BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0077.0001.p (354 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767981.1| hypothetical protein bll1341 [Bradyrhizobium ja... 493 e-137 ref|YP_001208368.1| hypothetical protein BRADO6545 [Bradyrhizobi... 482 e-134 ref|YP_001237252.1| hypothetical protein BBta_1096 [Bradyrhizobi... 451 e-125 ref|YP_001989578.1| membrane protein [Rhodopseudomonas palustris... 427 e-117 ref|NP_945895.1| hypothetical protein RPA0542 [Rhodopseudomonas ... 425 e-117 >ref|NP_767981.1| hypothetical protein bll1341 [Bradyrhizobium japonicum USDA 110] dbj|BAC46606.1| bll1341 [Bradyrhizobium japonicum USDA 110] Length = 361 Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust. Identities = 253/349 (72%), Positives = 304/349 (87%) Query: 6 PDRSKVLNGLETLVIGTVGGLLFLWAELPGGLISGAMVAVAIAALAGRPLAVPAVLTQSV 65 P R+K+L+ +ETLVIGT GGL+FL A LPGGLISG+M+AV IAA+AGR L +P +LTQ+V Sbjct: 13 PSRAKILSTVETLVIGTAGGLVFLVANLPGGLISGSMIAVGIAAIAGRQLTLPPILTQTV 72 Query: 66 LLLLGISLGSLMSQQLLQHMSSYPLTIGLLALATFCSTFGSSLYLQRIHGWDQTSAFLAG 125 L+LLGISLGS++S+ L+Q +S+YPLTI LLALATFCSTFGSS YLQR+HGWD+TSAFLAG Sbjct: 73 LVLLGISLGSVVSRHLIQQVSAYPLTICLLALATFCSTFGSSYYLQRVHGWDRTSAFLAG 132 Query: 126 SPGALSQITILAAEKGADVAAIAVVQTMRVIILTAALPLVLALTGVTHAAPPPLPTSVAS 185 SPGALSQITILA E+GAD+ IAVVQTMRVIILTAALP+VLA GV +A P L T++AS Sbjct: 133 SPGALSQITILAVERGADLPGIAVVQTMRVIILTAALPMVLAFAGVAPSAAPSLTTAIAS 192 Query: 186 PFGLVALVALSIGVSLLLRWIKFPASWMFGAMLASSLLHGSGLVDGGLPPWLRNVALVGI 245 P LV LVA S+ +L+LR ++FPASWMFGAM+ASS+LHG+G V+GGLP W+R VAL+GI Sbjct: 193 PLDLVELVAASLAAALILRLVRFPASWMFGAMIASSVLHGAGWVEGGLPNWVRGVALIGI 252 Query: 246 GAIIGTRFARMKTSTLLSHVNAGLGSFAIAILISAVFVAVIGFTTHVRLADVVVAFAPGA 305 GA+IG+RFARM+ TL H+NA LGSFA+AI +SA+FV ++ TT V+ +DVVVAFAPGA Sbjct: 253 GALIGSRFARMRIKTLAGHINAALGSFAVAIAVSAIFVGIVALTTQVKFSDVVVAFAPGA 312 Query: 306 MDAMLALALTLHIDPIFVGAHHLSRFLFVTISTPGIIHLFGRPQDDVDD 354 MDAMLALALTLHIDPIFVGAHHLSRF+FVTI+TPGI+HLFGR QDDVDD Sbjct: 313 MDAMLALALTLHIDPIFVGAHHLSRFVFVTIATPGIVHLFGRTQDDVDD 361 >ref|YP_001208368.1| hypothetical protein BRADO6545 [Bradyrhizobium sp. ORS 278] emb|CAL80153.1| conserved hypothetical protein; putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 361 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 257/350 (73%), Positives = 309/350 (88%) Query: 5 IPDRSKVLNGLETLVIGTVGGLLFLWAELPGGLISGAMVAVAIAALAGRPLAVPAVLTQS 64 +PDR+K L+ +ETL +GT GGLLFL A LPGGLISGAM+A AIAA+AGRPLA+P +LTQ+ Sbjct: 12 LPDRAKTLSAVETLALGTAGGLLFLVAHLPGGLISGAMMATAIAAIAGRPLAMPPILTQT 71 Query: 65 VLLLLGISLGSLMSQQLLQHMSSYPLTIGLLALATFCSTFGSSLYLQRIHGWDQTSAFLA 124 VLLLLGIS+G+++S++L+ H+S+YP+TI LLALATFCSTFGSSLYLQR+HGWD+TSA LA Sbjct: 72 VLLLLGISIGAIVSRELITHVSAYPVTIALLALATFCSTFGSSLYLQRVHGWDRTSALLA 131 Query: 125 GSPGALSQITILAAEKGADVAAIAVVQTMRVIILTAALPLVLALTGVTHAAPPPLPTSVA 184 GSPGALSQIT+LA E+GAD+ AIAVVQT+RVIILTAALPLVLA+ GV AAP L SVA Sbjct: 132 GSPGALSQITLLAVERGADLPAIAVVQTLRVIILTAALPLVLAIAGVAPAAPVSLGQSVA 191 Query: 185 SPFGLVALVALSIGVSLLLRWIKFPASWMFGAMLASSLLHGSGLVDGGLPPWLRNVALVG 244 SP GL+AL+ S+ ++L++ IKFPASW+FGAM+AS +LHG+ LVDGGLP W+R VALVG Sbjct: 192 SPLGLLALLVASLVAAVLMQLIKFPASWLFGAMVASGILHGTSLVDGGLPEWMRGVALVG 251 Query: 245 IGAIIGTRFARMKTSTLLSHVNAGLGSFAIAILISAVFVAVIGFTTHVRLADVVVAFAPG 304 IGA+IG+RFARM+ TL+SHV A LGSFAIA+ ISA+FV VI THVR +D +VAFAPG Sbjct: 252 IGALIGSRFARMRIKTLVSHVRAALGSFAIAVAISALFVTVIVLVTHVRFSDTIVAFAPG 311 Query: 305 AMDAMLALALTLHIDPIFVGAHHLSRFLFVTISTPGIIHLFGRPQDDVDD 354 AMDAM+ALALTLHIDPIFVGAHHLSRF+FVTI+TPGI+HLFGRPQ+DVDD Sbjct: 312 AMDAMMALALTLHIDPIFVGAHHLSRFVFVTIATPGIVHLFGRPQEDVDD 361 >ref|YP_001237252.1| hypothetical protein BBta_1096 [Bradyrhizobium sp. BTAi1] gb|ABQ33346.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 361 Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust. Identities = 253/350 (72%), Positives = 305/350 (87%) Query: 5 IPDRSKVLNGLETLVIGTVGGLLFLWAELPGGLISGAMVAVAIAALAGRPLAVPAVLTQS 64 +P R+K L+ LETL +GT GGL+FL A LPGGLISGAM+A IAA+AGRPL++P +LTQ+ Sbjct: 12 LPSRAKTLSALETLALGTAGGLIFLVAHLPGGLISGAMIATGIAAIAGRPLSMPPILTQT 71 Query: 65 VLLLLGISLGSLMSQQLLQHMSSYPLTIGLLALATFCSTFGSSLYLQRIHGWDQTSAFLA 124 +LLLLGIS+G+++S++L+ H+S+YPLTIGLLALATFC+TFGSSLYLQR+HGWD+TSA LA Sbjct: 72 ILLLLGISIGAVVSRELINHVSAYPLTIGLLALATFCATFGSSLYLQRVHGWDRTSALLA 131 Query: 125 GSPGALSQITILAAEKGADVAAIAVVQTMRVIILTAALPLVLALTGVTHAAPPPLPTSVA 184 GSPGALSQITILA E+GAD+ AIAVVQT+RVIILTAALPLVLAL GV AAP L VA Sbjct: 132 GSPGALSQITILAVERGADLPAIAVVQTLRVIILTAALPLVLALAGVAPAAPVSLGQPVA 191 Query: 185 SPFGLVALVALSIGVSLLLRWIKFPASWMFGAMLASSLLHGSGLVDGGLPPWLRNVALVG 244 S GL+AL+ S+ ++L++ IKFPASW+FGAM+AS +LHG+ LV+GGLP W+R +AL+G Sbjct: 192 SSLGLLALLVASLVAAMLMQLIKFPASWLFGAMVASGILHGTDLVEGGLPEWMRGIALIG 251 Query: 245 IGAIIGTRFARMKTSTLLSHVNAGLGSFAIAILISAVFVAVIGFTTHVRLADVVVAFAPG 304 IGA+IG+RFARM+ TLLSHV A LGSFAIA+ ISA FV VI THVR +D +VAFAPG Sbjct: 252 IGALIGSRFARMRVKTLLSHVKAALGSFAIAVAISAAFVTVIVLVTHVRFSDTIVAFAPG 311 Query: 305 AMDAMLALALTLHIDPIFVGAHHLSRFLFVTISTPGIIHLFGRPQDDVDD 354 AMDAM+ALALTLHIDPIFVGAHHLSRF+FVTI+TPGIIHLFGRPQ+DVDD Sbjct: 312 AMDAMMALALTLHIDPIFVGAHHLSRFVFVTIATPGIIHLFGRPQEDVDD 361 >ref|YP_001989578.1| membrane protein [Rhodopseudomonas palustris TIE-1] gb|ACE99102.1| membrane protein AbrB duplication [Rhodopseudomonas palustris TIE-1] Length = 350 Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust. Identities = 219/347 (63%), Positives = 274/347 (78%) Query: 8 RSKVLNGLETLVIGTVGGLLFLWAELPGGLISGAMVAVAIAALAGRPLAVPAVLTQSVLL 67 RSK L +ET+ IG+ GG LF WA+LPGGLI+GAM+AV A LAGR + +P L+ VL+ Sbjct: 4 RSKTLQVIETIAIGSAGGALFYWAQLPGGLITGAMIAVGAAGLAGRKMGLPPPLSHIVLM 63 Query: 68 LLGISLGSLMSQQLLQHMSSYPLTIGLLALATFCSTFGSSLYLQRIHGWDQTSAFLAGSP 127 LG+SLGS++S ++ +++SYP+TIGLLA+ATFC+TFGSS+YLQR+HGWD+TSA LAGSP Sbjct: 64 ALGVSLGSVVSPTMVHNLASYPVTIGLLAVATFCATFGSSIYLQRVHGWDRTSALLAGSP 123 Query: 128 GALSQITILAAEKGADVAAIAVVQTMRVIILTAALPLVLALTGVTHAAPPPLPTSVASPF 187 GALSQI +LA E+ ADV IAVVQ MRVIILT+A+P++LAL G+ P A+P Sbjct: 124 GALSQIIMLATERKADVPGIAVVQVMRVIILTSAVPMLLALIGMAGHGALPSRGPEATPL 183 Query: 188 GLVALVALSIGVSLLLRWIKFPASWMFGAMLASSLLHGSGLVDGGLPPWLRNVALVGIGA 247 L L+A+++GV+LLLR + FPASWMFGAML SS+LHG G V+G LP W ALVGIG Sbjct: 184 VLAVLIAVAVGVALLLRLVNFPASWMFGAMLGSSVLHGGGWVEGTLPQWAYLAALVGIGT 243 Query: 248 IIGTRFARMKTSTLLSHVNAGLGSFAIAILISAVFVAVIGFTTHVRLADVVVAFAPGAMD 307 +IG RF +K T+LS++ A LGSFA+AI ISAVFV I TT V+L D+VVAF+PGAMD Sbjct: 244 LIGARFGAIKPRTILSYIGAALGSFAVAIAISAVFVIAIMLTTPVKLNDLVVAFSPGAMD 303 Query: 308 AMLALALTLHIDPIFVGAHHLSRFLFVTISTPGIIHLFGRPQDDVDD 354 AM+ALALTLHIDP+FVGAHHLSRF++V+I TPGI+HLFG DDVDD Sbjct: 304 AMMALALTLHIDPVFVGAHHLSRFIYVSIVTPGIVHLFGHSPDDVDD 350 >ref|NP_945895.1| hypothetical protein RPA0542 [Rhodopseudomonas palustris CGA009] emb|CAE25986.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 350 Score = 425 bits (1093), Expect = e-117, Method: Compositional matrix adjust. Identities = 218/347 (62%), Positives = 273/347 (78%) Query: 8 RSKVLNGLETLVIGTVGGLLFLWAELPGGLISGAMVAVAIAALAGRPLAVPAVLTQSVLL 67 RSK L +ET+ IG+ GG LF WA+LPGGLI+GAM+AV A LAGR + +P L+ VL+ Sbjct: 4 RSKTLQVIETIAIGSAGGALFYWAQLPGGLITGAMIAVGAAGLAGRKMGLPPPLSHIVLM 63 Query: 68 LLGISLGSLMSQQLLQHMSSYPLTIGLLALATFCSTFGSSLYLQRIHGWDQTSAFLAGSP 127 LG+SLGS++S ++ +++SYP+TIGLLA+ATFC+TFGSS+YLQR+HGWD+TSA LAGSP Sbjct: 64 ALGVSLGSVVSPTMVHNLASYPVTIGLLAVATFCATFGSSIYLQRVHGWDRTSALLAGSP 123 Query: 128 GALSQITILAAEKGADVAAIAVVQTMRVIILTAALPLVLALTGVTHAAPPPLPTSVASPF 187 GALSQI +LA E+ ADV IAVVQ MRVIILT+A+P++LAL G+ P A+P Sbjct: 124 GALSQIIMLATERKADVPGIAVVQVMRVIILTSAVPMLLALIGMAGHGALPSRGPEATPL 183 Query: 188 GLVALVALSIGVSLLLRWIKFPASWMFGAMLASSLLHGSGLVDGGLPPWLRNVALVGIGA 247 L L+A+++GV+LLLR + FPASWMFGAML SS+LHG G V+G LP W ALVGIG Sbjct: 184 VLAVLIAVAVGVALLLRLVNFPASWMFGAMLGSSVLHGGGWVEGTLPQWAYLAALVGIGT 243 Query: 248 IIGTRFARMKTSTLLSHVNAGLGSFAIAILISAVFVAVIGFTTHVRLADVVVAFAPGAMD 307 +IG RF +K T+LS++ A LGSFA+AI ISAVFV I TT V+L D+VVAF+PGAMD Sbjct: 244 LIGARFGAIKPRTILSYIGAALGSFAVAIAISAVFVVAIMLTTPVKLNDLVVAFSPGAMD 303 Query: 308 AMLALALTLHIDPIFVGAHHLSRFLFVTISTPGIIHLFGRPQDDVDD 354 AM+ALALTLHIDP+FVGAHHLSRF++V+I TPGI+H FG DDVDD Sbjct: 304 AMMALALTLHIDPVFVGAHHLSRFIYVSIVTPGIVHWFGHSPDDVDD 350