IGILTFTTYTLAGFMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEKRSSLKKAAQL 262 Query: 121 RSLGEKAGDCIDCNQCVAVCPTGIDIRDGAQLGCIQCGLCIDACDAVMTKVSRKTGLIGY 180 R+LGE GDC+DCNQCVAVCPTGIDIR+G QL CIQCGLCIDACD VM K+ R T LIGY Sbjct: 263 RALGEPVGDCVDCNQCVAVCPTGIDIRNGPQLDCIQCGLCIDACDNVMKKIGRPTRLIGY 322 Query: 181 DNDINVQRRVAGKQEIFKPVRARTVVYASLITVVCAVMLYALMSRTLLDVNVLHDRNPIA 240 DNDIN+ RR+ GK EIFKP+RARTV+Y +I + MLY L +RTLLDVNVLHDRNP+A Sbjct: 323 DNDINIHRRMEGKPEIFKPIRARTVIYTVIIVAIGGAMLYKLANRTLLDVNVLHDRNPVA 382 Query: 241 VRLSDGAIRNGYTLRFLNKRGFDRVIAIDVDGPADAKLHVIGSDSVTPDRPMIVLARDTT 300 VRLSDG++RNGYT+RFLNKRGFDRV+AIDV+GP +A +HV+GSDS+TPDRPMI+L RDTT Sbjct: 383 VRLSDGSVRNGYTVRFLNKRGFDRVVAIDVEGPPNAVIHVVGSDSITPDRPMIILGRDTT 442 Query: 301 TELRVLVTTPFDEKAEKSVPVTFRVTDIGLGEVASATDHFVLP 343 TELRVLV + + +SVPVTF VTDIGLGEVAS D FV P Sbjct: 443 TELRVLVDSNSADDTPQSVPVTFHVTDIGLGEVASTKDVFVTP 485 >ref|YP_483636.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] gb|ABD04725.1| 4Fe-4S ferredoxin, iron-sulfur binding [Rhodopseudomonas palustris HaA2] Length = 515 Score = 531 bits (1369), Expect = e-149, Method: Compositional matrix adjust. Identities = 251/344 (72%), Positives = 292/344 (84%), Gaps = 3/344 (0%) Query: 2 KADAGPMTVNRAGRRALKHAIWLMIAWWTGGAWVLYFADAPTLVRDLATFQAPAIAYVWI 61 KA+ G ++ R LKH+IWLMIAWWTGGAWVLYFADAPTL++DL TFQAP +AY+WI Sbjct: 173 KAEEG-WSLQRGSELVLKHSIWLMIAWWTGGAWVLYFADAPTLIKDLVTFQAPMVAYIWI 231 Query: 62 AMLTASTYLLAGYMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEPRCSVKKAFDIR 121 +LT +TY LAG+MREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGE R S+KKA R Sbjct: 232 GILTFTTYTLAGFMREQVCVYMCPWPRIQAALTDEWALNVTYKYDRGEQRTSLKKAAQAR 291 Query: 122 SLGEKAGDCIDCNQCVAVCPTGIDIRDGAQLGCIQCGLCIDACDAVMTKVSRKTGLIGYD 181 +LGE+ GDC+DCNQCVAVCPTGIDIR+G QL CIQCGLCIDACD VMTK+ R T LIGYD Sbjct: 292 ALGEQVGDCVDCNQCVAVCPTGIDIRNGPQLDCIQCGLCIDACDNVMTKIGRPTRLIGYD 351 Query: 182 NDINVQRRVAGKQEIFKPVRARTVVYASLITVVCAVMLYALMSRTLLDVNVLHDRNPIAV 241 NDIN+ RR+ GK EIFKP+RARTVVY++LI + A+MLYAL++R+LLD+NVLHDRNP+AV Sbjct: 352 NDINIHRRMEGKPEIFKPLRARTVVYSALIAGIGAIMLYALLNRSLLDLNVLHDRNPVAV 411 Query: 242 RLSDGAIRNGYTLRFLNKRGFDRVIAIDVDGPADAKLHVIGSDSVTPDRPMIVLARDTTT 301 RLSDG+IRNGYT+RFLNKRGFDRVIA+DV GP +A +H++G+DS+ PDRPMI+LARD TT Sbjct: 412 RLSDGSIRNGYTIRFLNKRGFDRVIAVDVSGPPNAVIHIVGADSIVPDRPMIILARDATT 471 Query: 302 ELRVLVTT--PFDEKAEKSVPVTFRVTDIGLGEVASATDHFVLP 343 ELRVLV + +E S PV F VTDIGLGEVASA D FV P Sbjct: 472 ELRVLVDSRPSSEEDLAPSTPVAFHVTDIGLGEVASAKDVFVKP 515