BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0077.0018.p (257 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767968.1| hypothetical protein blr1328 [Bradyrhizobium ja... 390 e-107 ref|YP_001237130.1| hypothetical protein BBta_0968 [Bradyrhizobi... 373 e-101 ref|YP_001208389.1| hypothetical protein BRADO6567 [Bradyrhizobi... 369 e-100 ref|YP_779695.1| hypothetical protein RPE_0758 [Rhodopseudomonas... 332 3e-89 ref|YP_004111158.1| hypothetical protein Rpdx1_4884 [Rhodopseudo... 325 4e-87 >ref|NP_767968.1| hypothetical protein blr1328 [Bradyrhizobium japonicum USDA 110] dbj|BAC46593.1| blr1328 [Bradyrhizobium japonicum USDA 110] gb|AAL02323.2| unknown [Bradyrhizobium japonicum] Length = 257 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 189/257 (73%), Positives = 223/257 (86%) Query: 1 MEPIFRVDGDRVVTSPDAAGPWDPRMQHGSAPAALVVWAAEAIPTPVPMRIARVTIDLMR 60 M PI+RVDG+ VVTSPDAAGPWD RMQHGSAPA+LV WAAE IPTPV M IARVTIDLMR Sbjct: 1 MPPIYRVDGNSVVTSPDAAGPWDRRMQHGSAPASLVTWAAERIPTPVTMDIARVTIDLMR 60 Query: 61 PVPVAPLTVQSEILRDGRKIQLCGVRLLADGVLVVSASVLKIKQQTAELPPDITALAVDL 120 PVPVAPLT+++E+LR+GRKIQLC ++LLADGV VV A+VLKI++Q LP D+ + + L Sbjct: 61 PVPVAPLTIKTEVLREGRKIQLCEIKLLADGVQVVGATVLKIRRQAQALPDDVKEVPLAL 120 Query: 121 PGPDESMIEPGNLANSPFVKCISMRAARGRFGVMGPGAIWFRVDRPLIAGAAVSQAMRAV 180 P P++S++E G+ A SPFV+ +SMRAARGRFG G GAIWFRVD PLI G A+SQAMRAV Sbjct: 121 PSPEDSLVEDGHAATSPFVRSVSMRAARGRFGQAGAGAIWFRVDHPLIEGEAISQAMRAV 180 Query: 181 VASDFSNGTSPALDFSQWTFINADLSVSLAREPVGDWILLDGQSWIGPDGAGLAMSRLAD 240 VA+DFSNGT+ LDF WT+INADL+VSLAR+PVG+WILLDG SWIGPDGAGLAMSRLAD Sbjct: 181 VAADFSNGTASTLDFRAWTYINADLTVSLARQPVGEWILLDGDSWIGPDGAGLAMSRLAD 240 Query: 241 QRGYFGQAVQSLVIERR 257 ++GYFG+AVQSLVIE+R Sbjct: 241 RQGYFGRAVQSLVIEKR 257 >ref|YP_001237130.1| hypothetical protein BBta_0968 [Bradyrhizobium sp. BTAi1] gb|ABQ33224.1| hypothetical protein BBta_0968 [Bradyrhizobium sp. BTAi1] Length = 263 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 181/257 (70%), Positives = 214/257 (83%) Query: 1 MEPIFRVDGDRVVTSPDAAGPWDPRMQHGSAPAALVVWAAEAIPTPVPMRIARVTIDLMR 60 M PIFR+ +RV SPDAAGPWDP MQHGSAP+AL VWAAE IPT PMRIARVTIDLMR Sbjct: 7 MRPIFRIADNRVTVSPDAAGPWDPTMQHGSAPSALAVWAAERIPTKSPMRIARVTIDLMR 66 Query: 61 PVPVAPLTVQSEILRDGRKIQLCGVRLLADGVLVVSASVLKIKQQTAELPPDITALAVDL 120 PVP+A LTV++E+LR+GRKIQLC VRL A +VV+A+VLKI+Q LP D+ L VDL Sbjct: 67 PVPLAELTVETEVLREGRKIQLCAVRLRAGDTVVVTATVLKIRQDAVPLPDDVRELPVDL 126 Query: 121 PGPDESMIEPGNLANSPFVKCISMRAARGRFGVMGPGAIWFRVDRPLIAGAAVSQAMRAV 180 PGPD + EP + + SPFV+ +++RAARGRFGV GPGAIW+RVD PL+ G AVSQAMRAV Sbjct: 127 PGPDAATPEPADFSTSPFVRGMTLRAARGRFGVKGPGAIWYRVDWPLVEGHAVSQAMRAV 186 Query: 181 VASDFSNGTSPALDFSQWTFINADLSVSLAREPVGDWILLDGQSWIGPDGAGLAMSRLAD 240 VASDF NGTS ALDF +TF+NADL+V++AREPVG+WILLD +SWIGPDGAGLAM+RL D Sbjct: 187 VASDFCNGTSAALDFHSYTFLNADLTVNMAREPVGEWILLDAESWIGPDGAGLAMARLGD 246 Query: 241 QRGYFGQAVQSLVIERR 257 +GYFG+ VQSLVIE+R Sbjct: 247 AKGYFGRVVQSLVIEKR 263 >ref|YP_001208389.1| hypothetical protein BRADO6567 [Bradyrhizobium sp. ORS 278] emb|CAL80174.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 263 Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust. Identities = 180/257 (70%), Positives = 212/257 (82%) Query: 1 MEPIFRVDGDRVVTSPDAAGPWDPRMQHGSAPAALVVWAAEAIPTPVPMRIARVTIDLMR 60 M PIFRV +V SPDAAGPWDP MQHGSAP+AL VWAAE IPT PMRIARVTIDLMR Sbjct: 7 MRPIFRVTDSQVAVSPDAAGPWDPTMQHGSAPSALAVWAAERIPTKSPMRIARVTIDLMR 66 Query: 61 PVPVAPLTVQSEILRDGRKIQLCGVRLLADGVLVVSASVLKIKQQTAELPPDITALAVDL 120 PVP+A L V++E+LR+GRKIQLC VRL A +VV+A+VLKI+Q LP D+ L VDL Sbjct: 67 PVPLAQLDVETEVLREGRKIQLCAVRLRAGNTVVVTATVLKIRQDAVPLPDDVHELPVDL 126 Query: 121 PGPDESMIEPGNLANSPFVKCISMRAARGRFGVMGPGAIWFRVDRPLIAGAAVSQAMRAV 180 GPD++ EP + + SPFV+ +++RAARGRFGV GPGAIW+RVD PL+ G AVSQAMRAV Sbjct: 127 AGPDQAQPEPADFSTSPFVRGMTLRAARGRFGVRGPGAIWYRVDWPLVEGHAVSQAMRAV 186 Query: 181 VASDFSNGTSPALDFSQWTFINADLSVSLAREPVGDWILLDGQSWIGPDGAGLAMSRLAD 240 VASDF NGTS ALDF +TF+NADL+V++AREPVGDWILLD +SWIGPDGAGLAM+RL D Sbjct: 187 VASDFCNGTSAALDFHSYTFLNADLTVNMAREPVGDWILLDAESWIGPDGAGLAMARLGD 246 Query: 241 QRGYFGQAVQSLVIERR 257 +GYFG+ VQSLVIE+R Sbjct: 247 AKGYFGRVVQSLVIEKR 263 >ref|YP_779695.1| hypothetical protein RPE_0758 [Rhodopseudomonas palustris BisA53] gb|ABJ04715.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 257 Score = 332 bits (852), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 158/258 (61%), Positives = 203/258 (78%), Gaps = 2/258 (0%) Query: 1 MEPIFRVDGDRVVTSPDAAGPWDPRMQHGSAPAALVVWAAEAIPTPVPMRIARVTIDLMR 60 ME IFR+DG+ + T P AAGPWD MQHGS P+ALV + AE+IPTP PM+I R+TIDLMR Sbjct: 1 MEAIFRIDGNHITTRPYAAGPWDRTMQHGSPPSALVAFIAESIPTPQPMQIVRLTIDLMR 60 Query: 61 PVPVAPLTVQSEILRDGRKIQLCGVRLLADGVLVVSASVLKIKQQTAELPPDITALAVDL 120 PVPVAPL+ ++EI+R+GRKIQLC VRLL++GV+VVSA+VLK++ LP DI +D+ Sbjct: 61 PVPVAPLSFETEIVREGRKIQLCAVRLLSEGVVVVSATVLKMRIGAQSLPDDIAHPPIDV 120 Query: 121 PGPDES-MIEPGNLANSPFVKCISMRAARGRFGVMGPGAIWFRVDRPLIAGAAVSQAMRA 179 P P++ ++EP +N PF+ C+S+R G F +GPGAIW+R+DRPL+ G SQ MRA Sbjct: 121 PPPEQGRLLEPSGNSN-PFITCVSVREVHGGFLSLGPGAIWYRIDRPLVEGHPTSQVMRA 179 Query: 180 VVASDFSNGTSPALDFSQWTFINADLSVSLAREPVGDWILLDGQSWIGPDGAGLAMSRLA 239 VA+DFSN TS LDF +WTFINADLS++LAR+P+GDWILL+ + WIGPDG G+A S+L Sbjct: 180 AVAADFSNATSAILDFKEWTFINADLSINLARQPIGDWILLNSEMWIGPDGTGIAASKLG 239 Query: 240 DQRGYFGQAVQSLVIERR 257 D GYFG+AVQSLVIE+R Sbjct: 240 DVHGYFGRAVQSLVIEKR 257 >ref|YP_004111158.1| hypothetical protein Rpdx1_4884 [Rhodopseudomonas palustris DX-1] gb|ADU46425.1| hypothetical protein Rpdx1_4884 [Rhodopseudomonas palustris DX-1] Length = 257 Score = 325 bits (833), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 156/258 (60%), Positives = 201/258 (77%), Gaps = 2/258 (0%) Query: 1 MEPIFRVDGDRVVTSPDAAGPWDPRMQHGSAPAALVVWAAEAIPTPVPMRIARVTIDLMR 60 M+ I+R+DG + TSP+AAGPWDP MQHGS P+ALV + AE +PTP PM+IARVT+DL+R Sbjct: 1 MDSIYRIDGTDIETSPNAAGPWDPTMQHGSPPSALVTYLAEQVPTPSPMQIARVTVDLLR 60 Query: 61 PVPVAPLTVQSEILRDGRKIQLCGVRLLADGVLVVSASVLKIKQQTAELPPDITALAVDL 120 PVPV PLT Q+E+LR+GRKIQLC VRLL+ GV+VV A+VLKI+ +LP DI +D+ Sbjct: 61 PVPVGPLTYQTEVLREGRKIQLCAVRLLSKGVVVVGATVLKIRIAPPDLPDDIEHPPLDV 120 Query: 121 PGPDES-MIEPGNLANSPFVKCISMRAARGRFGVMGPGAIWFRVDRPLIAGAAVSQAMRA 179 P PD+ +++PG +PFV +S+R G FG +GPGA W+R DR L+ G SQAMRA Sbjct: 121 PHPDDCPVLDPG-FTRNPFVGGMSLRKVYGGFGEIGPGATWYRADRALVEGQPTSQAMRA 179 Query: 180 VVASDFSNGTSPALDFSQWTFINADLSVSLAREPVGDWILLDGQSWIGPDGAGLAMSRLA 239 VVA+DFSN TS LDF WTFINADL+V AR+PVGDW+LL+ + W+GPDGAG+A S+LA Sbjct: 180 VVAADFSNATSSILDFKHWTFINADLNVFFARQPVGDWVLLNSEMWLGPDGAGIASSKLA 239 Query: 240 DQRGYFGQAVQSLVIERR 257 D GYFG+A+Q+LV+E+R Sbjct: 240 DVHGYFGRAIQNLVVEQR 257