BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0076.0005.p (390 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767572.1| multidrug resistance protein A [Bradyrhizobium ... 597 e-168 ref|YP_001243389.1| efflux pump protein [Bradyrhizobium sp. BTAi... 548 e-154 ref|YP_001202723.1| efflux pump protein [Bradyrhizobium sp. ORS ... 541 e-151 ref|ZP_08627637.1| membrane fusion component of tripartite multi... 516 e-144 ref|YP_530381.1| secretion protein HlyD [Rhodopseudomonas palust... 510 e-142 >ref|NP_767572.1| multidrug resistance protein A [Bradyrhizobium japonicum USDA 110] dbj|BAC46197.1| multidrug resistance protein A [Bradyrhizobium japonicum USDA 110] Length = 387 Score = 597 bits (1538), Expect = e-168, Method: Compositional matrix adjust. Identities = 290/390 (74%), Positives = 337/390 (86%), Gaps = 3/390 (0%) Query: 1 MAEPVLKLAPEQKSNPGEPSPSGKASRAPRRRLMAGLRRYRRTLLLVVLPTLAAIGGIVF 60 MA+ V+K PEQK + G+P+ KA PRRR++AGLRRYRR LL+VVLP +AAIGG+ Sbjct: 1 MADQVIKFQPEQKIDSGKPTK--KAGTDPRRRIIAGLRRYRRFLLMVVLPIVAAIGGLTL 58 Query: 61 YLNGGRYVGTDDAYVGAQKVLITPEISGKIDKIVVKEGQHVKKGDELFEIDPVPFRLAVA 120 YLNGGRYVGTDDAYVGAQKVL+TP+ISGKI+K+VV+EGQ VK+GDELFEIDPVPFRLAV Sbjct: 59 YLNGGRYVGTDDAYVGAQKVLVTPDISGKIEKVVVREGQLVKQGDELFEIDPVPFRLAVD 118 Query: 121 QAKAALDQTRTTYDNLVDNIKINGRMLEFAQQSIELKKRDVERKSTLAKQNFGSQLDLDN 180 +A+A L Q ++TYDNL NIKI G ML AQQ ++LK+RDVERK L K ++GSQLDLDN Sbjct: 119 EARAQLAQAQSTYDNLRANIKIYGDMLSLAQQGVDLKQRDVERKQALVKNSYGSQLDLDN 178 Query: 181 AANAQVTAESLAQYIRQQISKDKTQLLGDIDLPIEQFPPYAQAKAKLDDAQRNLDHTVLR 240 AANA VT+ S+AQY++QQIS KTQLLGD DLP+E+FPPYAQAK+KLD+A+RNLDH V+R Sbjct: 179 AANALVTSGSIAQYVKQQISAAKTQLLGDTDLPLEKFPPYAQAKSKLDNAERNLDHAVVR 238 Query: 241 APMDGVATQVDQIQLGRFVAAGSPVFSIIDVDHPWVDANPKESDFTYVAVGQPVELDVDA 300 APM GVATQV+QIQLGR+V AG+PVFSIIDV HPWVDANPKESD TYV GQPV L+VDA Sbjct: 239 APMGGVATQVEQIQLGRYVTAGTPVFSIIDVAHPWVDANPKESDLTYVTEGQPVTLEVDA 298 Query: 301 FPNHRFKGKVGSLSPGTGAQFAILPPQNATGNFVKVVQRVPVRIYFDENDPFVKKLKAGM 360 FPNH FKGK+GSLSPGTGAQFAILPPQNATGNFVKVVQRVP+RIYFDE D +V+KLKAGM Sbjct: 299 FPNHVFKGKIGSLSPGTGAQFAILPPQNATGNFVKVVQRVPIRIYFDETDKYVRKLKAGM 358 Query: 361 SVYATIDTNHRRTLAGLLGLAPASAHPDHE 390 SVYATIDT HRR+LAGL GL+ A+A D + Sbjct: 359 SVYATIDTGHRRSLAGLFGLS-ATAGQDKD 387 >ref|YP_001243389.1| efflux pump protein [Bradyrhizobium sp. BTAi1] gb|ABQ39483.1| putative efflux pump protein (HlyD domain), EmrA-FarA family [Bradyrhizobium sp. BTAi1] Length = 385 Score = 548 bits (1411), Expect = e-154, Method: Compositional matrix adjust. Identities = 282/384 (73%), Positives = 322/384 (83%), Gaps = 3/384 (0%) Query: 1 MAEPVLKLAPEQKSNPGEPSPSGKASRAPRRRLMAGLRRYRRTLLLVVLPTLAAIGGIVF 60 MAEP LKLAP+QK+NP P ++ R + RR ++L LAA GG+ Sbjct: 1 MAEPALKLAPDQKTNPDAAPPPAVEAKPARPGFLRRYRRPLLLIVLP---LLAAAGGLAL 57 Query: 61 YLNGGRYVGTDDAYVGAQKVLITPEISGKIDKIVVKEGQHVKKGDELFEIDPVPFRLAVA 120 YLNGGRYV TDDAYVGAQKVLITP+ISGKI K+VVKEGQ V+KGDELFEIDPVP+RLAV Sbjct: 58 YLNGGRYVTTDDAYVGAQKVLITPDISGKIVKVVVKEGQQVQKGDELFEIDPVPYRLAVD 117 Query: 121 QAKAALDQTRTTYDNLVDNIKINGRMLEFAQQSIELKKRDVERKSTLAKQNFGSQLDLDN 180 QAKAAL+Q RT+Y+NL N+KI G+ML+ AQQ I+LK++DVERK TLAK NFGSQLDLDN Sbjct: 118 QAKAALEQARTSYENLTANVKIYGQMLDLAQQGIDLKQKDVERKQTLAKNNFGSQLDLDN 177 Query: 181 AANAQVTAESLAQYIRQQISKDKTQLLGDIDLPIEQFPPYAQAKAKLDDAQRNLDHTVLR 240 AANA VTA + AQ+I+QQ+S +TQLLG+ DLP+EQFPPY QAKAKL+DAQR+LDHT LR Sbjct: 178 AANALVTASAQAQFIKQQLSNARTQLLGNPDLPLEQFPPYVQAKAKLEDAQRDLDHTTLR 237 Query: 241 APMDGVATQVDQIQLGRFVAAGSPVFSIIDVDHPWVDANPKESDFTYVAVGQPVELDVDA 300 APM GVATQVDQIQLGRFV AG+PVFS+IDV +PWVDANPKESDFTYVAVGQPVELDVDA Sbjct: 238 APMPGVATQVDQIQLGRFVTAGTPVFSVIDVSNPWVDANPKESDFTYVAVGQPVELDVDA 297 Query: 301 FPNHRFKGKVGSLSPGTGAQFAILPPQNATGNFVKVVQRVPVRIYFDENDPFVKKLKAGM 360 FPNHRFKG +GSLSPGTGAQFAILPPQNA+GNFVKVVQRVPVRIYFD+ D FV +LKAGM Sbjct: 298 FPNHRFKGTIGSLSPGTGAQFAILPPQNASGNFVKVVQRVPVRIYFDKTDKFVTRLKAGM 357 Query: 361 SVYATIDTNHRRTLAGLLGLAPAS 384 SV +IDT H+RTLAGL G A A+ Sbjct: 358 SVNVSIDTGHQRTLAGLFGAAHAA 381 >ref|YP_001202723.1| efflux pump protein [Bradyrhizobium sp. ORS 278] emb|CAL74480.1| putative efflux pump protein (HlyD domain), EmrA-FarA family [Bradyrhizobium sp. ORS 278] Length = 385 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 282/384 (73%), Positives = 319/384 (83%), Gaps = 3/384 (0%) Query: 1 MAEPVLKLAPEQKSNPGEPSPSGKASRAPRRRLMAGLRRYRRTLLLVVLPTLAAIGGIVF 60 MAEP LKLAPEQK++P P+ A++ R + RR ++L +AAIGG V Sbjct: 1 MAEPALKLAPEQKASPDAAPPAAAAAKPARPGFLRRYRRTLLLVVLP---LVAAIGGFVL 57 Query: 61 YLNGGRYVGTDDAYVGAQKVLITPEISGKIDKIVVKEGQHVKKGDELFEIDPVPFRLAVA 120 YLNGGRYV TDDAYVGAQKVLITP+ISGKI K++VKEGQ V+KGDELFEID VP+RLAV Sbjct: 58 YLNGGRYVTTDDAYVGAQKVLITPDISGKIIKVLVKEGQQVEKGDELFEIDAVPYRLAVD 117 Query: 121 QAKAALDQTRTTYDNLVDNIKINGRMLEFAQQSIELKKRDVERKSTLAKQNFGSQLDLDN 180 QAKAAL Q RT YDNL NIKI G+ML+ A Q I+LK++DVERK TLAK NFGSQLDLDN Sbjct: 118 QAKAALAQARTAYDNLTANIKIYGQMLDLANQGIDLKQKDVERKQTLAKNNFGSQLDLDN 177 Query: 181 AANAQVTAESLAQYIRQQISKDKTQLLGDIDLPIEQFPPYAQAKAKLDDAQRNLDHTVLR 240 AANA VTA + AQ+I+QQ+S KTQLLG+ DLP+E+FPPY QAKAKL+DAQR+LDHT LR Sbjct: 178 AANALVTAGAQAQFIKQQLSNAKTQLLGNPDLPLEEFPPYVQAKAKLEDAQRDLDHTTLR 237 Query: 241 APMDGVATQVDQIQLGRFVAAGSPVFSIIDVDHPWVDANPKESDFTYVAVGQPVELDVDA 300 APM G+ATQVDQIQLGRFVAAG+PVFS+ID+ +PWVDANPKESDFTYVAVGQPVELDVDA Sbjct: 238 APMPGIATQVDQIQLGRFVAAGTPVFSVIDISNPWVDANPKESDFTYVAVGQPVELDVDA 297 Query: 301 FPNHRFKGKVGSLSPGTGAQFAILPPQNATGNFVKVVQRVPVRIYFDENDPFVKKLKAGM 360 FPNHRFKG V SLSPGTGAQFAILPPQNATGNFVKVVQRVPVRI FD+ D FV +LKAGM Sbjct: 298 FPNHRFKGTVSSLSPGTGAQFAILPPQNATGNFVKVVQRVPVRIAFDKTDKFVARLKAGM 357 Query: 361 SVYATIDTNHRRTLAGLLGLAPAS 384 SV +IDT H RTLAGL G A A+ Sbjct: 358 SVNVSIDTGHERTLAGLFGSAHAA 381 >ref|ZP_08627637.1| membrane fusion component of tripartite multidrug resistance system [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09541.1| membrane fusion component of tripartite multidrug resistance system [Bradyrhizobiaceae bacterium SG-6C] Length = 387 Score = 516 bits (1330), Expect = e-144, Method: Compositional matrix adjust. Identities = 254/388 (65%), Positives = 303/388 (78%), Gaps = 3/388 (0%) Query: 1 MAEPVLKLAPEQKSNPGEPSPSGKASRAPRRRLMAGLRRYRRTLLLVVLPTLAAIGGIVF 60 MA+ V+K EQK+ P +P+ +A R R A R RRTLLLVV+P +A + G+ F Sbjct: 1 MADQVVKFPAEQKA-PETTAPAAEAPRKKSWRQFA--REKRRTLLLVVVPLIALVAGVAF 57 Query: 61 YLNGGRYVGTDDAYVGAQKVLITPEISGKIDKIVVKEGQHVKKGDELFEIDPVPFRLAVA 120 YL+GGRY TDDAYVGAQKVLITP+ISGKI K+++KEGQ VK GDELFEIDPVPFR A+ Sbjct: 58 YLSGGRYASTDDAYVGAQKVLITPDISGKIQKVLIKEGQKVKAGDELFEIDPVPFRFALQ 117 Query: 121 QAKAALDQTRTTYDNLVDNIKINGRMLEFAQQSIELKKRDVERKSTLAKQNFGSQLDLDN 180 QAKA L+ +T Y NL DN+KI +ML+ A+Q +ELK+RDVERK++L K GSQLDLD Sbjct: 118 QAKATLETAKTNYTNLRDNVKIYAQMLDLARQGVELKQRDVERKASLVKSQSGSQLDLDT 177 Query: 181 AANAQVTAESLAQYIRQQISKDKTQLLGDIDLPIEQFPPYAQAKAKLDDAQRNLDHTVLR 240 + V A + + ++QQ+S K QLLG+ DLP+E+FPPY QAKA LD AQRNLDHTVLR Sbjct: 178 STTNLVLARAQLEMLQQQLSSSKNQLLGNPDLPLEEFPPYFQAKAALDQAQRNLDHTVLR 237 Query: 241 APMDGVATQVDQIQLGRFVAAGSPVFSIIDVDHPWVDANPKESDFTYVAVGQPVELDVDA 300 AP+DG ATQVD IQLGRFV AG+PVFS+ID HPWVDAN KESD TYVA GQPV + +DA Sbjct: 238 APIDGTATQVDSIQLGRFVNAGAPVFSVIDDAHPWVDANLKESDLTYVAKGQPVTMSIDA 297 Query: 301 FPNHRFKGKVGSLSPGTGAQFAILPPQNATGNFVKVVQRVPVRIYFDENDPFVKKLKAGM 360 FP+H FKG VGSLSPGTGAQFAILPPQNATGNFVKVVQRVPVRIYFD +D V+KLKAGM Sbjct: 298 FPDHTFKGTVGSLSPGTGAQFAILPPQNATGNFVKVVQRVPVRIYFDAHDAAVRKLKAGM 357 Query: 361 SVYATIDTNHRRTLAGLLGLAPASAHPD 388 S + +DT H+RTLAGLLG + A+A + Sbjct: 358 STFVWVDTGHQRTLAGLLGFSSATAQEN 385 >ref|YP_530381.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18] gb|ABD86062.1| secretion protein HlyD [Rhodopseudomonas palustris BisB18] Length = 387 Score = 510 bits (1313), Expect = e-142, Method: Compositional matrix adjust. Identities = 259/387 (66%), Positives = 306/387 (79%), Gaps = 2/387 (0%) Query: 1 MAEPVLKLAPEQKSNPGEPSPSGKASRAPRRRLMAGLRRYRRTLLLVVLPTLAAIGGIVF 60 MA+PVLKLAPEQK NP P P+ + + APRR L L+ YRR LLL+VLP L I GI F Sbjct: 1 MADPVLKLAPEQKGNP--PEPTTQRAAAPRRSLFGALKAYRRPLLLIVLPLLVLIAGIAF 58 Query: 61 YLNGGRYVGTDDAYVGAQKVLITPEISGKIDKIVVKEGQHVKKGDELFEIDPVPFRLAVA 120 YL GGRYV TDDAYVGAQKVLITP+++GKI + VKEGQ V GD LF+IDPVPF+LAV Sbjct: 59 YLEGGRYVTTDDAYVGAQKVLITPDVAGKIIDVAVKEGQLVNTGDVLFQIDPVPFQLAVQ 118 Query: 121 QAKAALDQTRTTYDNLVDNIKINGRMLEFAQQSIELKKRDVERKSTLAKQNFGSQLDLDN 180 QAKA LD +T++DNLV N+K+ G+ +E I +K+RDVERK +L K + GSQLDLDN Sbjct: 119 QAKAKLDDAKTSHDNLVANVKLYGQTVELVNAGIAIKQRDVERKGSLVKSSAGSQLDLDN 178 Query: 181 AANAQVTAESLAQYIRQQISKDKTQLLGDIDLPIEQFPPYAQAKAKLDDAQRNLDHTVLR 240 + +A V+A++ Q ++QQ+S QLLG+ +LP+EQFP Y QAKA LDDAQRNLD + +R Sbjct: 179 SNSALVSAQAQLQLVKQQLSTALNQLLGNPELPLEQFPAYMQAKAALDDAQRNLDLSTVR 238 Query: 241 APMDGVATQVDQIQLGRFVAAGSPVFSIIDVDHPWVDANPKESDFTYVAVGQPVELDVDA 300 APM+G ATQVD IQLGRFVAAG+PVFS+ID PWVDANPKESDFTYV VGQ V +D+DA Sbjct: 239 APMNGTATQVDNIQLGRFVAAGNPVFSVIDTTAPWVDANPKESDFTYVTVGQKVTIDIDA 298 Query: 301 FPNHRFKGKVGSLSPGTGAQFAILPPQNATGNFVKVVQRVPVRIYFDENDPFVKKLKAGM 360 FP+H F G VGSLSPGTGAQFAILP QNATGNFVKVVQRVPVRIYFD ND V+KLKAGM Sbjct: 299 FPDHAFIGTVGSLSPGTGAQFAILPAQNATGNFVKVVQRVPVRIYFDTNDRAVRKLKAGM 358 Query: 361 SVYATIDTNHRRTLAGLLGLAPASAHP 387 S Y +IDT H R+LAGL+GL+ A A P Sbjct: 359 SSYVSIDTKHTRSLAGLIGLSSAKAQP 385