BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0077.0020.p (197 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAL02320.2| unknown [Bradyrhizobium japonicum] 165 4e-39 ref|NP_767965.1| hypothetical protein blr1325 [Bradyrhizobium ja... 165 4e-39 ref|YP_001237121.1| hypothetical protein BBta_0959 [Bradyrhizobi... 125 4e-27 ref|ZP_07025439.1| hypothetical protein AfiDRAFT_0568 [Afipia sp... 123 2e-26 ref|YP_001208398.1| putative signal peptide [Bradyrhizobium sp. ... 116 2e-24 >gb|AAL02320.2| unknown [Bradyrhizobium japonicum] Length = 202 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 84/149 (56%), Positives = 107/149 (71%), Gaps = 4/149 (2%) Query: 49 WAQTAPPALGVQSPAQQPIPPQQQQIELPPAPVERENPGLINEIGKLFEKSKSALPPLKS 108 W Q+APPALG+Q Q PP ENPGLINE+GKLF+K S LPP+KS Sbjct: 57 WPQSAPPALGLQEQGPQAAPPPSTPAPPAGG----ENPGLINEMGKLFDKLPSILPPIKS 112 Query: 109 PGETINDLSNIARPSTVVTGRAACVVASNGAPDCKIGADRLCQSKGFREGKGIDTDASEK 168 P ET+NDLS +A PST+V+GR AC V+SNGAPDCK AD+LCQ KG+++GK ++ D++EK Sbjct: 113 PSETMNDLSRLATPSTMVSGRVACPVSSNGAPDCKQAADQLCQGKGYKQGKSLNADSAEK 172 Query: 169 CSPLVYLRGHKRGPNDCRTENFVTRAVCQ 197 CS V + G +R P+DCRT+ FVT A+CQ Sbjct: 173 CSAKVLIPGRQRKPDDCRTDTFVTSALCQ 201 >ref|NP_767965.1| hypothetical protein blr1325 [Bradyrhizobium japonicum USDA 110] dbj|BAC46590.1| blr1325 [Bradyrhizobium japonicum USDA 110] Length = 176 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 84/149 (56%), Positives = 107/149 (71%), Gaps = 4/149 (2%) Query: 49 WAQTAPPALGVQSPAQQPIPPQQQQIELPPAPVERENPGLINEIGKLFEKSKSALPPLKS 108 W Q+APPALG+Q Q P P ENPGLINE+GKLF+K S LPP+KS Sbjct: 31 WPQSAPPALGLQEQGPQ----AAPPPSTPAPPAGGENPGLINEMGKLFDKLPSILPPIKS 86 Query: 109 PGETINDLSNIARPSTVVTGRAACVVASNGAPDCKIGADRLCQSKGFREGKGIDTDASEK 168 P ET+NDLS +A PST+V+GR AC V+SNGAPDCK AD+LCQ KG+++GK ++ D++EK Sbjct: 87 PSETMNDLSRLATPSTMVSGRVACPVSSNGAPDCKQAADQLCQGKGYKQGKSLNADSAEK 146 Query: 169 CSPLVYLRGHKRGPNDCRTENFVTRAVCQ 197 CS V + G +R P+DCRT+ FVT A+CQ Sbjct: 147 CSAKVLIPGRQRKPDDCRTDTFVTSALCQ 175 >ref|YP_001237121.1| hypothetical protein BBta_0959 [Bradyrhizobium sp. BTAi1] gb|ABQ33215.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 217 Score = 125 bits (314), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 82/211 (38%), Positives = 114/211 (54%), Gaps = 47/211 (22%) Query: 26 IVLAGLALSGLALSMTLTTLDRSWAQTAPPALGVQSPAQQPIPPQQQQIELPPAPVEREN 85 +VL G+ALS AL+ T + L +S + PA G++ P P + N Sbjct: 15 VVLPGIALS--ALAWTPSALAQSALAQSAPAAGLREPPPPSPTPSAEPAP------PPSN 66 Query: 86 PGLINEIGKLFEKSK----------------SALPPLKSPG------------------- 110 PGL+ E+GKLF+K SA + +PG Sbjct: 67 PGLVEELGKLFDKMSIIPLKPSADAPVTPPASASDQVGAPGDQAAPPAPQAVPNGDAGTA 126 Query: 111 ----ETINDLSNIARPSTVVTGRAACVVASNGAPDCKIGADRLCQSKGFREGKGIDTDAS 166 ET + LS +A+PS++V+GRAAC +A+NG PDCK+GADRLCQSKG +EGK ++TD++ Sbjct: 127 GVLKETGDALSRLAKPSSMVSGRAACPMAANGTPDCKLGADRLCQSKGHKEGKSLNTDSA 186 Query: 167 EKCSPLVYLRGHKRGPNDCRTENFVTRAVCQ 197 E CS V + G +R P DCRT+ FVT A+CQ Sbjct: 187 ETCSAKVLIPGRQRKPGDCRTDTFVTSALCQ 217 >ref|ZP_07025439.1| hypothetical protein AfiDRAFT_0568 [Afipia sp. 1NLS2] gb|EFI52581.1| hypothetical protein AfiDRAFT_0568 [Afipia sp. 1NLS2] Length = 172 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 60/123 (48%), Positives = 80/123 (65%), Gaps = 9/123 (7%) Query: 84 ENPGLINEIGKLFEKSKSALPP-LKSPGETINDLS--------NIARPSTVVTGRAACVV 134 NPGL+ E+GKL + S S L K +T+ DL+ ++ R +V TGRAAC + Sbjct: 50 HNPGLVEELGKLLKDSASNLSSGWKGSQKTLEDLNAKTKDATESLTRVQSVTTGRAACPM 109 Query: 135 ASNGAPDCKIGADRLCQSKGFREGKGIDTDASEKCSPLVYLRGHKRGPNDCRTENFVTRA 194 +NGAPDC + A++LC+ KGF+ GK +D + SEKCS VYL G P +CRTEN+VTRA Sbjct: 110 TANGAPDCNVAAEQLCKGKGFKSGKSLDIETSEKCSAKVYLSGRTGAPGECRTENYVTRA 169 Query: 195 VCQ 197 VCQ Sbjct: 170 VCQ 172 >ref|YP_001208398.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL80183.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 205 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 70/193 (36%), Positives = 98/193 (50%), Gaps = 53/193 (27%) Query: 48 SWAQTAPPALGVQSPAQQPIPPQQQQIELPPAPVERENPGLINEIGKLFEKSKSALPPLK 107 SWAQ+ PPA G++ + NPGL++++GKLFEK + PLK Sbjct: 23 SWAQSPPPAAGLRE--------VPPEPAPVSPAPPSSNPGLLDDLGKLFEKI--TIIPLK 72 Query: 108 SPGETIND-------------------------------------------LSNIARPST 124 PGE + LS + +PST Sbjct: 73 RPGEADGESPARAPGEAAGAAPADQRPPPGPDRPAPSSNVQGGGLKDAGDTLSRLTKPST 132 Query: 125 VVTGRAACVVASNGAPDCKIGADRLCQSKGFREGKGIDTDASEKCSPLVYLRGHKRGPND 184 +++GR C +A+NG PDCK+GADRLCQ KG+R+GK ++TD++E CS V + G +R P D Sbjct: 133 MISGRIVCPLAANGTPDCKLGADRLCQGKGYRDGKSLNTDSAETCSARVLIPGRQRKPGD 192 Query: 185 CRTENFVTRAVCQ 197 CRT+ FVT A+CQ Sbjct: 193 CRTDTFVTSALCQ 205