BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0075.0062.p (563 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770116.1| hypothetical protein bll3476 [Bradyrhizobium ja... 976 0.0 ref|YP_001768521.1| YidE/YbjL duplication [Methylobacterium sp. ... 895 0.0 ref|ZP_02881408.1| YidE/YbjL duplication [Burkholderia graminis ... 769 0.0 ref|YP_584133.1| putative transporter [Cupriavidus metallidurans... 741 0.0 ref|NP_717744.1| hypothetical protein SO_2143 [Shewanella oneide... 697 0.0 >ref|NP_770116.1| hypothetical protein bll3476 [Bradyrhizobium japonicum USDA 110] sp|Q89PK4.1|Y3476_BRAJA RecName: Full=Uncharacterized transporter bll3476 dbj|BAC48741.1| hypothetical membrane protein [Bradyrhizobium japonicum USDA 110] Length = 567 Score = 976 bits (2523), Expect = 0.0, Method: Compositional matrix adjust. Identities = 501/563 (88%), Positives = 536/563 (95%) Query: 1 MIDWLFQTLRTYPEIAIFLSLALGYYFGSFTYKGLGLGAVTATLVAAVIIGQIGITISGP 60 MIDW F TL++YPEIAIFLSLALGYYFGSFTYKGLGLGAVTATL+AAVIIGQIGITI+GP Sbjct: 5 MIDWFFHTLKSYPEIAIFLSLALGYYFGSFTYKGLGLGAVTATLIAAVIIGQIGITITGP 64 Query: 61 LKPFFFLMFLFAIGYGVGPQFVRGIAQDGVPQAVFAAVVCVFCLLSAYLGAKLAGYDVGS 120 LKPFFFLMFLFAIGYGVGPQFVRGIAQDGVPQA+FAAVVCVFCLL+ Y+ AK+AGYDVGS Sbjct: 65 LKPFFFLMFLFAIGYGVGPQFVRGIAQDGVPQAIFAAVVCVFCLLAPYVAAKIAGYDVGS 124 Query: 121 AIGLYAGSQTISASMGLATDAINRLGLPADEAKKLLDAMPVAYAVTYIFGTVGSAIVLAL 180 A GLYAGSQTISASMGLATDAINRLGL +E KK+LD MPVAYAVTYIFGTVGSAIVLAL Sbjct: 125 AAGLYAGSQTISASMGLATDAINRLGLSPEETKKILDGMPVAYAVTYIFGTVGSAIVLAL 184 Query: 181 LGPALLGIDLEAACKKYEEEHGGKKELGGPGTAWHQFDLRAYRVSERGPVVGKTVEQAEA 240 LGPALLGIDLEAACK+YEEE+GGKK+LGGPGTAWHQFD+RA+RV ERGP VGKTV++AEA Sbjct: 185 LGPALLGIDLEAACKRYEEEYGGKKQLGGPGTAWHQFDVRAFRVRERGPAVGKTVQEAEA 244 Query: 241 LIPDHRIFVLRLRRGGKIVEATSDTVIHAGDVVAVAGRRDVLVQLIGEQAEEVDDRELLA 300 LIPD R+F+LRLR+ GKIV+ATSD VIHAGDVVAVAGRRDVLVQLIGEQAEEVDDRELLA Sbjct: 245 LIPDQRVFILRLRQEGKIVDATSDAVIHAGDVVAVAGRRDVLVQLIGEQAEEVDDRELLA 304 Query: 301 VPIEGVDVYVTSKDVDGKTLEQLAKEPGARGVFLRRIARGAIATEIPILPNTKINRGDIL 360 +PIEGVDVYVTSKDVD KTLEQLAK P ARGVFLR+I RGAIA EIPILPNTK+NRGDI+ Sbjct: 305 MPIEGVDVYVTSKDVDSKTLEQLAKAPAARGVFLRKITRGAIAVEIPILPNTKLNRGDIV 364 Query: 361 TLVGRTSDVAATTRLLGRPDRATDVADVAFIGAAIAIGALVGAFVYKIGSVPLTLSTSGG 420 T+VGRT DVAA T++LGRPDRATD+ADVAFIGAAIAIGALVGA VYKIGSVPLTLSTSGG Sbjct: 365 TIVGRTPDVAAATKMLGRPDRATDMADVAFIGAAIAIGALVGAIVYKIGSVPLTLSTSGG 424 Query: 421 ALISGLFFGWLRSVHPTFGRIPSPTVWFMNSVGLNVFIAVVGISSGPGFVAGLQKLGFSL 480 ALISGLFFGWLRSV PTFGRIPSPTVWFMNSVGLNVFIA+VGISSGPGFVAGL+ LGF L Sbjct: 425 ALISGLFFGWLRSVRPTFGRIPSPTVWFMNSVGLNVFIAIVGISSGPGFVAGLKALGFGL 484 Query: 481 FLWGVVVTTVPLILAMFVGKYVFRFHDAILLGCCSGARTTTASLGMINDRAKSQIPGLGY 540 FLWGVV TT PLILAM+VGKYVFRFHDAI+LGCCSGARTTTASLGM+NDRAKSQIPGLGY Sbjct: 485 FLWGVVATTAPLILAMYVGKYVFRFHDAIVLGCCSGARTTTASLGMVNDRAKSQIPGLGY 544 Query: 541 TVTYAVGNTLLTIWGMVLVMMMT 563 TVTYAVGNTLLTIWGMVLVM+MT Sbjct: 545 TVTYAVGNTLLTIWGMVLVMLMT 567 >ref|YP_001768521.1| YidE/YbjL duplication [Methylobacterium sp. 4-46] gb|ACA16087.1| YidE/YbjL duplication [Methylobacterium sp. 4-46] Length = 563 Score = 895 bits (2312), Expect = 0.0, Method: Compositional matrix adjust. Identities = 432/563 (76%), Positives = 497/563 (88%) Query: 1 MIDWLFQTLRTYPEIAIFLSLALGYYFGSFTYKGLGLGAVTATLVAAVIIGQIGITISGP 60 M DW TLR YPEIAIF++LA GYYFGSFTYKGLG+GAVTATL+AAV+IGQIGI+++GP Sbjct: 1 MFDWFANTLRQYPEIAIFIALAFGYYFGSFTYKGLGIGAVTATLIAAVVIGQIGISVTGP 60 Query: 61 LKPFFFLMFLFAIGYGVGPQFVRGIAQDGVPQAVFAAVVCVFCLLSAYLGAKLAGYDVGS 120 LKPFFFLMFLFAIGY VGPQFVRG+AQDG+PQA+FA +VCVFCL YL A+ GYD GS Sbjct: 61 LKPFFFLMFLFAIGYAVGPQFVRGVAQDGLPQALFAVIVCVFCLAGGYLAARFGGYDAGS 120 Query: 121 AIGLYAGSQTISASMGLATDAINRLGLPADEAKKLLDAMPVAYAVTYIFGTVGSAIVLAL 180 A GLYAGSQTISASMGLATDAINRL +PA++AK LLDAMPVAYA+TYIFGT+GSA+++AL Sbjct: 121 AAGLYAGSQTISASMGLATDAINRLPIPAEQAKALLDAMPVAYAITYIFGTLGSAVIIAL 180 Query: 181 LGPALLGIDLEAACKKYEEEHGGKKELGGPGTAWHQFDLRAYRVSERGPVVGKTVEQAEA 240 LGPALLGIDLEAACK+YEE+ GG K GGPGTAWHQFDLRAYRV G +VGKT +AE Sbjct: 181 LGPALLGIDLEAACKRYEEKRGGTKVAGGPGTAWHQFDLRAYRVRPDGIIVGKTAAEAER 240 Query: 241 LIPDHRIFVLRLRRGGKIVEATSDTVIHAGDVVAVAGRRDVLVQLIGEQAEEVDDRELLA 300 ++P+ R+++ RLRRG +++ T+DTVI AGDVVAVAGRR+VLV LIG AEEVDDRELLA Sbjct: 241 MVPEQRLYIERLRRGANVMDVTADTVIQAGDVVAVAGRREVLVGLIGAAAEEVDDRELLA 300 Query: 301 VPIEGVDVYVTSKDVDGKTLEQLAKEPGARGVFLRRIARGAIATEIPILPNTKINRGDIL 360 VP+EG+DVYVTS++VDGK+L +LA+ P ARGVFLR+I RGA A +IPILP+T+INRGDIL Sbjct: 301 VPVEGLDVYVTSREVDGKSLAELAQSPWARGVFLRKITRGATAIDIPILPSTRINRGDIL 360 Query: 361 TLVGRTSDVAATTRLLGRPDRATDVADVAFIGAAIAIGALVGAFVYKIGSVPLTLSTSGG 420 TLVGRT DV+A T+ +G PDRATDVADV FIGAAIAIGALVGA VY +G VPLTLSTSGG Sbjct: 361 TLVGRTQDVSAATKAIGHPDRATDVADVMFIGAAIAIGALVGAVVYTVGGVPLTLSTSGG 420 Query: 421 ALISGLFFGWLRSVHPTFGRIPSPTVWFMNSVGLNVFIAVVGISSGPGFVAGLQKLGFSL 480 ALISGLFFGWLRSV P FGRIPS TVWFMNSVGLNVFIA+VGISSGP FVAGLQ+LG+ + Sbjct: 421 ALISGLFFGWLRSVRPMFGRIPSSTVWFMNSVGLNVFIAIVGISSGPKFVAGLQQLGYGI 480 Query: 481 FLWGVVVTTVPLILAMFVGKYVFRFHDAILLGCCSGARTTTASLGMINDRAKSQIPGLGY 540 FLWG+ TT+PLILA++ GKY+FRF DAILLG +GARTTTA+LGM+ DRAKSQIPGLGY Sbjct: 481 FLWGIFATTLPLILALYAGKYLFRFDDAILLGAVAGARTTTAALGMVTDRAKSQIPGLGY 540 Query: 541 TVTYAVGNTLLTIWGMVLVMMMT 563 TVTYAV NT LTIWGMVLVM++T Sbjct: 541 TVTYAVSNTFLTIWGMVLVMLLT 563 >ref|ZP_02881408.1| YidE/YbjL duplication [Burkholderia graminis C4D1M] gb|EDT12837.1| YidE/YbjL duplication [Burkholderia graminis C4D1M] Length = 563 Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/563 (66%), Positives = 463/563 (82%), Gaps = 1/563 (0%) Query: 2 IDWLFQTLRTYPEIAIFLSLALGYYFGSFTYKGLGLGAVTATLVAAVIIGQIGITISGPL 61 + WL +TLR+YPEIAIFLSL +GY+ G ++KG LGAVTATL+AA+ IGQ+GIT+S + Sbjct: 1 MSWLSETLRSYPEIAIFLSLGIGYWVGGKSFKGFSLGAVTATLLAAIAIGQLGITVSPNV 60 Query: 62 KPFFFLMFLFAIGYGVGPQFVRGIAQDGVPQAVFAAVVCVFCLLSAYLGAKLAGYDVGSA 121 K FFLMFLFA+GYGVGPQFVRGIA+DG+PQA+F+ V C+ CL + + AK+AGY +GSA Sbjct: 61 KSVFFLMFLFAVGYGVGPQFVRGIAKDGIPQALFSVVQCLLCLAAPVVAAKVAGYSIGSA 120 Query: 122 IGLYAGSQTISASMGLATDAINRLGLPADEAKKLLDAMPVAYAVTYIFGTVGSAIVLALL 181 GL AGSQTISASMGLATDAINRLGLPADE+K LL+AMP AYAVTYIFGT+GSA++LA L Sbjct: 121 AGLLAGSQTISASMGLATDAINRLGLPADESKALLNAMPTAYAVTYIFGTIGSALILATL 180 Query: 182 GPALLGIDLEAACKKYEEEHGGKKELGGPGTAWHQFDLRAYRVSERGPVVGKTVEQAEAL 241 GP LL IDL AACK+YE G +ELGG G AWH+F+ RAYRV GP G TV QAE + Sbjct: 181 GPRLLRIDLVAACKEYEASLGATRELGGAGQAWHKFEFRAYRVQSNGPAAGLTVAQAETM 240 Query: 242 IP-DHRIFVLRLRRGGKIVEATSDTVIHAGDVVAVAGRRDVLVQLIGEQAEEVDDRELLA 300 + R+F+ R+RR G+I +AT D V+ D+VAVAGRR+ LV IG A E+DD +LLA Sbjct: 241 AAVNSRLFIERIRRDGQIRDATLDLVLQPDDIVAVAGRREQLVNAIGPAALEIDDPDLLA 300 Query: 301 VPIEGVDVYVTSKDVDGKTLEQLAKEPGARGVFLRRIARGAIATEIPILPNTKINRGDIL 360 VP+EGVD+YVTSK +D KTL++L+ P ARGVFLR+I RG T IPILPNT+++RGD++ Sbjct: 301 VPVEGVDIYVTSKAIDNKTLQELSTLPAARGVFLRKIKRGPTETPIPILPNTRLHRGDVI 360 Query: 361 TLVGRTSDVAATTRLLGRPDRATDVADVAFIGAAIAIGALVGAFVYKIGSVPLTLSTSGG 420 T+VGRT D A +G DR+T VAD+AF+ AIA+GAL+GA V ++G++P+TLST+GG Sbjct: 361 TVVGRTQDTTAAAEAIGVLDRSTSVADMAFVSLAIAVGALIGAVVIRVGAIPITLSTAGG 420 Query: 421 ALISGLFFGWLRSVHPTFGRIPSPTVWFMNSVGLNVFIAVVGISSGPGFVAGLQKLGFSL 480 ALI+G+ FGW R++HPTFGRIP PT+WFMNSVGLNVFIAVVGI++GPGFVAGLQ+LG SL Sbjct: 421 ALIAGIAFGWFRAIHPTFGRIPEPTIWFMNSVGLNVFIAVVGITAGPGFVAGLQQLGVSL 480 Query: 481 FLWGVVVTTVPLILAMFVGKYVFRFHDAILLGCCSGARTTTASLGMINDRAKSQIPGLGY 540 FLWG+V T+VPLIL MF+ KY+F+FH A+L G C+GARTTTA+LGM+ D AKSQ+PGLGY Sbjct: 481 FLWGIVATSVPLILGMFIAKYIFKFHPALLFGICAGARTTTAALGMVCDAAKSQVPGLGY 540 Query: 541 TVTYAVGNTLLTIWGMVLVMMMT 563 TVTYAVGNTLLTIWGMV+V++++ Sbjct: 541 TVTYAVGNTLLTIWGMVIVIVLS 563 >ref|YP_584133.1| putative transporter [Cupriavidus metallidurans CH34] gb|ABF08864.1| putative transporter [Cupriavidus metallidurans CH34] Length = 561 Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/563 (62%), Positives = 452/563 (80%), Gaps = 3/563 (0%) Query: 2 IDWLFQTLRTYPEIAIFLSLALGYYFGSFTYKGLGLGAVTATLVAAVIIGQIGITISGPL 61 + W TL+ YPEIAIFL+L +GY+ G +YKG LGAVT+TL+ A++IG +G+ IS + Sbjct: 1 MTWFVSTLKAYPEIAIFLALGIGYWVGGKSYKGFSLGAVTSTLLVAIVIGILGVKISANV 60 Query: 62 KPFFFLMFLFAIGYGVGPQFVRGIAQDGVPQAVFAAVVCVFCLLSAYLGAKLAGYDVGSA 121 K FFLMFLFA+GYGVGPQFVRGIA+DG+PQA+FAA+V V CL + + A +AGYD+GSA Sbjct: 61 KSVFFLMFLFAVGYGVGPQFVRGIAKDGIPQAIFAAIVSVLCLAAPIVAAMVAGYDLGSA 120 Query: 122 IGLYAGSQTISASMGLATDAINRLGLPADEAKKLLDAMPVAYAVTYIFGTVGSAIVLALL 181 GL+AGSQTISASMGLATDAINRLG +E K+LLD MP+AYAVTYIFGTVGSAI+LA + Sbjct: 121 AGLFAGSQTISASMGLATDAINRLGRSPEETKQLLDGMPIAYAVTYIFGTVGSAIILAQI 180 Query: 182 GPALLGIDLEAACKKYEEEHGGKKELGGPGTAWHQFDLRAYRVSERGPVVGKTVEQAEAL 241 GP LLGIDL AACK YE++ G + G GT WH+F+LRAY ++ P +GK+V + EA Sbjct: 181 GPKLLGIDLVAACKDYEQQLGAGAD--GEGTEWHEFELRAYALAPHSPYIGKSVAELEAS 238 Query: 242 IPDH-RIFVLRLRRGGKIVEATSDTVIHAGDVVAVAGRRDVLVQLIGEQAEEVDDRELLA 300 + R F+ R+RRGGKI+EA DTV+ GD+VA+ G+RD L+ +G EV+D ELL Sbjct: 239 TAEGVRAFIERIRRGGKIIEAQLDTVLEPGDIVAIGGKRDQLIARLGPSGREVEDSELLN 298 Query: 301 VPIEGVDVYVTSKDVDGKTLEQLAKEPGARGVFLRRIARGAIATEIPILPNTKINRGDIL 360 V EGVD+Y+T+K+VDG TL+++A+ PGARG+FL++I RG T IP+LP TK+ RGD++ Sbjct: 299 VQTEGVDIYITNKEVDGHTLQEMARWPGARGIFLKKIKRGPTETVIPVLPKTKLYRGDVI 358 Query: 361 TLVGRTSDVAATTRLLGRPDRATDVADVAFIGAAIAIGALVGAFVYKIGSVPLTLSTSGG 420 T+VGRT D+ AT + +G DR T V DVAF+ AI +GAL+GA V + +PLT+ST+GG Sbjct: 359 TVVGRTQDINATAKHVGYIDRPTTVTDVAFVSLAITVGALIGAVVINVSGIPLTISTAGG 418 Query: 421 ALISGLFFGWLRSVHPTFGRIPSPTVWFMNSVGLNVFIAVVGISSGPGFVAGLQKLGFSL 480 ALI+G+ FGW R++HPTFGRIP PT+WFMNSVGLNVFIAVVGIS+GPGF+AGLQKLG SL Sbjct: 419 ALIAGIIFGWYRAIHPTFGRIPEPTLWFMNSVGLNVFIAVVGISAGPGFIAGLQKLGVSL 478 Query: 481 FLWGVVVTTVPLILAMFVGKYVFRFHDAILLGCCSGARTTTASLGMINDRAKSQIPGLGY 540 FLWG+ T++PLI+ M++ KYVFRFH A++LG C+GARTTTA+LGMI + AKSQ+PGLGY Sbjct: 479 FLWGIFATSIPLIIGMYLAKYVFRFHPALVLGVCAGARTTTAALGMICETAKSQVPGLGY 538 Query: 541 TVTYAVGNTLLTIWGMVLVMMMT 563 TVTYAVGNTLLTIWGMV++M+++ Sbjct: 539 TVTYAVGNTLLTIWGMVVIMILS 561 >ref|NP_717744.1| hypothetical protein SO_2143 [Shewanella oneidensis MR-1] sp|Q8EF50.1|Y2143_SHEON RecName: Full=Uncharacterized transporter SO_2143 gb|AAN55188.1|AE015656_5 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 562 Score = 697 bits (1798), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/564 (60%), Positives = 432/564 (76%), Gaps = 4/564 (0%) Query: 2 IDWLFQTLRTYPEIAIFLSLALGYYFGSFTYKGLGLGAVTATLVAAVIIGQIGITISGPL 61 ++WL TL+ YPEIA+FLSLA+GY+ G+ T+KG LGAVTATL+AAV+IGQ IT+S + Sbjct: 1 MNWLKTTLQIYPEIAVFLSLAIGYWVGNKTFKGFSLGAVTATLLAAVVIGQFDITLSSNV 60 Query: 62 KPFFFLMFLFAIGYGVGPQFVRGIAQDGVPQAVFAAVVCVFCLLSAYLGAKLAGYDVGSA 121 K FFLMFLFA+GYG+GPQFV+GIA+DG+PQA+FA V C+F LL L AK+AGYD+G+ Sbjct: 61 KSIFFLMFLFAVGYGIGPQFVQGIAKDGLPQALFAVVACLFSLLFPILCAKIAGYDLGAT 120 Query: 122 IGLYAGSQTISASMGLATDAINRLGLPADEAKKLLDAMPVAYAVTYIFGTVGSAIVLALL 181 G +AG+QTISASMGLATDAI L LPA+E+KK+ +PVAYAVTYIFGTVGSAIVLA + Sbjct: 121 AGFFAGTQTISASMGLATDAIVHLDLPAEESKKMFSVIPVAYAVTYIFGTVGSAIVLAQI 180 Query: 182 GPALLGIDLEAACKKYEEEHGGKKELGGPGTAWHQFDLRAYRVSERGPVVGKTVEQAEAL 241 P LL IDLEAACK Y ++GG E WH + LR+Y+++E+ VG T+ + EA Sbjct: 181 IPKLLRIDLEAACKDYMAKNGGTTE--NARGEWHTYALRSYKLTEKNRAVGMTIHEFEAQ 238 Query: 242 IPDHRIFVLRLRRGGKIVEATSDTVIHAGDVVAVAGRRDVLVQLIG--EQAEEVDDRELL 299 P ++FV LR GK+++ ++ + GD++AV G D V+ + +E D ELL Sbjct: 239 FPHRKVFVEGLRHEGKVIDTDPNSKLSTGDIIAVGGEYDAFVEFFDHPDSFDETQDSELL 298 Query: 300 AVPIEGVDVYVTSKDVDGKTLEQLAKEPGARGVFLRRIARGAIATEIPILPNTKINRGDI 359 P+ GVDVYVTS+ ++GKTL +L K + G+FLR+I RG A EIPILP T++ RGDI Sbjct: 299 NQPVLGVDVYVTSRGINGKTLAELGKTTSSHGIFLRKIKRGPKAIEIPILPQTRLFRGDI 358 Query: 360 LTLVGRTSDVAATTRLLGRPDRATDVADVAFIGAAIAIGALVGAFVYKIGSVPLTLSTSG 419 LTL G T DV T+ LG D+ + DVAF AI IGAL+G+ V+KIG++PLTLST+G Sbjct: 359 LTLSGLTKDVERVTKQLGVIDQRGNSMDVAFWAFAIVIGALLGSLVFKIGNLPLTLSTAG 418 Query: 420 GALISGLFFGWLRSVHPTFGRIPSPTVWFMNSVGLNVFIAVVGISSGPGFVAGLQKLGFS 479 G LI+GL F W+RS HPTFG +P PTVWFMNSVGLNVFIA +GIS+GP FVAGL++LGFS Sbjct: 419 GVLIAGLIFSWVRSFHPTFGWVPEPTVWFMNSVGLNVFIAAIGISAGPNFVAGLKELGFS 478 Query: 480 LFLWGVVVTTVPLILAMFVGKYVFRFHDAILLGCCSGARTTTASLGMINDRAKSQIPGLG 539 LFLWGVV TT+PL A VGKYVF+FH AILLGCC+GARTTTASLGMIN++AKS IP LG Sbjct: 479 LFLWGVVATTLPLFFAALVGKYVFKFHPAILLGCCAGARTTTASLGMINEKAKSNIPSLG 538 Query: 540 YTVTYAVGNTLLTIWGMVLVMMMT 563 YT+TYAVGNTLLT+WG+VL++++T Sbjct: 539 YTITYAVGNTLLTMWGLVLILILT 562