BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0076.0017.p         (208 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_779116.1| polyprenyl synthetase [Rhodopseudomonas palustr...   368   e-100
ref|YP_001202735.1| putative geranyltranstransferase [Bradyrhizo...   363   1e-98
ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobiu...   362   2e-98
ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis...   360   9e-98
ref|ZP_01044657.1| polyprenyl synthetase [Nitrobacter sp. Nb-311...   358   3e-97

>ref|YP_779116.1| polyprenyl synthetase [Rhodopseudomonas palustris BisA53]
 gb|ABJ04136.1| farnesyl-diphosphate synthase [Rhodopseudomonas palustris BisA53]
          Length = 308

 Score =  368 bits (944), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 187/208 (89%), Positives = 199/208 (95%)

Query: 1   MDNSDLRRGRPTLHKAYDDATAILAGDALLTIAFDIITRDAIHKDAQVRLLLTRALARAS 60
           MDNSDLRRGRPTLHKAYDDATAILAGDALLT+AFDII+RD IH DA+VRLLLTRALARAS
Sbjct: 101 MDNSDLRRGRPTLHKAYDDATAILAGDALLTLAFDIISRDEIHPDAKVRLLLTRALARAS 160

Query: 61  GIGGMAGGQILDLAGEGRFGDREPVDVARVQQMKTGALLRFGCIAGAILGQASQKEYQAL 120
           GIGGM GGQ+LDLAGEGRFGDREPVDVAR+QQMKTGALLRFGCIAGA+LGQAS ++YQAL
Sbjct: 161 GIGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCIAGALLGQASPQQYQAL 220

Query: 121 DDYGKALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKQRVRDLLA 180
           DDYG+ALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAK+RVRDLLA
Sbjct: 221 DDYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKRRVRDLLA 280

Query: 181 RADAALSVFGDRSDVLRAAAHFVAERKN 208
           RAD ALS+FGD+  VLR AA FVAERKN
Sbjct: 281 RADEALSIFGDKGQVLRDAARFVAERKN 308


>ref|YP_001202735.1| putative geranyltranstransferase [Bradyrhizobium sp. ORS 278]
 emb|CAL74492.1| Putative Geranyltranstransferase (Farnesyl-diphosphate synthase)
           (FPP synthase) [Bradyrhizobium sp. ORS 278]
          Length = 306

 Score =  363 bits (931), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 185/208 (88%), Positives = 195/208 (93%)

Query: 1   MDNSDLRRGRPTLHKAYDDATAILAGDALLTIAFDIITRDAIHKDAQVRLLLTRALARAS 60
           MDNSDLRRGRPTLHK YDDATAILAGDALLTIAFDIITRD IH DA VRL LTRALAR +
Sbjct: 99  MDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFDIITRDEIHPDAGVRLALTRALARCA 158

Query: 61  GIGGMAGGQILDLAGEGRFGDREPVDVARVQQMKTGALLRFGCIAGAILGQASQKEYQAL 120
           G+GGMAGGQILDLAGEGRFGDR+PVDVARVQQMKTGALLRFGCIAGA+LGQAS  EY+AL
Sbjct: 159 GVGGMAGGQILDLAGEGRFGDRDPVDVARVQQMKTGALLRFGCIAGALLGQASAAEYKAL 218

Query: 121 DDYGKALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKQRVRDLLA 180
           DDYG+ALGEAFQIADDLLDVEGDAA LGKPAGADA LGKTTFVTQLGI+GAKQRVRDLLA
Sbjct: 219 DDYGRALGEAFQIADDLLDVEGDAATLGKPAGADAELGKTTFVTQLGIEGAKQRVRDLLA 278

Query: 181 RADAALSVFGDRSDVLRAAAHFVAERKN 208
           R DAALS+FG + DVLRAAAHFVAERK+
Sbjct: 279 RGDAALSIFGAKGDVLRAAAHFVAERKS 306


>ref|YP_001243373.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
 gb|ABQ39467.1| farnesyl-diphosphate synthase [Bradyrhizobium sp. BTAi1]
          Length = 307

 Score =  362 bits (930), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 185/208 (88%), Positives = 193/208 (92%)

Query: 1   MDNSDLRRGRPTLHKAYDDATAILAGDALLTIAFDIITRDAIHKDAQVRLLLTRALARAS 60
           MDNSDLRRGRPTLHK YDDATAILAGDALLTIAFDIITRD IH DA VRL LTRALAR +
Sbjct: 100 MDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFDIITRDEIHPDAGVRLALTRALARCA 159

Query: 61  GIGGMAGGQILDLAGEGRFGDREPVDVARVQQMKTGALLRFGCIAGAILGQASQKEYQAL 120
           G+GGMAGGQILDLAGEGRFGD  PVDVARVQQMKTGALLRFGCIAGA+LGQAS  EYQAL
Sbjct: 160 GVGGMAGGQILDLAGEGRFGDSGPVDVARVQQMKTGALLRFGCIAGALLGQASPAEYQAL 219

Query: 121 DDYGKALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKQRVRDLLA 180
           DDYG+ALGEAFQIADDLLDVEGDAA LGKPAGADA LGKTTFVTQLGI+GAKQRVRDLLA
Sbjct: 220 DDYGRALGEAFQIADDLLDVEGDAATLGKPAGADAELGKTTFVTQLGIEGAKQRVRDLLA 279

Query: 181 RADAALSVFGDRSDVLRAAAHFVAERKN 208
           R DAALS+FG + DVLRAAAHFVAERK+
Sbjct: 280 RGDAALSIFGSKGDVLRAAAHFVAERKS 307


>ref|YP_575971.1| polyprenyl synthetase [Nitrobacter hamburgensis X14]
 gb|ABE61511.1| farnesyl-diphosphate synthase [Nitrobacter hamburgensis X14]
          Length = 308

 Score =  360 bits (923), Expect = 9e-98,   Method: Compositional matrix adjust.
 Identities = 183/208 (87%), Positives = 196/208 (94%)

Query: 1   MDNSDLRRGRPTLHKAYDDATAILAGDALLTIAFDIITRDAIHKDAQVRLLLTRALARAS 60
           MDNSDLRRGRPTLHK  DDATAILAGD LLT+AFDIITRD +H+D  VRLLLTRALARA+
Sbjct: 101 MDNSDLRRGRPTLHKTADDATAILAGDGLLTLAFDIITRDEVHQDPAVRLLLTRALARAA 160

Query: 61  GIGGMAGGQILDLAGEGRFGDREPVDVARVQQMKTGALLRFGCIAGAILGQASQKEYQAL 120
           GIGGM GGQ+LDLAGEGRFGDREPVDVAR+QQMKTGALLRFGCI+GA+LGQASQK+YQAL
Sbjct: 161 GIGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRFGCISGALLGQASQKDYQAL 220

Query: 121 DDYGKALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKQRVRDLLA 180
           D YG+ALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAK+RVRDLLA
Sbjct: 221 DAYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKKRVRDLLA 280

Query: 181 RADAALSVFGDRSDVLRAAAHFVAERKN 208
           +AD ALS FG R DVLRAAAHFVA+RKN
Sbjct: 281 KADEALSAFGARGDVLRAAAHFVADRKN 308


>ref|ZP_01044657.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
 gb|EAQ37438.1| polyprenyl synthetase [Nitrobacter sp. Nb-311A]
          Length = 308

 Score =  358 bits (919), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 182/208 (87%), Positives = 196/208 (94%)

Query: 1   MDNSDLRRGRPTLHKAYDDATAILAGDALLTIAFDIITRDAIHKDAQVRLLLTRALARAS 60
           MDNSDLRRGRPTLHK  DDATAILAGD LLT+AFDIITRD +H+D  VRLLLTRALARA+
Sbjct: 101 MDNSDLRRGRPTLHKTTDDATAILAGDGLLTLAFDIITRDEVHQDPTVRLLLTRALARAA 160

Query: 61  GIGGMAGGQILDLAGEGRFGDREPVDVARVQQMKTGALLRFGCIAGAILGQASQKEYQAL 120
           GIGGM GGQ+LDLAGEGRFGDR PVDVARVQQMKTGALLRFGCIAGA+LGQASQ++YQAL
Sbjct: 161 GIGGMVGGQLLDLAGEGRFGDRGPVDVARVQQMKTGALLRFGCIAGALLGQASQEDYQAL 220

Query: 121 DDYGKALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKQRVRDLLA 180
           D YG+ALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAK+RVRDLLA
Sbjct: 221 DTYGRALGEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKKRVRDLLA 280

Query: 181 RADAALSVFGDRSDVLRAAAHFVAERKN 208
           +AD ALSVFG R +VLRAAAHFVA+RK+
Sbjct: 281 KADEALSVFGTRGEVLRAAAHFVADRKS 308