BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0075.0050.p (411 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_576209.1| hypothetical protein Nham_0885 [Nitrobacter ham... 551 e-155 ref|NP_770126.1| hypothetical protein blr3486 [Bradyrhizobium ja... 546 e-153 ref|ZP_01048408.1| hypothetical protein NB311A_16474 [Nitrobacte... 536 e-150 ref|ZP_01048274.1| hypothetical protein NB311A_08854 [Nitrobacte... 335 1e-89 ref|NP_771815.1| hypothetical protein bll5175 [Bradyrhizobium ja... 285 1e-74 >ref|YP_576209.1| hypothetical protein Nham_0885 [Nitrobacter hamburgensis X14] gb|ABE61749.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 541 Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust. Identities = 270/356 (75%), Positives = 302/356 (84%), Gaps = 6/356 (1%) Query: 8 MFRWGKTLLAVVLVSVTSVAATAQTADKPPAQASQPAAAT-TQPADQLLKPEQLEALVAP 66 MFR GKTL+ + L+ VA +AQTAD PP +S P AT + P +LLKPEQLEAL +P Sbjct: 1 MFRCGKTLITLALLMANPVAVSAQTADNPPGPSSTPQLATKSLPGAELLKPEQLEALASP 60 Query: 67 IALYPDSLLANVLAASTYPLEVVQADRWLKERKSLKGDALKAEVDKQAWDDSVKALASTA 126 IALYPD LLANVLAASTYPLEVVQADRWLKERK+LKGDALK EV+KQ+WD+SVKAL+ST Sbjct: 61 IALYPDELLANVLAASTYPLEVVQADRWLKERKTLKGDALKKEVEKQSWDNSVKALSSTP 120 Query: 127 DVLAMMSDKIDWTKNLGDAVLAQQPDVMDAIQRLRSKAQANNKLVTTKQQKVSVQTQESK 186 DV++MMSDKI+WTK LGDAVLAQQ DVMDAIQRLRSKA + KLVTTKQQKVSVQTQE+K Sbjct: 121 DVISMMSDKINWTKGLGDAVLAQQADVMDAIQRLRSKAYDSKKLVTTKQQKVSVQTQENK 180 Query: 187 QVIVIEQTDPNTVYVPYYDPATVYGAWPYADYPPYYFGYPSYIGAGVIAAGLAFGAGWAI 246 Q IVIE T P+T+YVPYYDPA VYG WPYA+YPPYYFGYPSYIGAGVIA GLAFG WAI Sbjct: 181 QAIVIESTSPDTMYVPYYDPAAVYGTWPYAEYPPYYFGYPSYIGAGVIATGLAFGTAWAI 240 Query: 247 GRWGNYWGGGFNWGNRNVYVNNFNRVNNIGNSWQHNPAHRQGVRYNNSNVQQRFGGNANR 306 GRWGNYWGGGFNWGNRN+YVN+ NR+N+ GN+WQHNPAHRQGVRYNN+NVQQRFG N + Sbjct: 241 GRWGNYWGGGFNWGNRNLYVNHHNRINSAGNNWQHNPAHRQGVRYNNANVQQRFGNNNLK 300 Query: 307 AGASDRMDFRGRDGQQVLKPGGDRPGADRAGDRAGDRGDRAGDRAGDRAGDRGGDK 362 AGAS+RMDFRGRDGQQVL+PG DRPG GDRA GDRAGDRA R GG++ Sbjct: 301 AGASNRMDFRGRDGQQVLRPGQDRPG---GGDRA--VGDRAGDRAASRDRPGGGNR 351 >ref|NP_770126.1| hypothetical protein blr3486 [Bradyrhizobium japonicum USDA 110] dbj|BAC48751.1| blr3486 [Bradyrhizobium japonicum USDA 110] Length = 558 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 284/371 (76%), Positives = 309/371 (83%), Gaps = 10/371 (2%) Query: 1 LVSMEVAMFRWGKTLLAVVLVSVTSVAATAQTADKPPAQASQPAAATTQP-ADQLLKPEQ 59 + ME M R +T++A+ L+ A+AQTADKP A +QP AA+ P + +LLKPEQ Sbjct: 1 MTPMEDVMLRCARTVIALALLMAIPSVASAQTADKPAAPTAQPQAASQAPPSAELLKPEQ 60 Query: 60 LEALVAPIALYPDSLLANVLAASTYPLEVVQADRWLKERKSLKGDALKAEVDKQAWDDSV 119 LEALVAPIALYPD LLANVLAASTYPLEVVQADRWLKE KSLKGDALK EV+KQAWDDSV Sbjct: 61 LEALVAPIALYPDELLANVLAASTYPLEVVQADRWLKEHKSLKGDALKTEVEKQAWDDSV 120 Query: 120 KALASTADVLAMMSDKIDWTKNLGDAVLAQQPDVMDAIQRLRSKAQANNKLVTTKQQKVS 179 KALASTADVL MMSDK+DWTK+LGDAVLAQQPDVMDAIQRLR+KA N KLVTTKQQKVS Sbjct: 121 KALASTADVLTMMSDKLDWTKSLGDAVLAQQPDVMDAIQRLRTKAYDNKKLVTTKQQKVS 180 Query: 180 VQTQESKQVIVIEQTDPNTVYVPYYDPATVYGAWPYADYPPYYFGYPSYIGAGVIAAGLA 239 VQTQE+KQV+VIE +P T+YVPYY+PATVYGAWPYADYPPYYFGYPSYIGAGVIA GLA Sbjct: 181 VQTQENKQVVVIEPAEPGTMYVPYYEPATVYGAWPYADYPPYYFGYPSYIGAGVIAGGLA 240 Query: 240 FGAGWAIGRWGNYWGGGFNWGNRNVYVNNFNRVNNIGNSWQHNPAHRQGVRYNNSNVQQR 299 FG WAIGRWGNYWGGG NWGNRNVYVN +R NIGN WQHNPAHRQGVRYNN+NVQQR Sbjct: 241 FGTAWAIGRWGNYWGGGCNWGNRNVYVN--HRTTNIGNGWQHNPAHRQGVRYNNTNVQQR 298 Query: 300 FGGNANRAGASDRMDFRGRDGQQVLKPGGDRPG---ADRAGDRAGDR-GDRAGDRAGDRA 355 FG N +AGA+DRMDFRGRDGQQVLK DRPG ADRAGDRAGDR GDRAG R Sbjct: 299 FGNNNLKAGAADRMDFRGRDGQQVLK---DRPGAGAADRAGDRAGDRTGDRAGTRDRPGG 355 Query: 356 GDRGGDKKKKK 366 GDR G + K Sbjct: 356 GDRAGAADRAK 366 >ref|ZP_01048408.1| hypothetical protein NB311A_16474 [Nitrobacter sp. Nb-311A] gb|EAQ33616.1| hypothetical protein NB311A_16474 [Nitrobacter sp. Nb-311A] Length = 537 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 264/374 (70%), Positives = 303/374 (81%), Gaps = 11/374 (2%) Query: 8 MFRWGKTLLAVVLVSVTSVAATAQTADKPPAQASQPAAATTQPADQLLKPEQLEALVAPI 67 MFR G L+A+ L+ + +A +AQTAD P ++ A + +LLKPEQLEALVAPI Sbjct: 1 MFRCGNILIALTLLMASPIAVSAQTADNPLDTSTPQLATKSSYGAELLKPEQLEALVAPI 60 Query: 68 ALYPDSLLANVLAASTYPLEVVQADRWLKERKSLKGDALKAEVDKQAWDDSVKALASTAD 127 ALYPD LLANVLAASTYPLEVVQADRWLKERK+LKG AL +V+KQ+WD+S+KAL+ST D Sbjct: 61 ALYPDELLANVLAASTYPLEVVQADRWLKERKALKGYALMEQVEKQSWDNSIKALSSTPD 120 Query: 128 VLAMMSDKIDWTKNLGDAVLAQQPDVMDAIQRLRSKAQANNKLVTTKQQKVSVQTQESKQ 187 V++MMSDKIDWTK++GDAVLAQQ DVMDAIQRLRSKA N KLVTTKQQKVSVQTQE+KQ Sbjct: 121 VISMMSDKIDWTKSVGDAVLAQQADVMDAIQRLRSKAYDNKKLVTTKQQKVSVQTQENKQ 180 Query: 188 VIVIEQTDPNTVYVPYYDPATVYGAWPYADYPPYYFGYPSYIGAGVIAAGLAFGAGWAIG 247 IVIE P+T+YVPYY+PATVYG WPY +YPPYYFGYPSYIGAGVIA GLAFGAGWAIG Sbjct: 181 AIVIESASPDTMYVPYYNPATVYGTWPYTEYPPYYFGYPSYIGAGVIATGLAFGAGWAIG 240 Query: 248 RWGNYWGGGFNWGNRNVYVNNFNRVNNIGNSWQHNPAHRQGVRYNNSNVQQRFGGNANRA 307 RWGNYWGGGFNW NR++YVN++NR+NN+GNSWQH+PAHRQGVRYNN+NVQQRFG N RA Sbjct: 241 RWGNYWGGGFNWSNRSLYVNHYNRLNNVGNSWQHDPAHRQGVRYNNANVQQRFGNNNLRA 300 Query: 308 GASDRMDFRGRDGQQVLKPGGDRPG------ADRAGDRAGDRGDRAGDRAGDRAG----D 357 GAS+RMDFRGR GQQVL PG DRPG +DR+GDR R GDR G+R G Sbjct: 301 GASNRMDFRGRGGQQVLHPGQDRPGGGSRAASDRSGDRVASRDRPGGDR-GNRPGVADRV 359 Query: 358 RGGDKKKKKXRVAT 371 R GD+ K R A Sbjct: 360 RSGDRSKAGSRAAN 373 >ref|ZP_01048274.1| hypothetical protein NB311A_08854 [Nitrobacter sp. Nb-311A] gb|EAQ33765.1| hypothetical protein NB311A_08854 [Nitrobacter sp. Nb-311A] Length = 371 Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 195/339 (57%), Positives = 240/339 (70%), Gaps = 28/339 (8%) Query: 63 LVAPIALYPDSLLANVLAASTYPLEVVQADRWLKERKSLKGDALKAEVDKQAWDDSVKAL 122 +VAPIALYPD LL+ VL ASTYPLEVV++ RW+K +LKGDALKA VD+Q WD SVK+L Sbjct: 1 MVAPIALYPDPLLSQVLIASTYPLEVVESARWVKTNSNLKGDALKAAVDQQTWDQSVKSL 60 Query: 123 ASTADVLAMMSDKIDWTKNLGDAVLAQQPDVMDAIQRLRSKAQANNKLVTTKQQKVSVQT 182 A+T VL MMSDK+DWT+ LGDAVLAQQ DVMDA+QRLR++A ANNKL+TTKQQKV Sbjct: 61 AATPSVLQMMSDKLDWTQKLGDAVLAQQADVMDAVQRLRARADANNKLMTTKQQKVIKTK 120 Query: 183 QESKQVIVIEQTDPNTVYVPYYDPATVYGAWPYADYPPYYFGYPSYIGAGVIAAGLAFGA 242 + +K VIVIE +PNTVYVPYY+PA VYGAWPY+ YPPYY+G P Y+ IA G+AFGA Sbjct: 121 ENNKDVIVIEPAEPNTVYVPYYNPAVVYGAWPYSAYPPYYWGAPGYVAGAAIATGIAFGA 180 Query: 243 GWAI---GRWGNYWGGGFNWGNRNVYVNNFNRVNNI---------GNSWQHNPAHRQGVR 290 G+AI G WGGGF WGN N+ NFNR NI G +W H+PAHR GV+ Sbjct: 181 GYAIGRWTSGGWGWGGGFAWGNNNI---NFNRQININSNGNNFISGQTWHHDPAHRHGVQ 237 Query: 291 YNNSNVQQRFGGNANRAGASDRMDFRGRDGQQVLKP-GGDRPGADRAGDRAGDRGDRAGD 349 Y+N+ V+Q+F GN ++G ++RMDFRG +GQQVL+P G+RPG RG++AG+ Sbjct: 238 YHNAAVRQQFSGNRTQSGRAERMDFRGHNGQQVLRPDAGNRPG----------RGNKAGN 287 Query: 350 RAG-DRAG-DRGGDKKKKKXRVATAPAPATRPRAGAIAQ 386 R G DRAG D K + R A P A+R GA + Sbjct: 288 RPGSDRAGRDVANRGKARATRPANRPNAASRRHEGAFSH 326 >ref|NP_771815.1| hypothetical protein bll5175 [Bradyrhizobium japonicum USDA 110] dbj|BAC50440.1| bll5175 [Bradyrhizobium japonicum USDA 110] Length = 552 Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 185/398 (46%), Positives = 237/398 (59%), Gaps = 22/398 (5%) Query: 6 VAMFRWGKTLLAVVLVSVTSVAATAQTADKPPAQASQPAAATTQPADQLLKPEQLEALVA 65 V W L+ ++ SV S A T A + P+ A PA+ Q A LKP +L+ALVA Sbjct: 28 VRTICWTCGLIGLLCTSVPSQAQTNDNAPQAPSGA--PASVPEQAA---LKPAELDALVA 82 Query: 66 PIALYPDSLLANVLAASTYPLEVVQADRWLKERKSLKGDALKAEVDKQAWDDSVKALAST 125 PIALYPD+LL+NVL ASTYPLEVV ADRW+ + K L GDALKA +KQ WD SVKAL +T Sbjct: 83 PIALYPDTLLSNVLMASTYPLEVVHADRWMNQNKGLMGDALKAATEKQDWDGSVKALVAT 142 Query: 126 ADVLAMMSDKIDWTKNLGDAVLAQQPDVMDAIQRLRSKAQANNKLVTTKQQKVSVQTQES 185 VL MM++ ++WT+ LG+A LAQQ +VMDA+QRLRSKA KLVTT++Q V+V+ ++ Sbjct: 143 PSVLQMMNEHLEWTQKLGEAFLAQQQEVMDAVQRLRSKAYDRQKLVTTREQNVTVKEDQN 202 Query: 186 KQVIVIEQTDPNTVYVPYYDPATVYGAWPYADYPP--YYFGYPSYIGAGVIAAGLAFGAG 243 ++ I IE +++YVPYY+P V+G W Y+DYP YY+GYP YIGAG+IA G+AFGA Sbjct: 203 RRFIYIEPAVTDSIYVPYYEPQVVFGDWSYSDYPAYPYYWGYPGYIGAGIIATGIAFGAA 262 Query: 244 WAIGRWGNYWGGG---------FNWGNRNVYVNNFNRVNNIGNSWQHNPAHRQGVRYNNS 294 +A+GRW G NWG + +N RV + WQH+ HRQG RYNN Sbjct: 263 YALGRWATGGYWGGGGWWGGSRVNWGGGAIDINRGARVEH----WQHDVRHRQGARYNNP 318 Query: 295 NVQQRFGGNANRAGASDRMDFRGRDGQQVLKPGGDRPG-ADRAGDRAGDRGDRAGDRAGD 353 N+QQRFG RAGA G + L G +R ADRA RG+R AG Sbjct: 319 NLQQRFGSANRRAGAGIAAGAAGAAAARRLGTGANRANVADRAQRADRGRGNRQAG-AGR 377 Query: 354 RAGDRGGDKKKKKXRVATAPAPATRPRAGAIAQRPPTA 391 G+R + R A + A A A P A Sbjct: 378 TVGNRQARNRSTAARSARSGGRAVHRGASRAAHVRPVA 415