BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0077.0014.p         (80 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_530602.1| hypothetical protein RPC_0711 [Rhodopseudomonas...   110   6e-23
ref|YP_779696.1| hypothetical protein RPE_0759 [Rhodopseudomonas...   107   4e-22
ref|YP_568113.1| hypothetical protein RPD_0974 [Rhodopseudomonas...   107   5e-22
ref|YP_484486.1| hypothetical protein RPB_0864 [Rhodopseudomonas...   105   2e-21
ref|NP_950044.1| hypothetical protein RPA4710 [Rhodopseudomonas ...   103   6e-21

>ref|YP_530602.1| hypothetical protein RPC_0711 [Rhodopseudomonas palustris BisB18]
 gb|ABD86283.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 76

 Score =  110 bits (276), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 63/72 (87%), Gaps = 1/72 (1%)

Query: 8  KTPATLDELRTRVFYALQRHPLCRQVEFDIVSTPRTRR-TNWTVSMHAVQPGALWTAHEI 66
          KTPATL+E+RTRV+YAL RHPLCR V+F+IV TPR+R+  NWT+SMH+V+P ALW A +I
Sbjct: 5  KTPATLEEIRTRVYYALHRHPLCRNVQFEIVPTPRSRKGGNWTISMHSVEPDALWEASDI 64

Query: 67 VADIQEAYELDA 78
          VADIQ+AY+L A
Sbjct: 65 VADIQDAYQLAA 76


>ref|YP_779696.1| hypothetical protein RPE_0759 [Rhodopseudomonas palustris BisA53]
 gb|ABJ04716.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisA53]
          Length = 85

 Score =  107 bits (268), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 50/75 (66%), Positives = 62/75 (82%), Gaps = 1/75 (1%)

Query: 7  SKTPATLDELRTRVFYALQRHPLCRQVEFDIVSTPRTRR-TNWTVSMHAVQPGALWTAHE 65
           KT ATL+E+R RV+YALQRHPLCR+V+FD++ TPR+R+  NWTV+M AV+P ALW A  
Sbjct: 11 DKTAATLEEIRARVYYALQRHPLCRRVKFDVLQTPRSRKGVNWTVAMQAVEPDALWEASA 70

Query: 66 IVADIQEAYELDAAA 80
          IVADIQ+AYEL  AA
Sbjct: 71 IVADIQDAYELANAA 85


>ref|YP_568113.1| hypothetical protein RPD_0974 [Rhodopseudomonas palustris BisB5]
 gb|ABE38212.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 95

 Score =  107 bits (267), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 52/74 (70%), Positives = 61/74 (82%), Gaps = 1/74 (1%)

Query: 8  KTPATLDELRTRVFYALQRHPLCRQVEFDIVSTPRTRR-TNWTVSMHAVQPGALWTAHEI 66
          KT ATLDE+RTRV +AL RHPLCR V F+IVSTPRTR+  NWT+++ +V P ALW A EI
Sbjct: 22 KTAATLDEIRTRVAHALHRHPLCRDVRFEIVSTPRTRKGGNWTITIQSVAPDALWEASEI 81

Query: 67 VADIQEAYELDAAA 80
          V+DIQEAYELD AA
Sbjct: 82 VSDIQEAYELDVAA 95


>ref|YP_484486.1| hypothetical protein RPB_0864 [Rhodopseudomonas palustris HaA2]
 gb|ABD05575.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 110

 Score =  105 bits (262), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/70 (71%), Positives = 58/70 (82%), Gaps = 1/70 (1%)

Query: 8   KTPATLDELRTRVFYALQRHPLCRQVEFDIVSTPRTRR-TNWTVSMHAVQPGALWTAHEI 66
           KTPA+LDE+R RV  AL RHPLCR+V F+IVSTPRTR+  NWT+S+ AV P ALW A EI
Sbjct: 32  KTPASLDEIRARVARALHRHPLCREVRFEIVSTPRTRKGGNWTISIQAVAPDALWEASEI 91

Query: 67  VADIQEAYEL 76
           V+DIQEAYEL
Sbjct: 92  VSDIQEAYEL 101


>ref|NP_950044.1| hypothetical protein RPA4710 [Rhodopseudomonas palustris CGA009]
 emb|CAE30150.1| hypothetical protein RPA4710 [Rhodopseudomonas palustris CGA009]
          Length = 106

 Score =  103 bits (258), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 51/77 (66%), Positives = 60/77 (77%), Gaps = 1/77 (1%)

Query: 1  MALEALSKTPATLDELRTRVFYALQRHPLCRQVEFDIVSTPRTRR-TNWTVSMHAVQPGA 59
          +A+  + KT ATLDELR RV +AL RHPLCR V F+IV TPRTR+  NWT+S+ +V P A
Sbjct: 21 LAMLHVEKTSATLDELRIRVAHALHRHPLCRDVRFEIVGTPRTRKGGNWTISIQSVAPDA 80

Query: 60 LWTAHEIVADIQEAYEL 76
          LW A EIVADIQEAYEL
Sbjct: 81 LWEASEIVADIQEAYEL 97