BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0075.0063.p (556 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770115.1| hypothetical protein bll3475 [Bradyrhizobium ja... 812 0.0 ref|YP_001768521.1| YidE/YbjL duplication [Methylobacterium sp. ... 407 e-111 ref|YP_584133.1| putative transporter [Cupriavidus metallidurans... 385 e-104 gb|EGP44950.1| aspartate:alanine antiporter family protein 1 [Ac... 370 e-100 gb|EFV83460.1| YidE/YbjL duplication [Achromobacter xylosoxidans... 370 e-100 >ref|NP_770115.1| hypothetical protein bll3475 [Bradyrhizobium japonicum USDA 110] sp|Q89PK5.1|Y3475_BRAJA RecName: Full=Uncharacterized transporter bll3475 dbj|BAC48740.1| hypothetical membrane protein [Bradyrhizobium japonicum USDA 110] Length = 516 Score = 812 bits (2098), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/516 (81%), Positives = 465/516 (90%), Gaps = 8/516 (1%) Query: 1 LTWLAQFLVRYPELALFLVIAA-------XIGAFSLGPVTGALFAGLAVGDFAHVPVSSM 53 LTWL QFL+RYPELALFLVIAA IGAFSLGPVTGALFAGL VGDFAHVPVSSM Sbjct: 2 LTWLEQFLIRYPELALFLVIAAGYWIGSFKIGAFSLGPVTGALFAGLVVGDFAHVPVSSM 61 Query: 54 TKSFLFLLFLFGVGYSVGPQFVLAMKRDGLKPMLIAVVVSLTGLAAAIVVARALRLDPGF 113 TKSFLFLLFLFGVGYSVGPQFV AMKRDGLKP+L+AVVV LTGLAAAI V R L LDPGF Sbjct: 62 TKSFLFLLFLFGVGYSVGPQFVQAMKRDGLKPVLLAVVVCLTGLAAAIAVGRILGLDPGF 121 Query: 114 AAGLLSGALSQSAAMGTATDAVNSLPVSEAERALFVSHIAVADAVCYIFGYAGVITFCTI 173 AAGL+SG+LSQSAAMGTATDAVN L V EA+RAL++SHIAVADAVCYIFGYAGVI +CT+ Sbjct: 122 AAGLMSGSLSQSAAMGTATDAVNGLAVPEAQRALYISHIAVADAVCYIFGYAGVIMWCTV 181 Query: 174 VVPALLKIDLKTEALKLEQALGITRAKPGLASAWRKFELRAYRLDAHAAIVGLTVAATEA 233 V PALLKIDL+ EALKLE++LG++RAKPGLASAWRKFELRAYRLD H+ ++G TVAA EA Sbjct: 182 VAPALLKIDLRDEALKLERSLGMSRAKPGLASAWRKFELRAYRLDEHSPLIGSTVAAAEA 241 Query: 234 RVPGQRVFIHRIRRGERILEAEPATVLAAGDVVALSAPRQIIVELIGPRGEEVEDRELLD 293 R P R+FIHRIRRGER+L+AEP T+LA GDV+ +SAPRQIIVELIG R EEVEDRELLD Sbjct: 242 R-PEHRLFIHRIRRGERVLQAEPGTILAPGDVITISAPRQIIVELIGSRAEEVEDRELLD 300 Query: 294 IPVVAADVFLINTKLAGSSLQQASEQDWTRGLYLRSVSRGGEALPIAAGTVLERGDLLRI 353 IP+++ADVFLIN KLAG +LQ+AS+QDWT GLYLRS+SRGG+ LPIA G VL+RGDLLRI Sbjct: 301 IPLISADVFLINAKLAGMNLQEASQQDWTHGLYLRSLSRGGQELPIAPGVVLQRGDLLRI 360 Query: 354 VGPEAVVQNAAKNIGVIVAPSTTIDFVVLGLAIFLGGLVGVLVSFSVGGVTISLSTSVGT 413 VGPE VV+NAAKNIGVIVAPS +IDFVVLGLAIF GG+VGVLVSF VG + I+LSTSVGT Sbjct: 361 VGPEPVVENAAKNIGVIVAPSNSIDFVVLGLAIFFGGVVGVLVSFPVGSIKIALSTSVGT 420 Query: 414 LLAGLLVGYLRTRLPYFGRIPDGAISLMTSLGLAAFVGLTGIHAGPIFLAAIRESGIGLL 473 LLAGLLVG+LRT P FGRIPDGAISLMTSLGLAAFVGLTGIHAGPIFL+A+R+SGI LL Sbjct: 421 LLAGLLVGHLRTLDPRFGRIPDGAISLMTSLGLAAFVGLTGIHAGPIFLSALRDSGISLL 480 Query: 474 LGGMIVTLLPQIVGFCFGHFVLRMNPILLLGALTGA 509 LGGM+VTLLPQIVGFCFGHFVLRMNPILLLG LTGA Sbjct: 481 LGGMVVTLLPQIVGFCFGHFVLRMNPILLLGGLTGA 516 >ref|YP_001768521.1| YidE/YbjL duplication [Methylobacterium sp. 4-46] gb|ACA16087.1| YidE/YbjL duplication [Methylobacterium sp. 4-46] Length = 563 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 230/562 (40%), Positives = 340/562 (60%), Gaps = 11/562 (1%) Query: 1 LTWLAQFLVRYPELALFLVIA--AXIGAFS-----LGPVTGALFAGLAVGDFAHVPVSSM 53 W A L +YPE+A+F+ +A G+F+ +G VT L A + +G + V+ Sbjct: 2 FDWFANTLRQYPEIAIFIALAFGYYFGSFTYKGLGIGAVTATLIAAVVIGQIG-ISVTGP 60 Query: 54 TKSFLFLLFLFGVGYSVGPQFVLAMKRDGLKPMLIAVVVSLTGLAAAIVVARALRLDPGF 113 K F FL+FLF +GY+VGPQFV + +DGL L AV+V + LA + AR D G Sbjct: 61 LKPFFFLMFLFAIGYAVGPQFVRGVAQDGLPQALFAVIVCVFCLAGGYLAARFGGYDAGS 120 Query: 114 AAGLLSGALSQSAAMGTATDAVNSLPVSEAERALFVSHIAVADAVCYIFGYAGVITFCTI 173 AAGL +G+ + SA+MG ATDA+N LP+ + + + VA A+ YIFG G + Sbjct: 121 AAGLYAGSQTISASMGLATDAINRLPIPAEQAKALLDAMPVAYAITYIFGTLGSAVIIAL 180 Query: 174 VVPALLKIDLKTEALKLEQALGITRAKPGLASAWRKFELRAYRLDAHAAIVGLTVAATEA 233 + PALL IDL+ + E+ G T+ G +AW +F+LRAYR+ IVG T A E Sbjct: 181 LGPALLGIDLEAACKRYEEKRGGTKVAGGPGTAWHQFDLRAYRVRPDGIIVGKTAAEAER 240 Query: 234 RVPGQRVFIHRIRRGERILEAEPATVLAAGDVVALSAPRQIIVELIGPRGEEVEDRELLD 293 VP QR++I R+RRG +++ TV+ AGDVVA++ R+++V LIG EEV+DRELL Sbjct: 241 MVPEQRLYIERLRRGANVMDVTADTVIQAGDVVAVAGRREVLVGLIGAAAEEVDDRELLA 300 Query: 294 IPVVAADVFLINTKLAGSSLQQASEQDWTRGLYLRSVSRGGEA--LPIAAGTVLERGDLL 351 +PV DV++ + ++ G SL + ++ W RG++LR ++RG A +PI T + RGD+L Sbjct: 301 VPVEGLDVYVTSREVDGKSLAELAQSPWARGVFLRKITRGATAIDIPILPSTRINRGDIL 360 Query: 352 RIVGPEAVVQNAAKNIGVIVAPSTTIDFVVLGLAIFLGGLVGVLVSFSVGGVTISLSTSV 411 +VG V A K IG + D + +G AI +G LVG +V ++VGGV ++LSTS Sbjct: 361 TLVGRTQDVSAATKAIGHPDRATDVADVMFIGAAIAIGALVGAVV-YTVGGVPLTLSTSG 419 Query: 412 GTLLAGLLVGYLRTRLPYFGRIPDGAISLMTSLGLAAFVGLTGIHAGPIFLAAIRESGIG 471 G L++GL G+LR+ P FGRIP + M S+GL F+ + GI +GP F+A +++ G G Sbjct: 420 GALISGLFFGWLRSVRPMFGRIPSSTVWFMNSVGLNVFIAIVGISSGPKFVAGLQQLGYG 479 Query: 472 LLLGGMIVTLLPQIVGFCFGHFVLRMNPILLLGALTGAQTVTAAMAAIQERSGSSVVVLG 531 + L G+ T LP I+ G ++ R + +LLGA+ GA+T TAA+ + +R+ S + LG Sbjct: 480 IFLWGIFATTLPLILALYAGKYLFRFDDAILLGAVAGARTTTAALGMVTDRAKSQIPGLG 539 Query: 532 YTPAYPISNILLTTWGSVMVVV 553 YT Y +SN LT WG V+V++ Sbjct: 540 YTVTYAVSNTFLTIWGMVLVML 561 >ref|YP_584133.1| putative transporter [Cupriavidus metallidurans CH34] gb|ABF08864.1| putative transporter [Cupriavidus metallidurans CH34] Length = 561 Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust. Identities = 226/565 (40%), Positives = 325/565 (57%), Gaps = 14/565 (2%) Query: 1 LTWLAQFLVRYPELALFLV--IAAXIGA-----FSLGPVTGALFAGLAVGDFAHVPVSSM 53 +TW L YPE+A+FL I +G FSLG VT L + +G V +S+ Sbjct: 1 MTWFVSTLKAYPEIAIFLALGIGYWVGGKSYKGFSLGAVTSTLLVAIVIGILG-VKISAN 59 Query: 54 TKSFLFLLFLFGVGYSVGPQFVLAMKRDGLKPMLIAVVVSLTGLAAAIVVARALRLDPGF 113 KS FL+FLF VGY VGPQFV + +DG+ + A +VS+ LAA IV A D G Sbjct: 60 VKSVFFLMFLFAVGYGVGPQFVRGIAKDGIPQAIFAAIVSVLCLAAPIVAAMVAGYDLGS 119 Query: 114 AAGLLSGALSQSAAMGTATDAVNSLPVSEAERALFVSHIAVADAVCYIFGYAGVITFCTI 173 AAGL +G+ + SA+MG ATDA+N L S E + + +A AV YIFG G Sbjct: 120 AAGLFAGSQTISASMGLATDAINRLGRSPEETKQLLDGMPIAYAVTYIFGTVGSAIILAQ 179 Query: 174 VVPALLKIDLKTEALKLEQALGITRAKPGLASAWRKFELRAYRLDAHAAIVGLTVAATEA 233 + P LL IDL EQ LG G + W +FELRAY L H+ +G +VA EA Sbjct: 180 IGPKLLGIDLVAACKDYEQQLG--AGADGEGTEWHEFELRAYALAPHSPYIGKSVAELEA 237 Query: 234 RV-PGQRVFIHRIRRGERILEAEPATVLAAGDVVALSAPRQIIVELIGPRGEEVEDRELL 292 G R FI RIRRG +I+EA+ TVL GD+VA+ R ++ +GP G EVED ELL Sbjct: 238 STAEGVRAFIERIRRGGKIIEAQLDTVLEPGDIVAIGGKRDQLIARLGPSGREVEDSELL 297 Query: 293 DIPVVAADVFLINTKLAGSSLQQASEQDWTRGLYLRSVSRG--GEALPIAAGTVLERGDL 350 ++ D+++ N ++ G +LQ+ + RG++L+ + RG +P+ T L RGD+ Sbjct: 298 NVQTEGVDIYITNKEVDGHTLQEMARWPGARGIFLKKIKRGPTETVIPVLPKTKLYRGDV 357 Query: 351 LRIVGPEAVVQNAAKNIGVIVAPSTTIDFVVLGLAIFLGGLVGVLVSFSVGGVTISLSTS 410 + +VG + AK++G I P+T D + LAI +G L+G +V +V G+ +++ST+ Sbjct: 358 ITVVGRTQDINATAKHVGYIDRPTTVTDVAFVSLAITVGALIGAVV-INVSGIPLTISTA 416 Query: 411 VGTLLAGLLVGYLRTRLPYFGRIPDGAISLMTSLGLAAFVGLTGIHAGPIFLAAIRESGI 470 G L+AG++ G+ R P FGRIP+ + M S+GL F+ + GI AGP F+A +++ G+ Sbjct: 417 GGALIAGIIFGWYRAIHPTFGRIPEPTLWFMNSVGLNVFIAVVGISAGPGFIAGLQKLGV 476 Query: 471 GLLLGGMIVTLLPQIVGFCFGHFVLRMNPILLLGALTGAQTVTAAMAAIQERSGSSVVVL 530 L L G+ T +P I+G +V R +P L+LG GA+T TAA+ I E + S V L Sbjct: 477 SLFLWGIFATSIPLIIGMYLAKYVFRFHPALVLGVCAGARTTTAALGMICETAKSQVPGL 536 Query: 531 GYTPAYPISNILLTTWGSVMVVVFA 555 GYT Y + N LLT WG V++++ + Sbjct: 537 GYTVTYAVGNTLLTIWGMVVIMILS 561 >gb|EGP44950.1| aspartate:alanine antiporter family protein 1 [Achromobacter xylosoxidans AXX-A] Length = 563 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 231/565 (40%), Positives = 327/565 (57%), Gaps = 16/565 (2%) Query: 1 LTWLAQFLVRYPELALFLVI-------AAXIGAFSLGPVTGALFAGLAVGDFAHVPVSSM 53 + W L +YPELA+FL + A I F+LG VTG L G+ VG + ++ + Sbjct: 1 MEWFFDTLRKYPELAIFLTLGLGYWIGAKKIFGFNLGAVTGTLLVGVLVGQL-DITIAPI 59 Query: 54 TKSFLFLLFLFGVGYSVGPQFVLAMKRDGLKPMLIAVVVSLTGLAAAIVVARALRLDPGF 113 K FLLFLFG+GY VGPQF MK DGL ++ AVV+ + L A D G Sbjct: 60 VKQVFFLLFLFGLGYGVGPQFFRGMKSDGLPQVIFAVVICVICLLVTWGTAVGFGFDAGT 119 Query: 114 AAGLLSGALSQSAAMGTATDAVNSLPVSEAERALFVSHIAVADAVCYIFGYAGVITFCTI 173 AGLLSGA + SA MG ATD +N L + A + ++ I VA AVCYIFG G Sbjct: 120 GAGLLSGAQTISAVMGVATDTINGLGIDAATKKKWIDSIPVAYAVCYIFGTVGSAWLLAS 179 Query: 174 VVPALLKIDLKTEALKLEQALGITRAKPGLASAWRKFELRAYRLDAHAAIVGLTVAATEA 233 + P L+++D+ E + E + A S +RKF RAY+LD H VG TV E+ Sbjct: 180 LGPKLMRVDIVKECKEYEAKMS-GGADSMELSGYRKFTARAYKLD-HPEFVGKTVGELES 237 Query: 234 RVPGQRVFIHRIRRGERILEAEPATVLAAGDVVALSAPRQ-IIVELIGPRGEEVEDRELL 292 R RVF+ RIRRG++I++ + TVL AGDV+ ++ ++++ G G EVEDR+LL Sbjct: 238 RFVEARVFVERIRRGDQIIDNDSTTVLQAGDVLGVTGRHDALVLQAAGIIGVEVEDRDLL 297 Query: 293 DIPVVAADVFLINTKLAGSSLQQASEQDWTR----GLYLRSVSRGGEALPIAAGTVLERG 348 ++P +V L N LAG ++++ SE + R G++LR V RGG +P+ G L+RG Sbjct: 298 NLPAEIIEVVLTNKNLAGKTVKEISEMESVRQLGRGVFLRKVVRGGHEMPVNWGLKLDRG 357 Query: 349 DLLRIVGPEAVVQNAAKNIGVIVAPSTTIDFVVLGLAIFLGGLVGVLVSFSVGGVTISLS 408 D L I+G + V+ +G + + D V +G I LGGL G LV +VGG+ I+LS Sbjct: 358 DRLFILGAKRDVERVVGKVGYVDRATEQTDMVFVGFGILLGGLFGTLV-LTVGGIPITLS 416 Query: 409 TSVGTLLAGLLVGYLRTRLPYFGRIPDGAISLMTSLGLAAFVGLTGIHAGPIFLAAIRES 468 TS G+L+AGL+ GYLR+ P FGR+P+ +TS+GL AFV + GI +GP F+ ++ Sbjct: 417 TSGGSLIAGLIFGYLRSVHPTFGRVPEPVHWFLTSVGLTAFVAVVGISSGPGFVQGFQQL 476 Query: 469 GIGLLLGGMIVTLLPQIVGFCFGHFVLRMNPILLLGALTGAQTVTAAMAAIQERSGSSVV 528 G L + G+I T +P I+G +V + +P ++LG GA+T TAA+ I E + S V Sbjct: 477 GAKLFIAGIIATSIPMILGVYIARYVFKFHPAIVLGVCAGARTTTAAIGQITETAKSQVP 536 Query: 529 VLGYTPAYPISNILLTTWGSVMVVV 553 LGYT Y I N LL WG V+V++ Sbjct: 537 ALGYTVPYAIGNTLLIIWGIVIVML 561 >gb|EFV83460.1| YidE/YbjL duplication [Achromobacter xylosoxidans C54] Length = 563 Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust. Identities = 230/565 (40%), Positives = 329/565 (58%), Gaps = 16/565 (2%) Query: 1 LTWLAQFLVRYPELALFLVI-------AAXIGAFSLGPVTGALFAGLAVGDFAHVPVSSM 53 + WL L +YPELA+FL + A I F+LG VTG L G+ VG ++ ++ + Sbjct: 1 MEWLFDTLRKYPELAIFLTLGLGYWIGAKKIFGFNLGAVTGTLLVGVLVGQL-NITIAPI 59 Query: 54 TKSFLFLLFLFGVGYSVGPQFVLAMKRDGLKPMLIAVVVSLTGLAAAIVVARALRLDPGF 113 K FLLFLFG+GY VGPQF MK DGL ++ AV++ + L A D G Sbjct: 60 VKQVFFLLFLFGLGYGVGPQFFRGMKSDGLPQVIFAVIICVICLLVTWGTAVGFGFDAGT 119 Query: 114 AAGLLSGALSQSAAMGTATDAVNSLPVSEAERALFVSHIAVADAVCYIFGYAGVITFCTI 173 AGLLSGA + SA MG ATD +N L + A + ++ I VA AVCYIFG G Sbjct: 120 GAGLLSGAQTISAVMGVATDTINGLGIDAATKKKWIDSIPVAYAVCYIFGTVGSAWLLAS 179 Query: 174 VVPALLKIDLKTEALKLEQALGITRAKPGLASAWRKFELRAYRLDAHAAIVGLTVAATEA 233 + P L+++D+ E + E + A S +RKF RAY+LD H + G TV E+ Sbjct: 180 LGPKLMRVDIVKECKEYEAKMS-GGADSMELSGYRKFISRAYKLD-HPELAGKTVGELES 237 Query: 234 RVPGQRVFIHRIRRGERILEAEPATVLAAGDVVALSAPRQ-IIVELIGPRGEEVEDRELL 292 R RVFI RIRRG++IL+ + TVL AGDV+ ++ ++++ G G EVEDR+L+ Sbjct: 238 RFVEARVFIERIRRGDQILDTDSTTVLQAGDVLGVAGRHDALVLQAAGIIGTEVEDRDLI 297 Query: 293 DIPVVAADVFLINTKLAGSSLQQASEQDWTR----GLYLRSVSRGGEALPIAAGTVLERG 348 ++P +V L N LAG ++++ +E + R G++LR V RGG +P+ G L+RG Sbjct: 298 NLPAEIVEVVLTNKNLAGKTVKEIAEMEQVRELGRGVFLRKVVRGGHEMPVNWGLKLDRG 357 Query: 349 DLLRIVGPEAVVQNAAKNIGVIVAPSTTIDFVVLGLAIFLGGLVGVLVSFSVGGVTISLS 408 D L I+G + V+ +G + + D V +G I LGGL G LV +VGG+ I+LS Sbjct: 358 DRLFILGAKRDVERVVGKVGYVDRATEQTDMVFVGFGILLGGLFGTLV-LTVGGIPITLS 416 Query: 409 TSVGTLLAGLLVGYLRTRLPYFGRIPDGAISLMTSLGLAAFVGLTGIHAGPIFLAAIRES 468 TS G+L+AGL+ GYLR+ P FGR+P+ +TS+GL AFV + GI +GP F+ ++ Sbjct: 417 TSGGSLIAGLIFGYLRSVHPTFGRVPEPVHWFLTSVGLTAFVAVVGISSGPGFVQGFQQL 476 Query: 469 GIGLLLGGMIVTLLPQIVGFCFGHFVLRMNPILLLGALTGAQTVTAAMAAIQERSGSSVV 528 G L + G+I T +P I+G +V + +P ++LG GA+T TAA+ I E + S V Sbjct: 477 GAKLFIAGIIATSVPMILGVYIARYVFKFHPAIVLGVCAGARTTTAAIGQITETAKSQVP 536 Query: 529 VLGYTPAYPISNILLTTWGSVMVVV 553 LGYT Y I N LL WG V+V++ Sbjct: 537 ALGYTVPYAIGNTLLIIWGIVIVML 561