BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0075.0045.p         (145 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770122.1| hypothetical protein blr3482 [Bradyrhizobium ja...   214   3e-54
ref|YP_576204.1| hypothetical protein Nham_0879 [Nitrobacter ham...   186   8e-46
ref|ZP_01048382.1| hypothetical protein NB311A_10635 [Nitrobacte...   183   9e-45
ref|YP_578151.1| hypothetical protein Nham_2924 [Nitrobacter ham...   164   4e-39
ref|ZP_08630795.1| hypothetical protein CSIRO_3905 [Bradyrhizobi...   159   9e-38

>ref|NP_770122.1| hypothetical protein blr3482 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48747.1| blr3482 [Bradyrhizobium japonicum USDA 110]
          Length = 161

 Score =  214 bits (546), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 111/150 (74%), Positives = 120/150 (80%), Gaps = 6/150 (4%)

Query: 1   LSEQMHPAAPHHLPFFIPGADGSDTLMVVMGIFLVATVFWVGTLYWKLHSLPERMAHKSQ 60
           LSEQ+HP APHHLPF++    G DTLMVVMGIFL+ TV WVGTLYWKLHSLPERMAHKSQ
Sbjct: 11  LSEQLHPMAPHHLPFYLAPGSGVDTLMVVMGIFLIGTVLWVGTLYWKLHSLPERMAHKSQ 70

Query: 61  KLQFEIVAVLGLISLFTHMHIFWVAGLLLALIDLPDFGTPMRSIADSVERIADATPG-AA 119
           KLQFE VAVLGLISLFTHMHIFWVAGLLLALIDLPDFGTP+RSIA SVERIADATP  A 
Sbjct: 71  KLQFEFVAVLGLISLFTHMHIFWVAGLLLALIDLPDFGTPLRSIAGSVERIADATPSEAG 130

Query: 120 EPEAESVPDGSPDV-----RTPAKHEVHNH 144
           +  AES  D    +       PAK + H+H
Sbjct: 131 DVVAESQSDAGAGIPPTGKSGPAKEKEHSH 160


>ref|YP_576204.1| hypothetical protein Nham_0879 [Nitrobacter hamburgensis X14]
 gb|ABE61744.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 154

 Score =  186 bits (473), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 89/143 (62%), Positives = 110/143 (76%), Gaps = 11/143 (7%)

Query: 1   LSEQMHPAAPHHLPFFIPGADGSDTLMVVMGIFLVATVFWVGTLYWKLHSLPERMAHKSQ 60
           ++EQ+HP APHHLPF++   DG+D L+V MGIFLVA + WVGTLY +LHSLPERMAHKS+
Sbjct: 1   MNEQIHPIAPHHLPFYLAPGDGTDVLLVAMGIFLVAALIWVGTLYLRLHSLPERMAHKSE 60

Query: 61  KLQFEIVAVLGLISLFTHMHIFWVAGLLLALIDLPDFGTPMRSIADSVERIADA------ 114
           KLQFEIVA+LGL++LFTH+H+FWVAGLLLA+ID+PDFGTP+RSIA SVE+IAD       
Sbjct: 61  KLQFEIVAILGLLALFTHIHLFWVAGLLLAMIDIPDFGTPLRSIAGSVEKIADTKLDVGA 120

Query: 115 -----TPGAAEPEAESVPDGSPD 132
                   A+ P A   P+   D
Sbjct: 121 EEKREAKSASAPRAADSPEKKSD 143


>ref|ZP_01048382.1| hypothetical protein NB311A_10635 [Nitrobacter sp. Nb-311A]
 gb|EAQ33644.1| hypothetical protein NB311A_10635 [Nitrobacter sp. Nb-311A]
          Length = 161

 Score =  183 bits (464), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 91/139 (65%), Positives = 110/139 (79%), Gaps = 3/139 (2%)

Query: 1   LSEQMHPAAPHHLPFFIPGADGSDTLMVVMGIFLVATVFWVGTLYWKLHSLPERMAHKSQ 60
           ++E+MHP APHHLPF++   DG+D  +VVMGIFLVA +  VGTLY +LHSLPERMAHKS+
Sbjct: 1   MNEKMHPMAPHHLPFYLAPGDGTDISLVVMGIFLVAILVGVGTLYLRLHSLPERMAHKSE 60

Query: 61  KLQFEIVAVLGLISLFTHMHIFWVAGLLLALIDLPDFGTPMRSIADSVERIADATPGA-- 118
           KLQFEIVAVLGL++LFTH+H+FWVAGLLLA+ID+PDFGTP+R IA SVE+IAD    A  
Sbjct: 61  KLQFEIVAVLGLLALFTHIHLFWVAGLLLAMIDIPDFGTPLRRIAGSVEKIADTQSNAVV 120

Query: 119 -AEPEAESVPDGSPDVRTP 136
            +E EA S      D  TP
Sbjct: 121 ESEQEATSAVIPPADALTP 139


>ref|YP_578151.1| hypothetical protein Nham_2924 [Nitrobacter hamburgensis X14]
 gb|ABE63691.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 166

 Score =  164 bits (415), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/122 (63%), Positives = 94/122 (77%)

Query: 1   LSEQMHPAAPHHLPFFIPGADGSDTLMVVMGIFLVATVFWVGTLYWKLHSLPERMAHKSQ 60
           +SE +HP APH LP FI     +D LMV +G+ L+  V  VG +Y +LH++PERMAHKSQ
Sbjct: 1   MSELLHPNAPHDLPSFITAPGDTDVLMVAVGVILIGAVLAVGNIYLRLHTMPERMAHKSQ 60

Query: 61  KLQFEIVAVLGLISLFTHMHIFWVAGLLLALIDLPDFGTPMRSIADSVERIADATPGAAE 120
           KLQFEIVAVLGL++LFTH+H+FWVAGLLLA+IDLPDF TP+RSIA SV  IA   PGA  
Sbjct: 61  KLQFEIVAVLGLLALFTHIHLFWVAGLLLAMIDLPDFSTPLRSIASSVATIAGVQPGAEA 120

Query: 121 PE 122
           P 
Sbjct: 121 PR 122


>ref|ZP_08630795.1| hypothetical protein CSIRO_3905 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP06512.1| hypothetical protein CSIRO_3905 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 139

 Score =  159 bits (403), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 81/145 (55%), Positives = 105/145 (72%), Gaps = 6/145 (4%)

Query: 1   LSEQMHPAAPHHLPFFIPGADGSDTLMVVMGIFLVATVFWVGTLYWKLHSLPERMAHKSQ 60
           +S+ +H AAPHHLP FI     +D LMVV+G  L+A + +VG +Y ++HSLPERMAHKSQ
Sbjct: 1   MSDSLHSAAPHHLPSFITAPGDTDILMVVVGFILLAAILFVGNIYLQIHSLPERMAHKSQ 60

Query: 61  KLQFEIVAVLGLISLFTHMHIFWVAGLLLALIDLPDFGTPMRSIADSVERIADATPGAAE 120
           KLQFEIVAVL L++LFTH H+FWV  LLLA++DLPDF TP+RSIA SV+++A   P   +
Sbjct: 61  KLQFEIVAVLCLLALFTHNHLFWVIALLLAMVDLPDFSTPLRSIAGSVQKLAGIKP---D 117

Query: 121 PEAESVPDGSPDVRTPAKHEVHNHA 145
           P+    P    D+  PAK E  +HA
Sbjct: 118 PDPSEPPG---DLSPPAKSEEQHHA 139