BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0075.0037.p         (71 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770108.1| two-component response regulator [Bradyrhizobiu...    90   9e-17
ref|YP_576198.1| response regulator receiver domain-containing p...    85   4e-15
ref|YP_001314306.1| response regulator receiver protein [Sinorhi...    70   1e-10
gb|AEH82101.1| conserved hypothetical protein [Sinorhizobium mel...    65   3e-09
ref|NP_435755.2| hypothetical protein SMa0941 [Sinorhizobium mel...    65   5e-09

>ref|NP_770108.1| two-component response regulator [Bradyrhizobium japonicum USDA
           110]
 dbj|BAC48733.1| two-component response regulator [Bradyrhizobium japonicum USDA
           110]
          Length = 168

 Score = 90.1 bits (222), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 39/65 (60%), Positives = 53/65 (81%)

Query: 1   LDINLSDGSGIELRHRLADQGIKIPIIYITGNDSPATRMAAMASGCVAYLTKPFTANSLI 60
           LDINL   SGI+LR  LA+Q +++PI+++TGND+  +R AA+ASGC+AYLTKPF A SLI
Sbjct: 100 LDINLDGESGIDLRRWLAEQQVQVPIVFVTGNDTHESRAAAIASGCIAYLTKPFAAASLI 159

Query: 61  QPIER 65
           + +ER
Sbjct: 160 ESVER 164


>ref|YP_576198.1| response regulator receiver domain-containing protein [Nitrobacter
           hamburgensis X14]
 gb|ABE61738.1| response regulator receiver domain protein (CheY-like) [Nitrobacter
           hamburgensis X14]
          Length = 135

 Score = 84.7 bits (208), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 54/65 (83%)

Query: 1   LDINLSDGSGIELRHRLADQGIKIPIIYITGNDSPATRMAAMASGCVAYLTKPFTANSLI 60
           LDI+L++ SGI+L  +LA +G+K+P+I+ITGNDS A R AA+ S C+AYLTKPF+A SLI
Sbjct: 65  LDIDLNNESGIDLHRQLAGRGVKLPVIFITGNDSDANRSAAIDSRCIAYLTKPFSARSLI 124

Query: 61  QPIER 65
           + +++
Sbjct: 125 ESVKK 129


>ref|YP_001314306.1| response regulator receiver protein [Sinorhizobium medicae WSM419]
 gb|ABR64373.1| response regulator receiver protein [Sinorhizobium medicae WSM419]
          Length = 140

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/67 (52%), Positives = 43/67 (64%)

Query: 1   LDINLSDGSGIELRHRLADQGIKIPIIYITGNDSPATRMAAMASGCVAYLTKPFTANSLI 60
           LDI+LS  SGIEL HRL D   +I +I+IT  D       AM +GCVAYL KPF A++LI
Sbjct: 72  LDIHLSGMSGIELWHRLKDTDFRIKVIFITALDDGVLEAEAMKAGCVAYLHKPFPADALI 131

Query: 61  QPIERLL 67
             + R L
Sbjct: 132 GAVNRAL 138


>gb|AEH82101.1| conserved hypothetical protein [Sinorhizobium meliloti SM11]
          Length = 144

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%)

Query: 1   LDINLSDGSGIELRHRLADQGIKIPIIYITGNDSPATRMAAMASGCVAYLTKPFTANSLI 60
           LD++L D SG+ELR RL     ++P+I+IT  D  A  + A   GC+AYL KPF A SLI
Sbjct: 72  LDMHLVDMSGMELRRRLKTAHCRLPVIFITAIDDDALELEARRVGCLAYLQKPFAAASLI 131

Query: 61  QPIERLLA 68
             ++  LA
Sbjct: 132 AAVKEALA 139


>ref|NP_435755.2| hypothetical protein SMa0941 [Sinorhizobium meliloti 1021]
 gb|AAK65167.2| conserved hypothetical protein [Sinorhizobium meliloti 1021]
          Length = 127

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 43/68 (63%)

Query: 1   LDINLSDGSGIELRHRLADQGIKIPIIYITGNDSPATRMAAMASGCVAYLTKPFTANSLI 60
           LD++L D SG+ELR RL     ++P+I+IT  D  A  + A   GC+AYL KPF A SLI
Sbjct: 55  LDMHLVDMSGMELRRRLKTAHSRLPVIFITAIDDDALELEARRVGCLAYLQKPFAAASLI 114

Query: 61  QPIERLLA 68
             ++  LA
Sbjct: 115 AAVKEALA 122