BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0076.0015.p         (156 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767583.1| hypothetical protein blr0943 [Bradyrhizobium ja...   225   1e-57
ref|YP_004142738.1| glutathione-dependent formaldehyde-activatin...   210   5e-53
ref|YP_004613193.1| glutathione-dependent formaldehyde-activatin...   205   2e-51
ref|YP_002823733.1| hypothetical protein NGR_b15290 [Sinorhizobi...   196   1e-48
ref|YP_001833467.1| glutathione-dependent formaldehyde-activatin...   190   5e-47

>ref|NP_767583.1| hypothetical protein blr0943 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46208.1| blr0943 [Bradyrhizobium japonicum USDA 110]
          Length = 156

 Score =  225 bits (574), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 104/148 (70%), Positives = 122/148 (82%)

Query: 7   LREGRVVTASANSNEHILTGECFCRDVRYEVADAFAYALNCHCSNCRRTTGSAFKPFAGI 66
           L  G  +T S NSN  ILTGEC+CR VRYEVAD F+YA+NCHCSNCRRTTGSAFKPFAGI
Sbjct: 9   LHAGVAMTGSENSNARILTGECYCRAVRYEVADQFSYAMNCHCSNCRRTTGSAFKPFAGI 68

Query: 67  ARDRFTVVSGADGLLIYGDELTHDAHCGRCGSLLYSLVRAGAYVHVAMGTLRDAPAIRPT 126
           A+++  +V G D  +I+GD+ THDAHC RCGSLLYS VR G +VHVAMGTL DAP+IRP+
Sbjct: 69  AQEKLRIVRGDDQRIIFGDDTTHDAHCARCGSLLYSRVRDGKWVHVAMGTLVDAPSIRPS 128

Query: 127 AHIFVGSKAPWYTISDDLPQYQEHVTQG 154
           AHIFVGSKAPW+ I+D+LPQY+ HV  G
Sbjct: 129 AHIFVGSKAPWHEITDNLPQYRGHVGDG 156


>ref|YP_004142738.1| glutathione-dependent formaldehyde-activating protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gb|ADV12688.1| glutathione-dependent formaldehyde-activating GFA [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 139

 Score =  210 bits (535), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 97/133 (72%), Positives = 111/133 (83%)

Query: 24  LTGECFCRDVRYEVADAFAYALNCHCSNCRRTTGSAFKPFAGIARDRFTVVSGADGLLIY 83
           LTG+CFC  V YEVAD F YA NCHCS+CRRTTGSAFKPFAGI R++F +  G D LLI+
Sbjct: 5   LTGKCFCGAVHYEVADEFLYAANCHCSDCRRTTGSAFKPFAGIEREKFVLTEGEDKLLIF 64

Query: 84  GDELTHDAHCGRCGSLLYSLVRAGAYVHVAMGTLRDAPAIRPTAHIFVGSKAPWYTISDD 143
           GD+  H+AHC +CGSLLYSLVR GAYVHVAMGTL D P+IRPT HIFVGSKA W+TI+DD
Sbjct: 65  GDQSGHNAHCCQCGSLLYSLVRDGAYVHVAMGTLVDDPSIRPTEHIFVGSKAGWFTITDD 124

Query: 144 LPQYQEHVTQGAE 156
           LPQYQEHV  G++
Sbjct: 125 LPQYQEHVIAGSD 137


>ref|YP_004613193.1| glutathione-dependent formaldehyde-activating GFA [Mesorhizobium
           opportunistum WSM2075]
 gb|AEH89099.1| glutathione-dependent formaldehyde-activating GFA [Mesorhizobium
           opportunistum WSM2075]
          Length = 140

 Score =  205 bits (521), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 96/134 (71%), Positives = 109/134 (81%), Gaps = 1/134 (0%)

Query: 24  LTGECFCRDVRYEVADAFAYALNCHCSNCRRTTGSAFKPFAGIARDRFTVVSGADGLLIY 83
           L+G+C C  VRY+VAD F YA NCHCSNCRRTTGSAFKPFAGI RD+  +V G D LLI+
Sbjct: 5   LSGKCLCGAVRYDVADEFVYAANCHCSNCRRTTGSAFKPFAGIERDKLALVKGEDKLLIF 64

Query: 84  GDEL-THDAHCGRCGSLLYSLVRAGAYVHVAMGTLRDAPAIRPTAHIFVGSKAPWYTISD 142
           GD+   HDAHCG CGSLLYSLVR GA+ HV MGTL D P+IRPTAHIFVGSKA W+ I+D
Sbjct: 65  GDQSGAHDAHCGLCGSLLYSLVREGAFFHVPMGTLVDDPSIRPTAHIFVGSKAGWFDITD 124

Query: 143 DLPQYQEHVTQGAE 156
           DLPQYQEHV  G++
Sbjct: 125 DLPQYQEHVIVGSD 138


>ref|YP_002823733.1| hypothetical protein NGR_b15290 [Sinorhizobium fredii NGR234]
 gb|ACP22980.1| hypothetical protein NGR_b15290 [Sinorhizobium fredii NGR234]
          Length = 144

 Score =  196 bits (498), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 88/137 (64%), Positives = 104/137 (75%)

Query: 18  NSNEHILTGECFCRDVRYEVADAFAYALNCHCSNCRRTTGSAFKPFAGIARDRFTVVSGA 77
           ++   +L G C C  V Y VAD F YA NCHC++CRRTTGSAFKPFAGI R++F+V  G 
Sbjct: 3   DTTARMLAGRCLCGSVHYVVADEFRYAANCHCTDCRRTTGSAFKPFAGIEREKFSVTKGT 62

Query: 78  DGLLIYGDELTHDAHCGRCGSLLYSLVRAGAYVHVAMGTLRDAPAIRPTAHIFVGSKAPW 137
           D L  YG E  HDA CG+CGS LYS+VR GAYVHVA+G L D P IRP+ HIFVGSKAPW
Sbjct: 63  DRLQTYGQENAHDARCGKCGSFLYSVVRDGAYVHVALGPLADEPTIRPSEHIFVGSKAPW 122

Query: 138 YTISDDLPQYQEHVTQG 154
           +TI+DDLPQY+ HV +G
Sbjct: 123 FTITDDLPQYRTHVAEG 139


>ref|YP_001833467.1| glutathione-dependent formaldehyde-activating protein [Beijerinckia
           indica subsp. indica ATCC 9039]
 gb|ACB95978.1| glutathione-dependent formaldehyde-activating GFA [Beijerinckia
           indica subsp. indica ATCC 9039]
          Length = 142

 Score =  190 bits (483), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 90/127 (70%), Positives = 99/127 (77%), Gaps = 1/127 (0%)

Query: 23  ILTGECFCRDVRYEVADAFAYALNCHCSNCRRTTGSAFKPFAGIARDRFTVVSGADGLLI 82
           ILTG C C  V Y VADAF YA+NCHCSNCRRTTGSAFKPFAGI R +  +V G D + I
Sbjct: 11  ILTGRCTCGAVEYTVADAFLYAMNCHCSNCRRTTGSAFKPFAGIERSQMRIVRGEDAVSI 70

Query: 83  YG-DELTHDAHCGRCGSLLYSLVRAGAYVHVAMGTLRDAPAIRPTAHIFVGSKAPWYTIS 141
           YG +E  HD HC  CGSLLYS+VR GAYVHVAMGTL D P IRP+ HIFVGSKA WY I+
Sbjct: 71  YGGEEAAHDVHCATCGSLLYSVVREGAYVHVAMGTLVDDPTIRPSMHIFVGSKAKWYQIT 130

Query: 142 DDLPQYQ 148
           DDLPQY+
Sbjct: 131 DDLPQYE 137