BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0076.0006.p (142 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767573.1| transcriptional regulator [Bradyrhizobium japon... 220 5e-56 ref|YP_530382.1| MarR family transcriptional regulator [Rhodopse... 199 1e-49 ref|YP_001243388.1| MarR family transcriptional regulator [Brady... 197 3e-49 ref|YP_001202724.1| MarR family transcriptional regulator [Brady... 195 2e-48 ref|YP_779128.1| MarR family transcriptional regulator [Rhodopse... 192 2e-47 >ref|NP_767573.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC46198.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 160 Score = 220 bits (561), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 109/158 (68%), Positives = 126/158 (79%), Gaps = 17/158 (10%) Query: 2 RGSVDTDFLFTLGEVFRLIRVYADKEAARYGITRAQWAVLSKVERQEGLKQTELAELLEV 61 RG VD +FLFTL E++RL+RVYADKEA+R+GITRAQWAVL+KVER EG+KQ+ELAELLEV Sbjct: 3 RGPVDQNFLFTLAELYRLLRVYADKEASRFGITRAQWAVLAKVERSEGMKQSELAELLEV 62 Query: 62 QPITLTRLIDKLCDNGWIERRSDENDRRVNRLYLK-----------------XATVLEGI 104 QPITLTRLIDKLCDN WIERRSD +DRRV RLYL+ A L+GI Sbjct: 63 QPITLTRLIDKLCDNDWIERRSDASDRRVKRLYLRKAGRQLLGKMSGLRSEITANALDGI 122 Query: 105 SPADAYRLLTQLESIKENVRNAVQTPAGEPSRKEQRYG 142 +PADA+RLLTQLE+IKENVR A+QT E +RKEQRYG Sbjct: 123 NPADAHRLLTQLEAIKENVRTAIQTSGAEQARKEQRYG 160 >ref|YP_530382.1| MarR family transcriptional regulator [Rhodopseudomonas palustris BisB18] gb|ABD86063.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris BisB18] Length = 160 Score = 199 bits (505), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 98/158 (62%), Positives = 116/158 (73%), Gaps = 17/158 (10%) Query: 2 RGSVDTDFLFTLGEVFRLIRVYADKEAARYGITRAQWAVLSKVERQEGLKQTELAELLEV 61 RGSVD +FLFTL EV RL+R YADK A+RYGITRAQWAVL+KVER EGLKQ+ELAE+LE+ Sbjct: 3 RGSVDLNFLFTLAEVQRLVRCYADKAASRYGITRAQWAVLAKVERCEGLKQSELAEMLEM 62 Query: 62 QPITLTRLIDKLCDNGWIERRSDENDRRVNRLYLK-----------------XATVLEGI 104 QPITLTRLID+LC++GWIERRSD+ DRR RLYL+ AT L GI Sbjct: 63 QPITLTRLIDRLCEHGWIERRSDDTDRRAKRLYLRKAARPLLGKLTGLRSELTATALAGI 122 Query: 105 SPADAYRLLTQLESIKENVRNAVQTPAGEPSRKEQRYG 142 SP D +RL+ LE+I+ENVR A+ P RK QR+G Sbjct: 123 SPVDVHRLVGHLETIRENVRTAIHDAHAAPQRKIQRHG 160 >ref|YP_001243388.1| MarR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ39482.1| transcriptional regulator, MarR family [Bradyrhizobium sp. BTAi1] Length = 159 Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 103/158 (65%), Positives = 121/158 (76%), Gaps = 18/158 (11%) Query: 2 RGSVDTDFLFTLGEVFRLIRVYADKEAARYGITRAQWAVLSKVERQEGLKQTELAELLEV 61 R SVD +FLFTLGE+ RL+R YADKEAAR+G+TRAQWAVL+KVER EGLKQ+ELAE +E+ Sbjct: 3 RTSVDVNFLFTLGELQRLVRAYADKEAARFGMTRAQWAVLAKVERNEGLKQSELAEQMEM 62 Query: 62 QPITLTRLIDKLCDNGWIERRSDENDRRVNRLYLKXA-----------------TVLEGI 104 QPITLTRLIDKL + G IERR D+ DRRVNRLYLK A T L+GI Sbjct: 63 QPITLTRLIDKLAEAGLIERRGDDTDRRVNRLYLKKAARPLLAKLAVLRGELTDTALQGI 122 Query: 105 SPADAYRLLTQLESIKENVRNAVQTPAGEPSRKEQRYG 142 SPA+A RL+T LE+IKENVRNA+Q+ + RKEQRYG Sbjct: 123 SPAEAERLMTHLEAIKENVRNALQSLC-DAQRKEQRYG 159 >ref|YP_001202724.1| MarR family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL74481.1| putative transcriptional regulator, MarR family [Bradyrhizobium sp. ORS 278] Length = 159 Score = 195 bits (496), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 102/158 (64%), Positives = 119/158 (75%), Gaps = 18/158 (11%) Query: 2 RGSVDTDFLFTLGEVFRLIRVYADKEAARYGITRAQWAVLSKVERQEGLKQTELAELLEV 61 R S D +FLFTL E+ RL+R YADKEAAR+G+TRAQWAVL+KVER EG+KQ+ELA+ LE+ Sbjct: 3 RTSADVNFLFTLAELQRLMRAYADKEAARFGMTRAQWAVLAKVERNEGMKQSELADQLEM 62 Query: 62 QPITLTRLIDKLCDNGWIERRSDENDRRVNRLYLKXA-----------------TVLEGI 104 QPITLTRLIDKL D G IERR D+ DRRVNRLYLK A T L+GI Sbjct: 63 QPITLTRLIDKLADAGLIERRGDDTDRRVNRLYLKKAARPLLAKLAVLRGELTDTALQGI 122 Query: 105 SPADAYRLLTQLESIKENVRNAVQTPAGEPSRKEQRYG 142 SPA+A RL+T LE+IKENVRNA+Q+ E RKEQRYG Sbjct: 123 SPAEAERLMTHLEAIKENVRNALQSLCDE-QRKEQRYG 159 >ref|YP_779128.1| MarR family transcriptional regulator [Rhodopseudomonas palustris BisA53] gb|ABJ04148.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris BisA53] Length = 160 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 95/158 (60%), Positives = 117/158 (74%), Gaps = 17/158 (10%) Query: 2 RGSVDTDFLFTLGEVFRLIRVYADKEAARYGITRAQWAVLSKVERQEGLKQTELAELLEV 61 RG VD+ F+FTL EV RL+R YADKEA RYGITRAQWAVL+KVER EG+KQ+ELAELLE+ Sbjct: 3 RGPVDSHFMFTLAEVQRLVRAYADKEARRYGITRAQWAVLAKVERFEGMKQSELAELLEM 62 Query: 62 QPITLTRLIDKLCDNGWIERRSDENDRRVNRLYLKX-----------------ATVLEGI 104 QPITLTRLID+LC+ G IERR+D+ DRR RL+L+ AT L GI Sbjct: 63 QPITLTRLIDRLCEQGLIERRADDTDRRAKRLHLRKAARPLLAKLAGLRSELTATALAGI 122 Query: 105 SPADAYRLLTQLESIKENVRNAVQTPAGEPSRKEQRYG 142 +PADA+RLL QLE+I+ENVR A+ + +KE+R+G Sbjct: 123 NPADAHRLLDQLETIRENVRAAIHDAPADAPKKERRHG 160